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2007
SNP mining porcine ESTs with MAVIANT, a novel tool for SNP evaluation and annotation
Panitz F, Stengaard H, Hornshøj H, Gorodkin J, Hedegaard J, Cirera S, Thomsen B, Madsen LB, Høj A, Vingborg RK, Zahn B, Wang X, Wang X, Wernersson R, Jørgensen CB, Scheibye-Knudsen K, Arvin T, Lumholdt S, Sawera M, Green T, Nielsen BJ, Havgaard JH, Brunak S, Fredholm M, Bendixen C
Bioinformatics. Jul 1;23(13):i387-91, 2007 |
PubMed
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Porcine transcriptome analysis based on 97 non-normalized cDNA libraries and assembly of 1,021,891 expressed sequence tags
Gorodkin J, Cirera S, Hedegaard J, Gilchrist MJ, Panitz F, Jørgensen C, Scheibye-Knudsen K, Arvin T, Lumholdt S, Sawera M, Green T, Nielsen BJ, Havgaard JH, Rosenkilde C, Wang J, Li H, Li R, Liu B, Hu S, Dong W, Li W, Yu J, Wang J, Staerfeldt HH, Wernersson R, Madsen LB, Thomsen B, Hornshøj H, Bujie Z, Wang X, Wang X, Bolund L, Brunak S, Yang H, Bendixen C, Fredholm M
Genome Biol. 8(4):R45, 2007 |
PubMed
Web
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2005
Pigs in sequence space: a 0.66X coverage pig genome survey based on shotgun sequencing
Wernersson R, Schierup MH, Jorgensen FG, Gorodkin J, Panitz F, Staerfeldt HH, Christensen OF, Mailund T, Hornshoj H, Klein A, Wang J, Liu B, Hu S, Dong W, Li W, Wong GK, Yu J, Wang J, Bendixen C, Fredholm M, Brunak S, Yang H, Bolund L
BMC Genomics, 6, 70, 2005 |
PubMed
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2001
Recognition of environmental and genetic effects on barley phenolic fingerprints by neural networks
Gorodkin J, Sogaard B, Bay H, Doll H, Kolster P, Brunak S
Comput Chem., 25, 301-7, 2001 |
PubMed
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1999
MatrixPlot: visualizing sequence constraints
Gorodkin J, Stærfeldt HH, Lund O, Brunak S
Bioinformatics, 15 769-770, 1999 |
PubMed
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Using Sequence Motifs for Enhanced Neural Network Prediction of Protein Distance Constraints
Gorodkin J, Lund O, Andersen CA, Brunak S
Proceedings of the seventh international conference on Intelligent Systems for Molecular Biology (ISMB \'99), AAAI Press, 95-105, 1999 |
PubMed
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1998
Computational Applications of DNA Structural Scales
Baldi P, Brunak S, Chauvin Y, Gorodkin J, Pedersen AG
Proceedings of the Sixth International Conference on Intelligent Systems for Molecular Biology (ISMB98), 35-42, 1998 |
PubMed
Publication download
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1997
Displaying the information contents of structural RNA alignments: the structure logos
Gorodkin J, Heyer LJ, Brunak S, Stormo GD
Comput. Appl. Biosci., 13, 583-586, 1997 |
PubMed
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Finding the most significant common sequences and structure motifs in a set of RNA sequences
Gorodkin J, Heyer LJ, Stormo GD
Nucleic Acids Res., 25, 3724-3732, 1997 |
PubMed
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Protein distance constraints predicted by neural networks and probability density functions
Lund O, Frimand K, Gorodkin J, Bohr H, Bohr J, Hansen J, Brunak S
Protein Eng., 10, 1241-1248, 1997 |
PubMed
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Finding Common Sequence and Structure Motifs in a Set of RNA Sequences
Gorodkin J, Heyer LJ, Stormo G
Proceedings of the Fifth International Conference on Intelligent Systems for Molecular Biology (ISMB97), 120-123, 1997 |
PubMed
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This file was last modified Friday 31st 2013f May 2013 08:37:15 GMT |
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