Full Project Catalog

Bachelor Projects

• 08/07-2009 - A Drug - Protein Interaction Network Related to Psychotic Diseases

• 01/07-2010 - Pan-genome Analysis of the Clostridia Family
• 18/12-2009 - Comparative Microbial Genomics for Staphylococcus Aureus
• 15/01-2009 - Comparison of Vibrio Genomes
• 01/09-2008 - Comparison of Pseudomonas Genomes

• 01/12-2011 - A novel method for construction and visualization of amino acid binding motifs and sequence profiles including sequence weighting, pseudo counts and two-sided representation of amino acid enrichment and depletion
• 30/06-2011 - Validation of predictors of discontinous B-cell epitopes using homology modelled 3-D protein structures
• 30/06-2011 - Prediction of the immunogenicity of therapeutic antibodies
• 15/06-2011 - Validtion of multi-layer multi-valued neural networks
• 10/12-2010 - Immunological pressure and molecular evolution of Influenza A virus
• 20/12-2009 - Molecular Evolution of Influenza A Virus
• 26/06-2009 - Selection and Validation of CTL Responding Peptides by Bioinformatics Methods
• 07/05-2009 - Structural Properties of MHC Class II Ligands
• 23/01-2009 - Molecular Evolution of Influenza A Virus
• 19/12-2008 - Implementation and validation of a stabilization matrix method for peptide:MHC binding predictions
• 30/06-2008 - Peptide binding based substitution matrices in epitope prediction

• 21/02-2012 - Expression of tumor associated antigens in a large paddle of tumor cell lines - A PCR based study
• 21/01-2012 - Will maternal overnutrition during gestation and weaning affect development of adipose inflammation in the offspring?
• 20/01-2012 - Quantification of C. trachomatis load by q-pcr and immunoflourescence staining ? is there a correlation
• 20/01-2012 - Functional examinations of MLH1, MSH2, and MSH6 mutations identified in Danish Hereditary Non-polyposis Colorectal Cancer patients
• 19/01-2012 - The impact of the mothers energy-intake during pregnancy on response to overnutrition in the offspring ? Effects on leptin and insulin
• 01/07-2011 - Development of a method for characterization and activation of human invariant NKT cells
• 31/01-2011 - Identification of DC phenotype induced by Salmonella
• 31/01-2011 - Deregulated immune responses in atopic dermatitis
• 22/01-2011 - Mouse model of endometriosis
• 21/01-2011 - Effects of maternal gestational-overnutrition on regulation of lipid-metabolism in the offspring
• 20/08-2010 - Tumor Suppressive Factors and Modulation of Dendritic Cells in Melanoma Cancer
• 31/05-2010 - Expression of Markers for M1 and M2-type Macrophages in Adipose Tissue from Obese Mice ? The Impact of Phytanic Acid
• 26/02-2010 - Development and Validation of a Tracer for PET-based Non-invasive uPAR Characterization in Tumors
• 04/06-2009 - Immune Regulation in Human Dendritic Cells by Fungal b-Glucans
• 28/02-2009 - Developmental Programming of Hepatic Lipid Deposition
• 16/05-2008 - Immune response regulation by specific nutrients
• 25/02-2008 - Engelsk titel* Effects of the dietary fatty acid intake on PPAR-? activity in the liver
• 31/01-2008 - Foetal programming; Effects on pancreatic lipid deposition
• 29/06-2007 - Immuno modulating effects of fibres from barley and oat
• 22/06-2007 - The impact of obesity on the activity of serine-palmitoyl-CoA transferase in mouse heart.
• 22/06-2007 - The impact of obesity on sphingolipids in the circulation

• 08/07-2009 - A Drug - Protein Interaction Network Related to Psychotic Diseases
• 30/06-2008 - Expression Evidence for Loss of Function Mutations in Key Cancer Genes of Diffuse Large B-Cell Lymphoma (DLBL) Patients

• 20/12-2011 - Evolution of new genes in malaria and related parasites
• 17/06-2011 - Analysis of variable gene families in the genome of the malaria parasite
• 10/12-2010 - Immunological pressure and molecular evolution of Influenza A virus
• 30/09-2010 - Evolution and Dynamics of the Major Vault Protein
• 01/07-2010 - Detection of Natural Selection in the Malaria Parasite Plasmodium Falciparum Using Model-based Methods
• 07/05-2010 - Intron Evolution
• 20/12-2009 - Molecular Evolution of Influenza A Virus
• 18/12-2009 - Intron Evolution
• 23/01-2009 - Molecular Evolution of Influenza A Virus

• 27/06-2011 - MicroRNA regulation of gene expression in lymphomas
• 01/09-2010 - BSc Thesis & iGEM Competition
• 15/06-2010 - Modeling the Regulation of Metabolism: Challenges and Perspectives
• 30/06-2008 - Expression Evidence for Loss of Function Mutations in Key Cancer Genes of Diffuse Large B-Cell Lymphoma (DLBL) Patients

Master Projects

• 28/02-2012 - QSAR and docking studies on selective PPAR? ligand analogues
• 28/02-2012 - A human diet interactome network of protein complexes implicated in genetic disorders
• 28/02-2012 - Carbohydrate active enzymes: looking for new sources and novel functionalities
• 15/09-2011 - Deciphering the clinical effect of drugs via metagenome and metabolome analyses
• 10/06-2011 - Novel Apiaceae cytochromes P450 of the CYP71AJ subfamily: Combining functional yeast expression and in silico homology modeling in elucidating substrate specificity
• 30/01-2011 - Computatioinal Design at Small Molecules for Targeting Human Infectious Desease
• 30/08-2010 - In Silico Exploration of the Chemical Space of Natural Compounds from Ayurveda Traditional Medicine
• 12/06-2009 - Analysis of the Pharmacological Space Based on PubChem Bioassay Data
• 02/01-2009 - Global Analyses of the Chemical Space of Ligands Binding to PPARs and Other Nuclear Receptors
• 05/10-2007 - Development of a Chemoinformatics database and tool for the Prediction of Compounds that could act as Leads in the Drug Development Pipeline

• 24/10-2011 - Comparison of probiotic bacterial core genes in Human Microbiome Samples
• 20/08-2011 - Sequence-based Classification of Prokaryotes
• 06/12-2010 - Predicting the Function of Bacterial Proteins
• 22/11-2010 - Biofilm formation of Achromobacter xylosoxidans - an emerging CCFpathogen
• 01/10-2010 - Biofilm Formation of Achromobacter Xylosoxidans - an Emerging Cystic Fibrosis Pathogen
• 30/09-2010 - Bioinformatic analysis of Mycobacterium avium subsp. paratuberculosis Ejlskov 2007
• 09/08-2010 - Design of an Enterobacteriaceae Pangenome Microarray Chip
• 02/07-2010 - Anti-biofilm Compounds from Plants
• 14/12-2009 - Using Bioinformatics Tools to Study Mycobacterium Avium Subsp. Paratuberculosis Ejlskov 2007
• 15/08-2009 - Immunological Analysis of Mycobacterium Avium Subsp. Paratuberculosis Ejlskov 2007
• 02/08-2009 - Comparative Genome Analysis of Mycobacterium Avium Subsp. Paratuberculosis Ejlskov 2007
• 01/09-2008 - Genome Annotation of Pseudomonas aeruginosa Clinical Isolates
• 05/09-2007 - Bacteroides Comparative Genomics
• 12/06-2006 - Prediction of Gene Regulation in Streptomyces coelicolor
• 15/12-2005 - Microarray design and expression profiling for Campylobacter jejuni
• 02/09-2005 - Prediction of rRNA operon transcription units in bacterial genomes

• 01/02-2012 - Protein complexes affected by differential expression and copy number variations in CLL patient subsets
• 14/10-2011 - Integrative data analysis of chronic lymphocytic leukemia patient subsets
• 22/08-2011 - Improved protein homology modelling using structure specific gap penalties and multiple templates
• 20/11-2009 - Neural Network Based Computational Prediction of MicroRNA Targets
• 03/03-2009 - Structure-guided Prediction of MHC-II Ligand Binding
• 06/08-2007 - Prediction of local structure elements using artificial neural networks

• 31/05-2012 - Analysis of overlap between pathogenic and human peptides in MHC binding and presentation
• 07/11-2011 - Peptide overlap between humans and human pathogens
• 19/09-2011 - Identification of position specific receptor-ligant interactions by use of artificial neural network decomposition. An investigation of interactions in the MHC:peptide system
• 22/08-2011 - Improved protein homology modelling using structure specific gap penalties and multiple templates
• 15/04-2011 - Evaluation of HIV-1 CCR5/CXCR4 Tropism in Danish HIV Infected Patients
• 31/03-2011 - Analysis of B-cell epitopes based on structural analysis of 3D antigen-antibody interactions
• 25/03-2011 - Define Optimal Conditions for Assaying of Low-affinity TCR-MHC Interactions Using MHC Multimers
• 15/03-2011 - Analysis of Individual and Mixtures of Antibodies
• 14/02-2011 - In Silico Immunogenicity Evaluation and Commercialisation of a Protein Drug
• 30/06-2010 - In Silico Prediction of T Cell Receptor Specificity
• 01/03-2010 - Analysis of Malaria Proteins
• 31/07-2009 - Swine SLA Clustering Using Sequence and Specificity Similariity
• 30/06-2009 - In Silico Prediction of Bacterial Pathogenicity
• 03/03-2009 - Structure-guided Prediction of MHC-II Ligand Binding
• 20/08-2007 - Computational Mapping of Antibody Binding Sites in HIV
• 06/08-2007 - Prediction of local structure elements using artificial neural networks
• 06/07-2007 - Feature based discrimination of antigenes in Malaria
• 31/07-2006 - Implementation and Evaluation of Protein Potentials: Applications to Immunological Problems
• 28/07-2006 - Epitope prediction in arenaviruses
• 01/04-2005 - Development of diagnostic assays for detection of retinal diseases

• 01/10-2012 - The degradation fragments of Tau protein as biomarkers of Alzheimer?s Disease
• 01/11-2011 - HIV tropisms and deregulated response patterns in dendritic cells
• 18/04-2011 - Secreted MTB Virulence Proteins as Vaccine Antigens and Identification of Possible Host Cell Targets
• 14/03-2011 - Bacteria-induced modulation of lung epithelium expression patterns and crosstalk with local immune cells
• 14/03-2011 - Comparison of the reactivity of airway-associated bacteria in relation to lung inflammation
• 13/03-2011 - Dendritic Cell Responses to Commensal Bacteria of the Lungs
• 14/01-2011 - Characterisation of Binding Capacity of Plasmodium Falciparum Infected Erythrocytes during Flow
• 27/11-2010 - Anaysis of difffentially expressed surface proteins in Th1 Th2 and Th17 promoting Dendritic cells
• 10/11-2010 - Fetal and post-natal programming of lipid accumulation in skeletal muscles in sheep
• 05/11-2010 - Salmonella Infection, Diverse Gut Invasion Mechanisms and Distinct Local and Systemic Immune Cell Kinetics
• 20/09-2010 - Tumor Suppressive Factors and Modulation of Dendritic Cells in Relation to Cancer Progression
• 19/03-2010 - The Significance of NOD2 Mutations for Adhesion Ability of Invasive E. Coli Bacteria to Gut Epithelium from Crohn?s Disease Patients
• 12/03-2010 - Endocytosis of Bacteria and Nanoparticles in Antigen Presenting Cells: Impact of Toll like Receptors
• 26/02-2010 - Influence of Specific Nutrients on Inferon Gamma Production of NK Cells
• 26/02-2010 - Docosapentaenoic Acid (22:5n-3) Induces the Expression of Fat Oxidation Genes in a PPAR-? Dependent or Independent Mechanism?
• 31/07-2009 - Effects of High-fat Intake during Pregnancy on Hepatic Fat-accumulation and Hepatic Expression of Genes Related to Fat Metabolism in Rat Pups
• 26/06-2009 - Gut-invasion Mechanisms Exploited by Salmonella
• 01/01-2009 - Immunomodulating proporties of selected human faecal bacterial isolates
• 31/12-2008 - Dietary influence on immune maturation studied in newborn mice
• 01/11-2008 - Anti-tumor activity of protein kinase inhibitor
• 15/10-2008 - Validation of putative pharmacologically relevant target genes for the treatment of obesity and type II diabetes
• 01/03-2008 - Significance of membrane fatty acid composition in Streptococcus thermophilus
• 24/09-2007 - Maturation of the neonatal immune system: effect of maternal dietary fatty acid composition
• 01/08-2007 - Significance of membrane fatty acid composition in Streptococcus thermophilus
• 30/06-2007 - Immune modulation properties of dietary fibres
• 31/05-2007 - The impact of dietary fat intake and obesity on sphingolipid metabolism in mice and man
• 31/01-2007 - The influence of n-3 fatty acids on monocytic plasma membrane function
• 30/06-2005 - The role of phospholipase A2 in endothelial cell migration

• 30/06-2011 - The Genetic Basis for Comorbidity
• 01/02-2011 - An Integrated Computational Platform for Vaccine Target Discovery in Flavivirus spp.
• 12/06-2009 - Analysis of the Pharmacological Space Based on PubChem Bioassay Data
• 10/03-2008 - Tools to study transcriptional regulation of the cell-cycle
• 05/10-2007 - Development of a Chemoinformatics database and tool for the Prediction of Compounds that could act as Leads in the Drug Development Pipeline
• 01/07-2007 - Degradome project: A Bioinformatics approach to intracellular protein degradation
• 22/07-2005 - Toxicity classification from NMR metabonomic data using artificial neural networks
• 15/07-2005 - Scoring functions for protein-protein docking
• 04/07-2005 - Prediction of spliceosomal introns in humane pre-mRNA
• 01/04-2005 - Development of diagnostic assays for detection of retinal diseases

• 20/06-2012 - A novel method of improving protein stability and serum half-life using protein design
• 01/11-2011 - HIV tropisms and deregulated response patterns in dendritic cells
• 10/06-2011 - Novel Apiaceae cytochromes P450 of the CYP71AJ subfamily: Combining functional yeast expression and in silico homology modeling in elucidating substrate specificity
• 01/03-2011 - Molecular Genetic Basis of Type 2 Diabetes Mellitus, Metabolic Syndrome and Related Phenotypes
• 02/01-2009 - Global Analyses of the Chemical Space of Ligands Binding to PPARs and Other Nuclear Receptors
• 14/12-2007 - The role of suPAR in inflammation, an active participant or passive bystander?
• 28/08-2006 - Optimizing RNA structure prediction by combination of multiple sequence analyses
• 03/10-2005 - Analysis of the evolution of stop codons in pro-viral HIV DNA sequence

• 24/10-2011 - Comparison of probiotic bacterial core genes in Human Microbiome Samples
• 31/07-2010 - Neural Network Based Computational Prediction of Chitinases in Microbial Communities
• 20/11-2009 - Population Differentiation of SNP Affecting Post-translational Modification Sites in Disease-associated Proteins

• 01/10-2012 - Measuring and modeling the dynamics of protein translation in the yeast stress response
• 23/05-2011 - Designing expression level: Optimization and combination of central dogma predictive models
• 27/11-2010 - Anaysis of difffentially expressed surface proteins in Th1 Th2 and Th17 promoting Dendritic cells
• 27/09-2010 - Physiology of Protein Kinases and Phosphatases Mutants in the DNA Damage Response
• 30/07-2010 - Adaptive Stress Response to Oxidative Stress
• 03/05-2010 - Metabolic Modeling and Engineering of Escherichia coli for Glycerol Bioconversion
• 31/05-2009 - Assessing the Functional Role of Protein Kinases and Phosphatases in the DNA Damage Response in Yeast
• 10/03-2008 - Tools to study transcriptional regulation of the cell-cycle
• 01/02-2008 - Investigation of genetic interactions in DNA mismatch repair pathways

• 29/08-2011 - OCELOT: A novel on-line cancer analysis tool to collect, integrate and analyse gene expression and clinical data

Special Courses

• 20/06-2005 - Eksperimental course on Microbial gene expression

• 31/01-2012 - Chemoinformatics in drug discovery
• 30/09-2011 - Analysis of small molecule agents in protein structures
• 26/08-2011 - Application of chemoinformatics tools in nutrigenomics studies
• 03/06-2011 - Clustering of central nervous system diseases based on their metabolic fingerprint
• 31/05-2011 - Mapping of metabolites on the bacterial space
• 31/08-2010 - Gene expression data mining of drugs using cMAP
• 17/05-2010 - Recent Approaches for the Identification of Novel "Druggable" Targets

• 30/03-2012 - Identification of genetic markers relevant to bacterial optimum temperature
• 01/02-2012 - SCCmec conservation in S.aureus genomes
• 01/02-2011 - Veillonella - in the middle between Gram Positives and Gram Negatives
• 30/01-2011 - Comparative Genomics of Asthma Related Pathogens and other Airway Bacteria
• 15/01-2011 - Comparison of Genome Sequence-Based Classification Methods for Bacteria
• 20/12-2010 - The Scientific Communication of Comparative Genomics
• 01/12-2010 - Annotation of the Achromobacter Xylosoxidans NH-44784-1996 Genome
• 09/08-2010 - Defining the Pseuolomonas genus: Where do we draw the line?
• 01/07-2010 - Pan-genomics of Staphylococcus Aureus
• 23/06-2010 - Pan-genomics of Salmonella
• 11/05-2010 - Scientific Programming Using Python
• 11/05-2010 - Vibrio Pan-Genomics
• 15/03-2010 - Analysis of the SCCmec Cassette and the Flanking Regions in Staphylococcus Aureus
• 29/01-2010 - Pathogenicity Islands of Staphylococcus Aureus
• 01/10-2009 - Genometyping of Clostridial Species
• 26/06-2009 - Tools for Comparative Microbial Genomics
• 08/05-2009 - Vibrio Genomics
• 02/02-2009 - Annotation of a New Vibrio Anguillarum Genome Sequence

• 08/12-2011 - Prediction of protein stability by use of artificial neural networks
• 01/03-2011 - A Systems View on Chronic Lymphocytic Leukemia

• 01/02-2012 - HLA allele specific dominant effects determined using verified HIV CTL epitopes
• 15/12-2011 - Evaluation of CTL Epitope predtions at Peptide Length Larger than 10 Amino Acid Residues
• 02/12-2011 - Analysis of FACS data using probability binning
• 01/11-2011 - Python programming in Bioinformatics
• 25/08-2011 - Improvement of predictions of MHC-I-peptide binding affinities using combined data from 9, 10 and 11 mer peptides
• 24/08-2011 - Effect of primary sequence on the expression of antibodies
• 01/07-2011 - Analysis of FACS data using R
• 11/02-2011 - HLA allele specific dominanse of verified HIV CTL epitopes
• 01/02-2011 - Improved Protein Homology Modeling Using Structure Specific Gap Penalties
• 31/01-2011 - A method for identification of receptor-ligand interactions by artificial neural network decomposition. Applied to the peptide:MHC system
• 28/01-2011 - Improvement of predictions of MHC-peptide binding affinities using initial classification predictions
• 21/01-2011 - Influence of the Cellular Immune Response on Specific Resistance Mutations in HIV
• 21/01-2011 - Introduction to programming in Python
• 21/01-2011 - Preparation of a scientific manuscript regarding own research and submission to an international peer reviewed journal
• 20/01-2011 - Python programming of tool for analysis of protein structures in relation to improvement of B-cell epitope predictions
• 31/12-2010 - Evaluation of MHC-peptide Binding Predictors at Peptide Length Larger than 11 Amino Acid Residues
• 14/12-2010 - Sequence Analysis in t-cell Epitopes and Antigens
• 03/12-2010 - Improvement of MHC-peptide Binding Affinity Predictions Using Neural Networks Trained on Classification Data
• 24/09-2010 - Competitive Influences of Anti-CD8 Antibodies on MHC Dextramer Binding to Antigen-specific T-cells
• 01/07-2010 - A Bioinformatic Approach to Predict Immunogenecity in Therapeutic Proteins
• 25/06-2010 - Improvement of MHC:Peptide Binding Prediction by Use of Classification Networks
• 20/06-2010 - Identification of MHC Class I Ligands Using MHC Binding and Stability Predictions
• 18/06-2010 - Effects of Antibody Mixtures
• 15/05-2010 - Structural Properties of MHC Class II Ligands, Implications for Predictions of MHC Class II Epitopes
• 04/01-2010 - Genotyping and Determination of Genotypic Resistance of HBV
• 07/12-2009 - Immunological Applications of Contact Potentials

• 06/01-2012 - Cord blood immune phenotypes in relation to maternal atopic status
• 05/01-2012 - Characterization of immune cells in 18-months-old children with focus on deregulation in atopic diseases
• 31/12-2011 - Gut epithelial adhesion and invasion abilities of Salmonella spp during growth on different carbohydrate/prebiotic sources
• 22/12-2011 - The role of IL-1b in adipocyte regulation
• 31/08-2011 - Does the maternal energy-intake affect the expression of genes related to thermogenesis in brown adipose tissue in the newborn offspring?
• 29/08-2011 - Bioactive Components and Nutrigenomics
• 08/07-2011 - Cytokine Response Profiles and Activation Dynamics of Neonatal T cell Subsets
• 08/07-2011 - Identification of leukocyte subsets in flow cytometry by use of unsupervised learning methods.
• 27/06-2011 - HIV vaccine strategies: the impact of viral structure for immune evasion mechanisms and vaccine potency
• 01/06-2011 - Interactions between phenolic compounds in food and drugs affecting the prostaglandin pathway
• 09/05-2011 - Interaction between leptin and the T-cell phenotype in adipose inflammation
• 30/01-2011 - Comparative Genomics of Asthma Related Pathogens and other Airway Bacteria
• 21/01-2011 - Different factors affecting the development of obesity-induced sub-clinical inflammation and metabolic syndrome
• 20/12-2010 - Lifestyle Diseases and Functional Food
• 20/08-2010 - Composition and comparison of the human gut and respiratory microbiota
• 16/08-2010 - Immune Responses of the Lung
• 02/07-2010 - Salmonella typhimurium infection - Microbiology, immunology and biochemical methods
• 25/06-2010 - Effects of pytanic acid on markers of metabolic function in obese mice
• 25/06-2010 - Bacterial Colonisation of the Human Respiratory Tract
• 01/06-2010 - Health benefits of moderate alcohol consumption
• 01/06-2010 - Health Benefits of Moderate Alcohol Consumption
• 30/05-2010 - Implementing an Assay of Fatty Acid Oxidation in Hepatocytes
• 11/05-2010 - Inflammation in Adipose Tissue ? Background, Development and Importance for Lifestyle-related Diseases
• 15/04-2010 - Health-promoting bioactive diet and development of laboratory exercises
• 12/03-2010 - Replacement project for 27732 Human Nutrition
• 29/01-2010 - The importance of Dietary-fat Composition during Establishment of the Gut Microbiota on Short-chain Fatty Acid Concentration in Colon Content of Mice
• 29/01-2010 - Investigation of Breast Cancer Tumors: Microenvironment, Properties and Involvement of Different Factors
• 04/12-2009 - Modulation of the Response to Fibrates through Upregulation of the PPAR-alpha Gene
• 26/06-2009 - Inhibition of Carbohydrate-binding Receptors on Dendritic Cells
• 26/06-2009 - The Genetic of Liver-fat Accumulation
• 15/05-2009 - Uptake of Proteins and Nanoparticles by Antigen Presenting Cells
• 31/01-2009 - Absorption and Immunomodulating Effects of Dietary Fibres
• 23/01-2009 - Carbohydrate-mediated Regulation of Invasive Bacteria in Crohns Disease

• 01/02-2012 - Advanced Immunoinformatics
• 01/07-2011 - Textmining of clinical data (27009 Fagprojekt)
• 01/06-2011 - Interactions between phenolic compounds in food and drugs affecting the prostaglandin pathway
• 31/05-2011 - Mapping of metabolites on the bacterial space
• 25/06-2010 - A Gene Expression Analysis of Chronic Lymphocytic Leukemia
• 01/05-2010 - Advanced Immunoinformatics

• 30/03-2012 - Identification of genetic markers relevant to bacterial optimum temperature
• 15/02-2012 - Investigation into the effects of immunization with subdominant cytotoxic T-lymphocyte epitopes on the HIV-1 genome of treatment-naive chronic patients
• 01/11-2011 - Python programming in Bioinformatics
• 15/10-2011 - Project management in practice: Development of a virtual bio-laboratory
• 24/08-2011 - Effect of primary sequence on the expression of antibodies
• 01/07-2011 - Novel docking protocol to analyze ligand binding poses in comparative 7TM models using mutational data
• 23/05-2011 - Bayesian modeling of intron number distributions
• 19/02-2011 - Kinetic and Computational Studies of De Novo Designed Kemp Elimination Enzymes
• 28/01-2011 - Intensive Perl
• 14/01-2011 - Homology Modeling and Docking Studies of G protein-coupled receptor 119
• 03/12-2010 - Improvement of MHC-peptide Binding Affinity Predictions Using Neural Networks Trained on Classification Data
• 29/01-2010 - Next Generation Sequencing of Pestivirus Genomes
• 21/09-2009 - The Evolution of Introns - a Literature Review
• 26/06-2009 - Dataset Construction and Python Programming for Phylogenetic Analysis

• 01/07-2011 - Metagenomics and transcriptomics analysis of the human gut microbiome in context of Inflammatory Bowel Disease
• 04/01-2010 - Metagenomics of Cold-adapted Enzymes

• 29/11-2011 - DNA Microarray Analysis
• 02/10-2011 - International Genetic Engineering Competition (iGEM)
• 20/08-2011 - Introduction to Systems Biology
• 15/06-2011 - Copper response mechanisms in Yeast
• 15/04-2011 - Introduction to Systems Biology
• 03/12-2010 - Efficient software design for biological sequence analysis using C++
• 01/11-2010 - iGEM Project
• 30/05-2010 - Microarray and HPLC Analysis of the S. Pombe Oxidative Stress Response
• 17/05-2010 - Interactive Visualization of Time-series Data
• 17/05-2010 - Programming for the Ambitious Biologist
• 02/04-2010 - High throughput data analysis in R
• 30/06-2009 - Assessment of Suitability of Different Programming Languages for an Introductory Bioinformatics Course

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