 |
|
2011
SignalP 4.0: discriminating signal peptides from transmembrane regions
Petersen TN, Brunak S, von Heijne G, Nielsen H
Nature Methods, 8:785-786, 2011 |
PubMed
Relevant URL
|
2007
Locating proteins in the cell using TargetP, SignalP and related tools
Emanuelsson O, Brunak S, von Heijne G, Nielsen H
Nature Protoc. 2, 953-971, 2007 |
|
2006
An overabundance of phase 0 introns immediately after the start codon in eukaryotic genes
Nielsen H, Wernersson R
BMC Genomics 7, 256, 2006 |
PubMed
Web
|
2005
Prediction of twin-arginine signal peptides
Bendtsen JD, Nielsen H, Widdick D, Palmer T, Brunak S
BMC Bioinformatics, 2,6, 167, 2005 |
PubMed
|
2004
Improved prediction of signal peptides: SignalP 3,0
Bendtsen JD, Nielsen H, von Heijne G, Brunak S
J Mol biol, 16;340, 783-95, 2004 |
PubMed
|
Blood cell gene expression profiling in rheumatoid arthritis; Discriminative genes and effect of rheumatoid factor
Bovin LF, Rieneck K, Workman C, Nielsen H, Sorensen SF, Skjodt H, Florescu A, Brunak S, Bendtzen K
Immunology Letters, 93, 217-26, 2004 |
PubMed
|
2003
Prediction of lipoprotein signal peptides in Gram-negative bacteria
Juncker AS, Willenbrock H, Von Heijne G, Brunak S, Nielsen H, Krogh A
Protein Science,12, 1652-62, 2003 |
PubMed
|
2002
Prediction of human protein function from post-translational modifications and localization features
Jensen LJ, Gupta R, Blom N, Devos D, Tamames J, Kesmir C, Nielsen H, Stærfeldt HH, Rapacki K, Workman C, Andersen CAF, Knudsen S, Krogh A, Valencia A, Brunak S
J. Mol. Biol., 319, 1257-1265, 2002 |
PubMed
|
2000
Predicting subcellular localization of proteins based on their N-terminal amino acid sequence
Emmanuelsson O, Nielsen H, Brunak S, von Heijne G
J. Mol. Biol., 300, 1005-1016, 2000 |
PubMed
|
Assessing the Accuracy of Prediction Algorithms for Classification: An Overview
Baldi P, Brunak S, Chauvin Y, Nielsen H, Andersen CAF
Bioinformatics, 16, 412-424, 2000 |
PubMed
|
1999
From sequence to sorting: Prediction of signal peptides
Nielsen H
PhD thesis, 1999 |
|
ChloroP, a neural network-based method for predicting chloroplast transit peptides and their cleavage sites
Emanuelsson O, Nielsen H, von Heijne G
Protein Science., 8, 978-984, 1999 |
PubMed
|
Competition between Sec- and TAT-dependent protein translocation in Escherichia coli
Cristóbal S, de Gier J-W, Nielsen H, von Heijne G
EMBO Journal, 18, 2982-2990, 1999 |
PubMed
|
Measures on Hidden Markov Models
Lyngsø RB, Pedersen CNS, Nielsen H
BRICS Report Series, RS-99-6, February, 1999 |
|
Metrics and Similarity Measures for Hidden Markov Models
Lyngsø RB, Pedersen CNS, Nielsen H
Proceedings of the seventh international conference on Intelligent Systems for Molecular Biology (ISMB \'99), AAAI Press, 178-186, 1999 |
PubMed
|
Machine learning approaches to the prediction of signal peptides and other protein sorting signal (review)
Nielsen H, Brunak S, von Heijne G
Protein Eng., 12, 3-9, 1999 |
PubMed
|
1998
Prediction of signal peptides and signal anchors by a hidden Markov model
Nielsen H, Krogh A
Proceedings of the Sixth International Conference on Intelligent Systems for Molecular Biology (ISMB98), 122-130, 1998 |
PubMed
|
1997
A neural network method for identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites
Nielsen H, Engelbrecht J, Brunak S, von Heijne G
Int. J. Neur. Sys., 8, 581-599, 1997 |
PubMed
|
Neural Network Prediction of Translation Initiation Sites in Eukaryotes: Perspectives for EST and Genome analysis
Pedersen AG, Nielsen H
Proceedings of the Fifth International Conference on Intelligent Systems for Molecular Biology (ISMB97), 226-233, 1997 |
PubMed
Publication download
|
Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites
Nielsen H, Engelbrecht J, Brunak S, von Heijne G
Protein Eng., 10, 1-6, 1997 |
PubMed
|
1996
Defining a similarity threshold for a functional protein sequence pattern: The signal peptide cleavage site
Nielsen H, Engelbrecht J, von Heijne G, Brunak S
Proteins, 24, 165-177, 1996 |
PubMed
|
The gntP Gene of Escherichia coli Involved in Gluconate Uptake
Klemm P, Tong S, Nielsen H, Conway T
J. of Bacteriol, 178, 61-67, 1996 |
PubMed
|
1993
Books
Signal peptides and protein localization prediction
Nielsen H
Encyclopedia of Genetics, Genomics, Proteomics and Bioinformatics, M.J. Dunn, L.B. Jorde, P.F.R. Little, S. Subramaniam (eds.), Wiley, 2005 |
|
|
|
This file was last modified Friday 31st 2013f May 2013 08:37:15 GMT |
|
|
|
