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2008 (1) 2007 (4) 2006 (3) 2005 (5) 2004 (2) 2003 (1) Books (1)

2008

    Global features of the Alcanivorax borkumensis SK2 genome
    Reva ON, Hallin PF, Willenbrock H, Sicheritz-Ponten T, Tummler B, Ussery DW
    Environ Microbiol. 2008 Mar;10(3):614-25 and Mol Genet Genomics, 279:523-534, (2008), 2008
    PubMed

2007

    Characterization of probiotic Escherichia coli isolates with a novel pan-genome microarray
    Willenbrock H, Hallin PF, Wassenaar TM, Ussery DW
    Genome Biol 8:R267 (2007), 2007
    PubMed
    Functional Associations by Response Overlap (FARO), a functional genomics approach matching gene expression phenotypes
    Nielsen HB, Mundy J, Willenbrock H
    PLoS ONE. Aug 1;2:e676, 2007
    PubMed
    Prediction of highly expressed genes in microbes based on chromatin accessibility
    Willenbrock H, Ussery DW
    BMC Mol Biol., 8 (1), 11, 2007
    PubMed
    Link to BMC Molecular Biology file
    Improving comparability between microarray probe signals by thermodynamic intensity correction
    Bruun GM, Wernersson R, Juncker AS, Willenbrock H, Nielsen HB
    Nucleic Acids Research, doi:10.1093/nar/gkl1098, 2007
    PubMed
    Web

2006

    DNA Microarrays in Comparative Genomics and Transcriptomics
    Willenbrock H
    Ph.D. thesis, 2006
    Design of a 7 Genomes Escherichia coli Microarray for Comparative Genomic Profiling
    Willenbrock H, Petersen A, Sekse C, Kiil K, Wasteson Y, Ussery DW
    Journal of Bacteriology, 188:7713-7721, 2006
    PubMed
    An environmental signature for 323 microbial genomes based on codon adaptation indices
    Willenbrock H, Friis C, Juncker AS, Ussery DW
    Genome Biology, 7, R114, 2006
    PubMed

2005

    Genome update: Sigma factors in 240 bacterial genomes
    Kiil K, Binnewies TT, Sicheritz-Pontén T, Willenbrock H, Hallin PF, Wassenaart TM, Ussery DW
    Microbiology-SGM, 151, 3147-3150, 2005
    PubMed
    A comparison study: Applying segmentation to array CGH data for downstream analyses
    Willenbrock H, Fridlyand J
    Bioinformatics, 21, 4084-4091, 2005
    PubMed
    Genome update: Distribution of two.component trensduction systems in 250 bacterial genomes
    Kiil K, Ferchaud JB, David C, Binnewies T, Wu H, Sicheritz-Pontén T, Willenbrock H, Ussery DW
    Microbiology, 151, 3447-3452, 2005
    PubMed
    Genome update: 2D clustering of bacterial genomes
    Willenbrock H, Binnewies TT, Hallin PF, Ussery DW
    Microbiology, 151, 333-6, 2005
    PubMed
    Genome update: base skews in 200+ bacterial chromosomes
    Hallin PF, Nielsen N, Devine KM, Binnewies TT, Willenbrock H, Ussery DW
    Microbiology, 151, 633-7, 2005
    PubMed

2004

    Chromatin architecture and gene expression in Escherichia coli
    Willenbrock H, Ussery DW
    Genome Biology, 5, 252, 2004
    PubMed
    Prediction of immunophenotype, treatment response, and relapse in childhood acute lymphoblastic leukemia using DNA microarrays
    Willenbrock H, Juncker AS, Schmiegelow K, Knudsen S, Ryder LP
    Leukemia, 18, 1270-7, 2004
    PubMed

2003

    Prediction of lipoprotein signal peptides in Gram-negative bacteria
    Juncker AS, Willenbrock H, Von Heijne G, Brunak S, Nielsen H, Krogh A
    Protein Science,12, 1652-62, 2003
    PubMed


Books

    Comparative Genomics of Pseudomonas
    Kiil K, Binnewies TT, Willenbrock H, Hansen SK, Yang L, Jelsbak L, Ussery DW, Friis C
    Chapter 1 in Pseudomonas: Model Organism, Pathogen, Cell Factory, (Edited by: B. H. A. Rehm, Wiley-VCH, 2008), 2008
    Link to publisher

2008 (1) 2007 (4) 2006 (3) 2005 (5) 2004 (2) 2003 (1) Books (1)