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The Fourth Workshop Comparative Microbial Genomics and Taxonomy at the LNCC

Program for Brazil workshop 2009


Time Monday Tuesday Wednesday Thursday Friday
08.30-09.30 Opening - Fabiano Rob Rob Tom Presentation
09.30-10.30 David Ussery Rob Rob TBA preparation
10.30-11.00 Coffee break Coffee break Coffee break Coffee break Coffee break
11.00-12.30 Nei Pereira Jr. Tom Tom Rob Presentations
12.30-13.30 Lunch Lunch Lunch Lunch Lunch
13.30-14.30 Rob David Ussery David Ussery David Ussery Pesentations
14.30-15.30 Computer exercise 1 Computer exercise 2 Computer exercise 3 Computer exercise 4 Discussion
15.30-16.00 Coffee break Coffee break Coffee break Coffee break Coffee break
16.00-17.30 Computer exercise 1 Computer exercise 2 cont. Computer exercise 3 cont. Computer exercise 4 cont.
17.30-19.00 Dinner Dinner Dinner Dinner
19.00-21.00 Student project Student project Student project Student project


Monday 3rd of August

Time Who What
08.30-09.30 Fabiano Introduction - IV Workshop Comparative Microbial Genomics and Taxonomy
09.30-10.30 David Ussery "Too much information -or- How to Deal With Thousands of Genomes...."
10.30-11.00 Coffee break Coffee break
11.00-12.30 Nei Pereira Jr.
12.30-13.30 Lunch Lunch
13.30-14.30 David Ussery "Methods to Compare Genomes"
14.30-15.30 Karin Lagesen Computer exercise 1
15.30-16.00 Coffee break Coffee break
16.00-17.30 Karin Lagesen Computer exercise 1 cont. 
17.30-19.00 Dinner Dinner
19.00-21.00 Student project Student project - self work. This first day some of the tutors will be present.

Tuesday 4th of August

Time Who What
08.30-09.30 Rob Edwards
09.30-10.30 Rob Edwards
10.30-11.00 Coffee break Coffee break
11.00-12.30 Tom Coenye Polyphasic taxonomy in practice
12.30-13.30 Lunch Lunch
13.30-14.30 David Ussery 16S rRNA trees and BLAST matrices
14.30-15.30 Karin Lagesen Computer exercise 2
15.30-16.00 Coffee break Coffee break
16.00-17.30 Karin Lagesen Computer exercise 2 cont.
17.30-19.00 Dinner Dinner
19.00-21.00 Student project Student project

Wednesday 5th of August

Time Thursday Friday
08.30-09.30 Rob Edwards
09.30-10.30 Rob Edwards
10.30-11.00 Coffee break Coffee break
11.00-12.30 Tom Coenye Novel approaches to bacterial taxonomy
12.30-13.30 Lunch Lunch
13.30-14.30 David Ussery Bacterial pan-genomics
14.30-15.30 Rob Edwards Computer exercise 3
15.30-16.00 Coffee break Coffee break
16.30- Rob Edwards Computer exercise 3 cont.

Thursday 6th of August

Time Who What
08.30-09.30 Tom Coenye and Computer exercise 4
09.30-10.30 Karin Lagesen
 Computer exercise 4 cont.
10.30-11.00 Coffee break Coffee break
11.00-12.30 Rob Edwards
12.30-13.30 Lunch Lunch
13.30-14.30 David Ussery BLAST atlases
14.30-15.30 Karin Lagesen Computer exercise 4 cont.
15.30-16.00 Coffee break Coffee break
16.30- Karin Lagesen Computer exercise 4 cont.

Friday 7th of August

Time Who What
08.30-09.30 All Presentation preparation in the computer room
10.30-11.00 Coffee break Coffee break
11.00-12.30 All Presentations by students
12.30-13.30 Lunch Lunch
13.30-14.30 All Pesentations by students
15.00-15.30 All Discussion
15.30-16.00 Coffee break Coffee break
16.00-17.30 All Closing of the workshop