This directory contains the data used in the paper

``Protein structure and the sequential structure of  mRNA:  alpha-helix
and beta-sheet signals at the nucleotide  level'',  S.  Brunak  and  J.
Engelbrecht, Proteins, 25, 237-252, 1996. 

The directory contains 6 files. Each file contains either the  mRNA  or
the amino acid sequence, and  the  corresponding  eight  category  DSSP
assignment of the secondary structure of the associated protein. 
                
 nucall.seq  : 719 mRNA sequences, all organisms, redundant data set
 proall.seq  : 719 amino acid sequences, all organisms, redundant data set
 ebacnuc.seq : 44 mRNA enterobacterial sequences, non-redundant data set
 ebacpro.seq : 44 amino acid enterobacterial sequences, non-redundant data set
 mamnuc.seq  : 77 mRNA mammalian sequences, non-redundant data set
 mampro.seq  : 77 amino acid mammalian sequences, non-redundant data set

Direct questions to 

Soren Brunak, brunak@cbs.dtu.dk; or
Kristoffer Rapacki, rapacki@cbs.dtu.dk

Center for Biological Sequence Analysis
The Technical University of Denmark
Building 206
DK-2800 Lyngby, Denmark
WWW: http://www.cbs.dtu.dk/