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2010
Proteome analysis of pod and seed development in the model legume Lotus japonicus
Nautrup-Pedersen G, Dam S, Laursen BS, Siegumfeldt AL, Nielsen K, Goffard N, Stærfeldt HH, Friis C, Sato S, Tabata S, Lorentzen A, Roepstorff P, Stougaard J
J Proteome Res, November 5, 2010 |
PubMed
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The Genome Atlas Resource
Qureshi M, Rotenberg E, Staerfeldt HH, Hansson L, Ussery DW
CSBio 2010 Proceedings, 115: 149-158, 2010 |
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2009
GeneWiz browser: An Interactive Tool for Visualizing Sequenced Chromosomes
Hallin PF, Stærfeldt HH, Rotenberg E, Binnewies TT, Benham CJ, , Ussery DW
Standards in Genomic Sciences, 1:204-215, 2009 |
Relevant URL
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The proteome of seed development in the model legume Lotus japonicus.
Dam S, Laursen BS, Ornfelt JH, Jochimsen B, Stærfeldt HH, Friis C, Nielsen K, Goffard N, Besenbacher S, Krusell L, Sato S, Tabata S, Thogersen IB, Enghild JJ, Stougaard J
Plant Physiology, 2009, 7 January, 2009 |
PubMed
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2007
Porcine transcriptome analysis based on 97 non-normalized cDNA libraries and assembly of 1,021,891 expressed sequence tags
Gorodkin J, Cirera S, Hedegaard J, Gilchrist MJ, Panitz F, Jørgensen C, Scheibye-Knudsen K, Arvin T, Lumholdt S, Sawera M, Green T, Nielsen BJ, Havgaard JH, Rosenkilde C, Wang J, Li H, Li R, Liu B, Hu S, Dong W, Li W, Yu J, Wang J, Staerfeldt HH, Wernersson R, Madsen LB, Thomsen B, Hornshøj H, Bujie Z, Wang X, Wang X, Bolund L, Brunak S, Yang H, Bendixen C, Fredholm M
Genome Biol. 8(4):R45, 2007 |
PubMed
Web
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RNAmmer: consistent and rapid annotation of ribosomal RNA genes
Lagesen K, Hallin P, Rødland EA, Stærfeldt HH, Rognes T, Ussery DW
Nucleic Acids Research 35:3100-3108,(2007)., 2007 |
PubMed
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2006
FeatureMap3D - a tool to map protein features and sequence conservation onto homologous structures in the PDB
Wernersson R, Rapacki K, Staerfeldt HH, Sackett PW, Mølgaard A
Nucleic Acids Res. Jul 1;34(Web Server issue):W84-8, 2006 |
PubMed
Web
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Origin of Replication in Circular Prokaryotic Chromosomes
Worning P, Jensen LJ, Hallin PF, Stærfeldt HH, Ussery DW
Environ Microbiol, 8, 353-61, 2006 |
PubMed
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2005
Pigs in sequence space: a 0.66X coverage pig genome survey based on shotgun sequencing
Wernersson R, Schierup MH, Jorgensen FG, Gorodkin J, Panitz F, Staerfeldt HH, Christensen OF, Mailund T, Hornshoj H, Klein A, Wang J, Liu B, Hu S, Dong W, Li W, Wong GK, Yu J, Wang J, Bendixen C, Fredholm M, Brunak S, Yang H, Bolund L
BMC Genomics, 6, 70, 2005 |
PubMed
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Genome Update: proteome comparisons
Binnewies TT, Hallin PF, Staerfeldt HH, Ussery DW
Microbiology, 151, 1-4, 2005 |
PubMed
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2004
Genome update: correlation of bacterial genomic properties
Hallin PF, Coenye T, Binnewies TT, Jarmer H, Staerfeldt HH, Ussery DW
Microbiology, 150, 3899-903, 2004 |
PubMed
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2003
Prediction of human protein function according to Gene Ontology categories
Jensen LJ, Gupta R, Stærfeldt HH, Brunak S
Bioinformatics, 19, 635-642, 2003 |
PubMed
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2002
The Atlas Visualisation of Genome-wide Information
Skovgaard M, Jensen LJ, Friis C, Stærfeldt H-H, Worning P, Brunak S, Ussery D
Methods in Microbiology, 33, 49-63, 2002 |
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Bias of purine stretches in sequenced chromosomes
Ussery D, Soumpasis DM, Brunak S, Stærfeldt HH, Worning P, Krogh A
Computers and Chemistry, 26, 531-541, 2002 |
PubMed
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Prediction of human protein function from post-translational modifications and localization features
Jensen LJ, Gupta R, Blom N, Devos D, Tamames J, Kesmir C, Nielsen H, Stærfeldt HH, Rapacki K, Workman C, Andersen CAF, Knudsen S, Krogh A, Valencia A, Brunak S
J. Mol. Biol., 319, 1257-1265, 2002 |
PubMed
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2000
A DNA structural atlas for Escherichia coli
Pedersen AG, Jensen LJ, Stærfeldt H, Brunak S, Ussery DW
J. Mol.Biol., 299, 907-930, 2000 |
PubMed
Publication download
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1999
MatrixPlot: visualizing sequence constraints
Gorodkin J, Stærfeldt HH, Lund O, Brunak S
Bioinformatics, 15 769-770, 1999 |
PubMed
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This file was last modified Friday 31st 2013f May 2013 08:37:15 GMT |
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