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Selection summary: 17 segments, 17 strains, 10 species, 7 genera  Close the kingdom view of Bacteria and return to index
Available tables

Two-Component Systems Predictions by profile HMM

Genome Atlas Database - BACTERIA

Acidobacteria Actinobacteria Aquificae
Bacteroidetes/Chlorobi Chlamydiae/Verrucomicrobia Chloroflexi
Cyanobacteria Deinococcus-Thermus Firmicutes
Fusobacteria Planctomycetes Proteobacteria
Spirochaetes Thermotogae unclassified
Search:

RowOrganism
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Sub-strain
Segment
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Size(bp)
HisKA Proteins
RRreciever Proteins
Reference

     
1Anabaena nostoc
Strain: PCC7120
Main
cir
6,413,771 bp97 predicted122 predictedDNA Res. 2001 Oct 31;8(5):205-138(5):205-13; 227-53
2001 Oct 31
[Abstract] | [PubMed] | [NCBI Entrez]
2Anabaena variabilis
Strain: ATCC29413
Main
cir
6,365,727 bp96 predicted118 predictedUnpublished

[NCBI Entrez]
3Cyanobacteria bacterium
Strain: YellowstoneA
Main
cir
2,932,766 bp19 predicted32 predictedAppl Environ Microbiol. 2006 Jan72(1):544-50
2006 Jan
[Abstract] | [PubMed]
4Cyanobacteria bacterium
Strain: YellowstoneB
Main
cir
3,046,682 bp21 predicted33 predictedAppl Environ Microbiol. 2006 Jan72(1):544-50
2006 Jan
[Abstract] | [PubMed]
5Gloeobacter violaceus
Strain: PCC7421
Main
cir
4,659,019 bp40 predicted47 predictedDNA Res. 2003 Aug 3110(4):137-45
2003 Aug 31
[Abstract] | [PubMed] | [NCBI Entrez]
6Prochlorococcus marinus
Strain: MED4
Main
cir
1,657,990 bp3 predicted6 predictedNature. 2003 Aug 28424(6952):1042-7. Epub 2003 Aug 13
2003 Aug 28
[Abstract] | [PubMed] | [NCBI Entrez]
7Prochlorococcus marinus
Strain: MIT9312
Main
cir
1,709,204 bp3 predicted6 predictedUnpublished

[NCBI Entrez]
8Prochlorococcus marinus
Strain: MIT9313
Main
cir
2,410,873 bp3 predicted9 predictedNature. 2003 Aug 28424(6952):1042-7. Epub 2003 Aug 13
2003 Aug 28
[Abstract] | [PubMed] | [NCBI Entrez]
9Prochlorococcus marinus
Strain: NATL2A
Main
cir
1,842,899 bp3 predicted6 predictedUnpublished

[NCBI Entrez]
10Prochlorococcus marinus
Strain: SS120
Main
cir
1,751,080 bp3 predicted5 predictedProc Natl Acad Sci U S A. 2003 Aug 19100(17):10020-5. Epub 2003 Aug 13
2003 Aug 19
[Abstract] | [PubMed] | [NCBI Entrez]
11Synechococcus elongatus
Strain: PCC6301
Main
cir
2,696,255 bp13 predicted22 predictedUnpublished

[NCBI Entrez]
12Synechococcus elongatus
Strain: PCC7942
Main
cir
2,695,903 bp13 predicted22 predictedUnpublished

[NCBI Entrez]
13Synechococcus sp
Strain: WH8102
Main
cir
2,434,428 bp4 predicted8 predictedNature. 2003 Aug 28424(6952):1037-42. Epub 2003 Aug 13
2003 Aug 28
[Abstract] | [PubMed] | [NCBI Entrez]
14Synechococcus species
Strain: CC9605
Main
cir
2,510,659 bp4 predicted8 predictedUnpublished

[NCBI Entrez]
15Synechococcus species
Strain: CC9902
Main
cir
2,234,828 bp4 predicted7 predictedUnpublished

[NCBI Entrez]
16Synechocystis species
Strain: PCC6803
Main
cir
3,573,470 bp40 predicted51 predictedDNA Res. 1995 Aug 312(4):153-66, 191-8
1995 Aug 31
[Abstract] | [PubMed] | [NCBI Entrez]
17Thermosynechococcus elongatus
Strain: BP1
Main
cir
2,593,857 bp14 predicted28 predictedUnpublished

[NCBI Entrez]



CORRESPONDENCE:

Scientific questions: David W. Ussery       Peter Fischer Hallin