[login]

Selection summary: 5 segments, 4 strains, 3 species, 2 genera

Available tables

Row Reference Organism Click to show species Sub-strain Taxgroup Segment Click to show segment Size(bp) %AT %Global Direct repeats %Global Inverted repeats %Local Direct repeats %Local Inverted repeats %Local Mirror repeats %Local Everted repeats %SR       1 Unpublished Deinococcus geothermalis Strain: DSM11300 DSM11300 BDDD Deinococcus-Thermus Deinococci NCBI: Tax 319795 Main cir 2,467,205 bp 33.4% 1.80% 1.70% 8.90% 5.10% 5.70% 4.70% 0.80% 2 Unpublished [NCBI Entrez] Thermus thermophilus Strain: HB8 BDDT Deinococcus-Thermus Deinococci NCBI: Tax 300852 Main cir 1,849,742 bp 30.5% 1.50% 1.70% 20.70% 12.80% 12.60% 11.80% 1.60% 3 Science. 1999 Nov 19,  286(5444):1571-7 1999 Nov 19 [Abstract] | [PubMed] | [NCBI Entrez] Deinococcus radiodurans Strain: R1 BDDD Deinococcus-Thermus Deinococci NCBI: Tax 243230 Chr 2 cir 412,348 bp 33.3% 1.20% 0.30% 11.00% 5.80% 6.50% 6.00% 0.80% Science. 1999 Nov 19,  286(5444):1571-7 1999 Nov 19 [Abstract] | [PubMed] | [NCBI Entrez] BDDD Deinococcus-Thermus Deinococci NCBI: Tax 243230 Chr 1 cir 2,648,638 bp 33.0% 3.20% 3.20% 11.90% 6.00% 7.10% 5.70% 0.80% 4 Nat Biotechnol. 2004 May,  22(5):547-53. Epub 2004 Apr 4 2004 May [Abstract] | [PubMed] | [NCBI Entrez] Thermus thermophilus Strain: HB27 BDDT Deinococcus-Thermus Deinococci NCBI: Tax 262724 Main cir 1,894,877 bp 30.6% 1.70% 1.60% 20.50% 12.80% 12.50% 11.70% 1.70%

REFERENCES

• Jensen LJ, Friis C, Ussery DW (1999). Three views of microbial genomes Res Microbiol 150:773-777 PDF | Pubmed
• Peter F. Hallin and David Ussery (2004). CBS Genome Atlas Database: A dynamic storage for bioinformatic results and sequence data Bioinformatics 20:3682-3686 PDF | Pubmed

CORRESPONDENCE: