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2011
Microbial community structure of Arctic multiyear sea ice and surface seawater by 454 sequencing of the 16S RNA gene
Bowman JS, Rasmussen S, Blom N, Deming JW, Rysgaard S, Sicheritz-Ponten T
ISME J, Jun 30, 2011 |
PubMed
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2009
Kinase-specific prediction of protein phosphorylation sites.
Miller ML, Blom N
Methods in Molecular Biology, 2009;527:299-310, 2009 |
PubMed
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2008
NetPhosBac - A predictor for Ser/Thr phosphorylation sites in bacterial proteins.
Miller ML, Soufi B, Jers C, Blom N, Macek B, Mijakovic I
Proteomics. 2008 Dec 3, 2008 |
PubMed
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Linear motif atlas for phosphorylation-dependent signaling.
Miller ML, Jensen LJ, Diella F, Jørgensen C, Tinti M, Li L, Hsiung M, Parker SA, Bordeaux J, Sicheritz-Ponten T, Olhovsky M, Pasculescu A, Alexander J, Knapp S, Blom N, Bork P, Li S, Cesareni G, Pawson T, Turk BE, Yaffe MB, Brunak S, Linding R
Science Signaling, 2008 Sep 2;1(35):ra2, 2008 |
PubMed
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2007
Motif decomposition of the phosphotyrosine proteome reveals a new N-terminal binding motif for SHIP2
Miller ML, Hanke S, Hinsby AM, Friis C, Brunak S, Mann M, Blom N
Mol Cell Proteomics (in press), 2007 |
PubMed
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Midbrain expression of Delta-like 1 homologue is regulated by GDNF and is associated with dopaminergic differentiation
Christophersen NS, Gronborg M, Petersen TN, Fjord-Larsen L, Jorgensen JR, Juliusson B, Blom N, Rosenblad C, Brundin P
Exp Neurol., (in press), 2007 |
PubMed
|
Prediction of protein phosphorylation sites in yeast
Ingrell CR, Miller ML, Jensen ON, Blom N
Bioinformatics, 1;23(7):895-7, 2007 |
PubMed
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2006
Identification of novel genes regulated in the developing human ventral mesencephalon
Jorgensen JR, Juliusson B, Henriksen KF, Hansen C, Knudsen S, Petersen TN, Blom N, Seiger A, Wahlberg LU
Experimental neurology, 198(2):427-37, 2006 |
PubMed
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2004
Phospho.ELM: a database of experimentally verified phosphorylation sites in eukaryotic proteins
Diella F, Cameron S, Gemünd C, Linding R, Via A, Kuster B, Sicheritz-Pontén T, Blom N, Gibson TJ
BMC Bioinformatics. Jun 22;5:79, 2004 |
PubMed
|
NetAcet: prediction of N-terminal acetylation sites
Kiemer L, Bendtsen JB, Blom N
Bioinformatics, 1;21, 1269-70, 2004 |
PubMed
|
Feature-based prediction of non-classical and leaderless protein secretion
Bendtsen JD, Jensen LJ, Blom N, Von Heijne G, Brunak S
Protein Engineering Design and Selection, 17, 349-56, 2004 |
PubMed
|
Coronavirus 3CLpro proteinase cleavage sites: possible relevance to SARS virus pathology
Kiemer L, Lund O, Brunak S, Blom N
BMC Bioinformatics, 6;5, 72, 2004 |
PubMed
|
Identification of phosphorylation sites in protein kinase A substrates using artificial neural networks and mass spectrometry
Hjerrild M, Stensballe A, Rasmussen TE, Kofoed CB, Blom N, Sicheritz-Ponten T, Larsen MR, Brunak S, Jensen ON, Gammeltoft S
J Proteome Research 426-33, 2004 |
PubMed
|
Prediction of post-translational glycosylation and phosphorylation of proteins from the amino acid sequence
Blom N, Sicheritz-Ponten T, Gupta R, Gammeltoft S, Brunak S
Proteomics, 4, 1633-49, 2004 |
PubMed
|
Prediction of proprotein convertase cleavage sites
Duckert P, Brunak S, Blom N
Protein Engineering, Design & Selection, 17, 107-112, 2004 |
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2002
Prediction of human protein function from post-translational modifications and localization features
Jensen LJ, Gupta R, Blom N, Devos D, Tamames J, Kesmir C, Nielsen H, Stærfeldt HH, Rapacki K, Workman C, Andersen CAF, Knudsen S, Krogh A, Valencia A, Brunak S
J. Mol. Biol., 319, 1257-1265, 2002 |
PubMed
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2000
In vivo protection of nigral dopamine neurons by lentiviral gene transfer of the novel GDNF-family member neublastin/artemin
Rosenblad C, Gronborg M, Hansen C, Blom N, Meyer M, Johansen J, Dago L, Kirik D, Patel UA, Lundberg C, Trono D, Bjorklund A, Johansen TE
Mol Cell Neurosci, 15, 199-214 (Erratum in: Mol Cell Neurosci 2001, 18, 332-3), 2000 |
PubMed
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1999
Sequence and structure-based prediction of eukaryotic protein phosphorylation sites
Blom N, Gammeltoft S, Brunak S
J. Mol. Biol., 294, 1351-1362, 1999 |
PubMed
|
PhosphoBase, a database of phosphorylation sites: release 2.0
Kreegipuu A, Blom N, Brunak S
Nucleic Acids Res., 27, 237-239, 1999 |
PubMed
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1998
Statistical analysis of protein kinase specificity determinants
Kreegipuu A, Blom N, Brunak S, Järv J
FEBS Letters, 430, 45-50, 1998 |
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PhosphoBase: a database of phosphorylation sites
Blom N, Kreegipuu A, Brunak S
Nucleic Acids Res., 26, 384-386, 1998 |
PubMed
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1996
Cleavage site analysis in picornaviral polyproteins: Discovering cellular targets with neural networks
Blom N, Hansen J, Blaas D, Brunak S
Protein Sci., 5, 2203-2216, 1996 |
PubMed
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This file was last modified Friday 31st 2013f May 2013 08:37:15 GMT |
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