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Selection summary: 17 segments, 17 strains, 10 species, 7 genera

Available tables

Row Organism Click to show species Sub-strain Taxgroup Segment Click to show segment %AT Size(bp) Contigs Periodicity Reference           1 Anabaena nostoc Strain: PCC7120 BCyano NN Cyanobacteria Nostocales NCBI: Tax 103690 Main cir 58.7% 6,413,771 bp 1 Show DNA Res. 2001 Oct 31;8(5):205-13,  8(5):205-13; 227-53 2001 Oct 31 [Abstract] | [PubMed] | [NCBI Entrez] 2 Anabaena variabilis Strain: ATCC29413 BCyano NN Cyanobacteria Nostocales NCBI: Tax 240292 Main cir 58.6% 6,365,727 bp 1 Show Unpublished [NCBI Entrez] 3 Cyanobacteria bacterium Strain: YellowstoneA BCyano CS Cyanobacteria Chroococcales NCBI: Tax 321327 Main cir 39.8% 2,932,766 bp 1 Show Appl Environ Microbiol. 2006 Jan,  72(1):544-50 2006 Jan [Abstract] | [PubMed] 4 Cyanobacteria bacterium Strain: YellowstoneB BCyano CS Cyanobacteria Chroococcales NCBI: Tax 321332 Main cir 41.6% 3,046,682 bp 1 Show Appl Environ Microbiol. 2006 Jan,  72(1):544-50 2006 Jan [Abstract] | [PubMed] 5 Gloeobacter violaceus Strain: PCC7421 BCyano GG Cyanobacteria Gloeobacteria NCBI: Tax 251221 Main cir 38.0% 4,659,019 bp 1 Show DNA Res. 2003 Aug 31,  10(4):137-45 2003 Aug 31 [Abstract] | [PubMed] | [NCBI Entrez] 6 Prochlorococcus marinus Strain: MED4 BCyano PP Cyanobacteria Prochlorales NCBI: Tax 59919 Main cir 69.2% 1,657,990 bp 1 11.1 Nature. 2003 Aug 28,  424(6952):1042-7. Epub 2003 Aug 13 2003 Aug 28 [Abstract] | [PubMed] | [NCBI Entrez] 7 Prochlorococcus marinus Strain: MIT9312 BCyano PP Cyanobacteria Prochlorales NCBI: Tax 74546 Main cir 68.8% 1,709,204 bp 1 Show Unpublished [NCBI Entrez] 8 Prochlorococcus marinus Strain: MIT9313 BCyano PP Cyanobacteria Prochlorales NCBI: Tax 74547 Main cir 49.3% 2,410,873 bp 1 Show Nature. 2003 Aug 28,  424(6952):1042-7. Epub 2003 Aug 13 2003 Aug 28 [Abstract] | [PubMed] | [NCBI Entrez] 9 Prochlorococcus marinus Strain: NATL2A BCyano PP Cyanobacteria Prochlorales NCBI: Tax 59920 Main cir 64.9% 1,842,899 bp 1 Show Unpublished [NCBI Entrez] 10 Prochlorococcus marinus Strain: SS120 BCyano PP Cyanobacteria Prochlorales NCBI: Tax 167539 Main cir 63.6% 1,751,080 bp 1 Show Proc Natl Acad Sci U S A. 2003 Aug 19,  100(17):10020-5. Epub 2003 Aug 13 2003 Aug 19 [Abstract] | [PubMed] | [NCBI Entrez] 11 Synechococcus elongatus Strain: PCC6301 BCyano CS Cyanobacteria Chroococcales NCBI: Tax 269084 Main cir 44.5% 2,696,255 bp 1 Show Unpublished [NCBI Entrez] 12 Synechococcus elongatus Strain: PCC7942 BCyano CS Cyanobacteria Chroococcales NCBI: Tax 1140 Main cir 44.5% 2,695,903 bp 1 Show Unpublished [NCBI Entrez] 13 Synechococcus sp Strain: WH8102 BCyano CS Cyanobacteria Chroococcales NCBI: Tax 84588 Main cir 40.6% 2,434,428 bp 1 11.2 Nature. 2003 Aug 28,  424(6952):1037-42. Epub 2003 Aug 13 2003 Aug 28 [Abstract] | [PubMed] | [NCBI Entrez] 14 Synechococcus species Strain: CC9605 BCyano CS Cyanobacteria Chroococcales NCBI: Tax 110662 Main cir 40.8% 2,510,659 bp 1 Show Unpublished [NCBI Entrez] 15 Synechococcus species Strain: CC9902 BCyano CS Cyanobacteria Chroococcales NCBI: Tax 316279 Main cir 45.8% 2,234,828 bp 1 Show Unpublished [NCBI Entrez] 16 Synechocystis species Strain: PCC6803 BCyano CS Cyanobacteria Chroococcales NCBI: Tax 1148 Main cir 52.3% 3,573,470 bp 1 Show DNA Res. 1995 Aug 31,  2(4):153-66, 191-8 1995 Aug 31 [Abstract] | [PubMed] | [NCBI Entrez] 17 Thermosynechococcus elongatus Strain: BP1 BCyano CT Cyanobacteria Chroococcales NCBI: Tax 197221 Main cir 46.1% 2,593,857 bp 1 11.0 Unpublished [NCBI Entrez]

REFERENCES

• Peder Worning, Lars Juhl Jensen, Karen E. Nelson, Søren Brunak, and David W. Ussery (2000). Structural analysis of DNA sequence: Evidence for lateral gene transfer in Thermotoga maritima Nucleic Acids Research 28:706-709 PDF | Pubmed
• Peter F. Hallin and David Ussery (2004). CBS Genome Atlas Database: A dynamic storage for bioinformatic results and sequence data Bioinformatics 20:3682-3686 PDF | Pubmed

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