2017 (1) 2016 (1) 2013 (1) 2012 (2)


    MGmapper: Reference based mapping and taxonomy annotation of metagenomics sequence reads.
    Petersen TN, Lukjancenko O, Thomsen MCF, Maddalena Sperotto M, Lund O, Møller Aarestrup F, Sicheritz-Pontén T
    PLoS ONE, 2017


    A Bacterial Analysis Platform: An Integrated System for Analysing Bacterial Whole Genome Sequencing Data for Clinical Diagnostics and Surveillance
    Thomsen MCF, Ahrenfeldt J, Cisneros JLB, Jurtz V, Larsen MV, Hasman H, Aarestrup FM, Lund O
    PLoS ONE, 2016


    MHCcluster, a method for functional clustering of MHC molecules
    Thomsen MCF, Lundegaard C, Buus S, Lund O, Nielsen M
    Immunogenetics 65(9):655-65 doi:10.1007/s00251-013-0714-9, 2013
    Relevant URL


    snpTree-a web-server to identify and construct SNP trees from whole genome sequence data
    Leekitcharoenphon P, Kaas RS, Thomsen MCF, Friis C, Rasmussen S, Aarestrup FM
    BMC Genomics:S6 doi:10.1186/1471-2164-13-S7-S6, 2012
    Seq2Logo: a method for construction and visualization of amino acid binding motifs and sequence profiles including sequence weighting, pseudo counts and two-sided representation of amino acid enrichment and depletion
    Thomsen MCF, Nielsen M
    Oxford Journals, 2012
    Relevant URL

2017 (1) 2016 (1) 2013 (1) 2012 (2)