CBS Bioinformatics Tools
The access to the tools listed below is free and unlimited for all academic
users. For other users the access is also free but limited. Please see
for the details of the access policy.
See also the services at
Generation of sequence-profile logos using PSI-blast.
DNA array tools
Tools for analysis of DNA microarray data.
Motif recognition in protein sequences by Gibbs sampler.
Development of neural network and weight matrix prediction methods
for protein sequences.
Extraction of sequence and annotation, e.g. intron/exon structure,
from GenBank entries and other GenBank format files.
Combining protein sequence-based information with structural data from
the Protein Data Bank (PDB).
Selecting an optimal microarray probe set to represent a gene
Visualizing structural sequence constraints.
Maximizing the number of characters that are present in gap-free columns
- alignment area - by selecting an optimal subset of sequences in an alignment.
Easy browsing and visualisation of MHC class I and II binding motifs.
Designing optimal primers for USER fusion.
Multiple alignment of coding DNA using protein level information.
RNA Structure Logos
Displaying structural RNA alignments.
Sequence logo generator.
A comprehensive tool for translating DNA sequences to the corresponding
Analysis of human immunoglobulin VDJ recombination.