Pairwise Sequence and Structure Alignment

Pairwise protein alignment (SIM) LALNVIEW alignment viewer program Pairwise DNA alignment (LFASTA) ACNUC at Lyon AMAS (analyse multiply aligned sequences) BCM Search Launcher (pairwise sequence alignment) DALI compare protein structures in 3D DIALIGN (aligment program without explicit gap penalties) Previous: Sequence Similarity Searches Next: Multiple Alignment and Phylogeny