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1997 (2) 1996 (4) 1995 (4) 1994 (4) 1993 (1) 1992 (2) 1991 and before (3)

1997

    A neural network method for identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites
    Nielsen H, Engelbrecht J, Brunak S, von Heijne G
    Int. J. Neur. Sys., 8, 581-599, 1997
    PubMed
    Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites
    Nielsen H, Engelbrecht J, Brunak S, von Heijne G
    Protein Eng., 10, 1-6, 1997
    PubMed

1996

    Protein structure and the sequential structure of mRNA: alpha-helix and beta-sheet signals at the nucleotide level
    Brunak S, Engelbrecht J
    Proteins, 25, 237-252, 1996, 1996
    PubMed
    Splice site prediction in Arabidopsis thaliana pre-mRNA by combining local and global sequence information
    Korning PG, Hebsgaard SM, Tolstrup N, Engelbrecht J, Rouzé P, Brunak S
    Nucleic Acids Res., 24, 3439-3452, 1996
    PubMed
    Protein structure and the sequential structure of mRNA: alpha-helix and beta-sheet signals at the nucleotide level
    Brunak S, Engelbrecht J
    Proteins, 25, 237-252, 1996
    Defining a similarity threshold for a functional protein sequence pattern: The signal peptide cleavage site
    Nielsen H, Engelbrecht J, von Heijne G, Brunak S
    Proteins, 24, 165-177, 1996
    PubMed

1995

    Investigations of Escherichia coli promoter sequences with artificial neural networks: New signals discovered upstream of the transcriptional startpoint
    Pedersen AG, Engelbrecht J
    Proceedings of the Third International Conference on Intelligent Systems for Molecular Biology (ISMB95), AAAI Press, 292-299, 1995
    PubMed
    Publication download
    Periodic sequence patterns in human exons
    Baldi P, Brunak S, Chauvin Y, Engelbrecht J, Krogh A
    Proceedings of the Third International Conference on Intelligent Systems for Molecular Biology (ISMB95), AAAI Press, 30-38, 1995
    PubMed
    Analysis of Eukaryotic Promoter Sequences reveals a systematically occurring CT-signal
    Larsen NI, Engelbrecht J, Brunak S
    Nucleic Acids Res., 23, 1223-1230, 1995
    PubMed
    Prediction of O-glycosylation of mammalian proteins: Specificity patterns of UDP-GalNAc:-polypeptide N-acetylgalactosaminyltransferase
    Hansen JE, Lund O, Engelbrecht J, Bohr H, Nielsen JO, Hansen JES, Brunak S
    Biochem. J., 308, 801-813, 1995
    PubMed

1994

    Neural network model of the genetic code is strongly correlated to the GES scale of amino acid transfer free energies
    Tolstrup N, Toftgård J, Engelbrecht J, Brunak S
    J Mol Biol. 1994 Nov 11;243(5):816-20., 1994
    PubMed
    Neural network model of the genetic code is strongly correlated to the GES scale of amino acid transfer free energies
    Tolstrup N, Toftgaard J, Engelbrecht J, Brunak S
    J. Mol. Biol., 243, 816-820, (Cover illustration), 1994
    Correlation between protein secondary structure and the mRNA nucleotide sequence
    Brunak S, Engelbrecht J, Kesmir C
    in ``Protein Structure by Distance Analysis'', H. Bohr and S. Brunak (eds.), 327-334, IOS Press, Amsterdam, 1994
    Hidden Markov Models for Human Genes
    Baldi P, Brunak S, Chauvin Y, Engelbrecht J, Krogh A
    in Advances in Neural Information Processing Systems, 6, 761-768, Morgan Kaufmann Pub, 1994

1993

    Computational Biosequence Analysis by Neural Networks
    Brunak S, Engelbrecht J
    Proceedings of the "Workshop on Physics and Computation, PhysComp 92", October 2-4, 1992, Dallas, Texas, 111-115, IEEE Computer Society Press, 1993

1992

    Multiple Alignment Using Simulated Annealing: Branch Point Definition in Human mRNA Splicing
    Lukashin AV, Engelbrecht J, Brunak S
    Nucleic Acids Res. 20, 2511-2516, 1992
    G/C rich tract in 5' end of human introns
    Engelbrecht J, Knudsen S, Brunak S
    J. Mol. Biol., 227, 108-113, 1992

1991

    Prediction of human mRNA donor and acceptor sites from the DNA sequence
    Brunak S, Engelbrecht J, Knudsen S
    J. Mol. Biol., 220, 49-65, 1991

1990

    Neural Network Detects Errors in the assignment of pre-mRNA splice sites
    Brunak S, Engelbrecht J, Knudsen S
    Nucleic Acids Res., 18, 4797-4801, 1990
    Cleaning up gene databases
    Brunak S, Engelbrecht J, Knudsen S
    Nature, 343, 123, 1990

1997 (2) 1996 (4) 1995 (4) 1994 (4) 1993 (1) 1992 (2) 1991 and before (3)