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2013
Precision mapping of the human O-GalNAc glycoproteome through SimpleCell technology
Steentoft C, Vakhrushev SY, Joshi HJ, Kong Y, Vester-Christensen MB, Schjoldager KT, Lavrsen K, Dabelsteen S, Pedersen NB, Marcos-Silva L, Gupta R, Paul Bennett E, Mandel U, Brunak S, Wandall HH, Levery SB, Clausen H
EMBO J. 2013 Apr 12. doi: 10.1038/emboj.2013.79., 2013 |
PubMed
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HExpoChem: a systems biology resource to explore human exposure to chemicals.
Taboureau O, Jacobsen UP, Kalhauge C, Edsgärd D, Rigina O, Gupta R, Audouze K
Bioinformatics., 2013 |
PubMed
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2012
Genome-wide analysis of cytogenetic aberrations in ETV6/RUNX1-positive childhood acute lymphoblastic leukaemia
Borst L, Wesolowska A, Joshi T, Borup R, Nielsen FC, Andersen MK, Jonsson OG, Wehner PS, Wesenberg F, Frost B-M, Gupta R, Schmiegelow K
British Journal of Haematology 2012 Mar;, 2012 |
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A genome-wide association study of men with symptoms of testicular dysgenesis syndrome and its network biology interpretation.
Dalgaard MD, Weinhold N, Edsgärd D, Silver JD, Pers TH, Nielsen JE, Jørgensen N, Juul A, Gerds TA, Giwercman A, Giwercman YL, Cohn-Cedermark G, Virtanen HE, Toppari J, Daugaard G, Jensen TS, Brunak S, Rajpert-De Meyts E, Skakkebæk NE, Leffers H, Gupta R
Journal of Medical Genetics, 2012 |
Relevant URL
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2011
An Aboriginal Australian Genome Reveals Separate Human Dispersals into Asia
Rasmussen M, Guo X, Wang Y, Lohmueller KE, Rasmussen S, Albrechtsen A, Skotte L, Lindgren S, Metspalu M, Jombart T, Kivisild T, Zhai W, Eriksson A, Manica A, Orlando L, De La Vega F, Tridico S, Metspalu E, Nielsen K, Ávila-Arcos MA, Moreno-Mayar JV, Muller C, Dortch J, Gilbert MTP, Lund O, Wesolowska A, Karmin M, Weinert LA, Wang B, Li J, Tai S, Xiao F, Hanihara T, van Driem G, Jha AR, Ricaut FX, de Knijf P, Migliano AB, Gallego-Romero I, Kristiansen K, Lambert DM, Brunak S, Forster P, Brinkmann B, Nehlich O, Bunce M, Richards M, Gupta R, Bustamante CD, Krogh A, Foley RA, Lahr MM, Balloux F, Sichertitz-Pontén T, Villems R, Nielsen R, Jun W, Willerslev E
Science, 2011 |
PubMed
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Cost-effective multiplexing before capture allows screening of 25 000 clinically relevant SNPs in childhood acute lymphoblastic leukemia
Wesolowska A, Dalgaard MD, Borst L, Gautier L, Bak M, Weinhold N, Nielsen BF, Helt LR, Audouze K, Nersting J, Tommerup N, Brunak S, Sicheritz-Ponten T, Leffers H, Schmiegelow K, Gupta R
Leukemia, June 25th, 2011 |
PubMed
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2010
Prediction of Glycosylation Sites in Proteins
Julenius K, Johansen M, Zhang Y, Brunak S, Gupta R
Bioinformatics for Glycobiology and Glycomics, 2010 |
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Protein annotation in the era of personal genomics
Blicher T, Gupta R, Wesolowska A, Jensen LJ, Brunak S
Curr Opin Struct Biol, 2010 Apr 17, 2010 |
PubMed
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Ancient Human Genome Sequence of an Extinct Palaeo-Eskimo
Rasmussen M, Li Y, Lindgreen S, Pedersen JS, Albrechtsen A, Moltke I, Metspalu M, Metspalu E, Kivisild T, Gupta R, Bertalan M, Nielsen K, Gilbert MTP, Wang Y, Raghavan M, Campos PF, Kamp HM, Wilson AS, Gledhill A, Tridico S, Bunce M, Lorenzen ED, Binladen J, Guo X, Zhao J, Zhang X, Zhang H, Li Z, Chen M, Orlando L, Kristiansen K, Bak M, Tommerup N, Bendixen C, Pierre TL, Grønnow B, Meldgaard M, Andreasen C, Fedorova SA, Osipova LP, Higham TFG, Ramsey CB, Hansen TV, Nielsen FC, Crawford MH, Brunak S, Sicheritz-Ponten T, Villems R, Nielsen R, Krogh A, Wang J, Willerslev E
Nature 11 Feb;463(7282):757-62, 2010 |
PubMed
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2004
Prediction, conservation analysis, and structural characterization of mammalian mucin-type O-glycosylation sites
Julenius K, Mølgaard A, Gupta R, Brunak S
Glycobiology, 15, 153-164, 2004 |
PubMed
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Analysis and prediction of leucine-rich nuclear export signals
La Cour T, Kiemer L, Mølgaard A, Gupta R, Skriver K, Brunak S
Protein Engineering Design and Selection, 17, 527-36, 2004 |
PubMed
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Prediction of post-translational glycosylation and phosphorylation of proteins from the amino acid sequence
Blom N, Sicheritz-Ponten T, Gupta R, Gammeltoft S, Brunak S
Proteomics, 4, 1633-49, 2004 |
PubMed
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2003
Plasmodium falciparum merozoite surface protein 1
Hoessli DC, Poincelet M, Gupta R, Ilangumaran S, Nasir-ud-Din
Eur J Biochem., 270, 366-75, 2003 |
PubMed
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Prediction of human protein function according to Gene Ontology categories
Jensen LJ, Gupta R, Stærfeldt HH, Brunak S
Bioinformatics, 19, 635-642, 2003 |
PubMed
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NESbase version 1.0: a database of nuclear export signals
La Cour T, Gupta R, Rapacki K, Skriver K, Poulsen FM, Brunak S
Nucleic Acids Res., 31,393-6, 2003 |
PubMed
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2002
Prediction of human protein function from post-translational modifications and localization features
Jensen LJ, Gupta R, Blom N, Devos D, Tamames J, Kesmir C, Nielsen H, Stærfeldt HH, Rapacki K, Workman C, Andersen CAF, Knudsen S, Krogh A, Valencia A, Brunak S
J. Mol. Biol., 319, 1257-1265, 2002 |
PubMed
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Prediction of glycosylation across the human proteome and the correlation to protein function
Gupta R, Brunak S
PSB-2002 Proceedings, Pacific Symposium on Biocomputing 310-322, 2002 |
PubMed
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2001
On the estimation of number of events required for saturation mutagenesis of large genomes
Phogat SK, Gupta R, Burma PK, Sen K, Pental D
Curr. Sci., 80, 823-824, 2001 |
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Prediction of glycosylation sites in proteomes: from post-translational modifications to protein function
Gupta R
Ph.D. thesis, 2001 |
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Orphan protein function and its relation to glycosylation
Gupta R, Jensen LJ, Brunak S
Ernst Schering Research Foundation Proceedings, 38, Chapter 13, Springer-Verlag, 2001 |
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1999
Scanning the available Dictyostelium discoideum proteome for O-linked GlcNAc glycosylation sites using neural networks
Gupta R, Jung E, Gooley AA, Williams KL, Brunak S, Hansen J
Glycobiology, 9, 1009-1022, 1999 |
PubMed
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O-GLYCBASE version 4.0: a revised database of O-glycosylated proteins
Gupta R, Birch H, Rapacki K, Brunak S, Hansen JE
Nucleic Acids Res., 27, 370-372, 1999 |
PubMed
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This file was last modified Friday 3rd of September 2010 09:03:29 GMT |
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