Events News Research CBS CBS Publications Bioinformatics
Staff Contact About Internal CBS CBS Other


[login]

Selection summary: 8 segments, 6 strains, 5 species, 3 genera  Close the kingdom view of Bacteria and return to index
Available tables

AT content

Genome Atlas Database - BACTERIA

Acidobacteria Actinobacteria Aquificae
Bacteroidetes/Chlorobi Chlamydiae/Verrucomicrobia Chloroflexi
Cyanobacteria Deinococcus-Thermus Firmicutes
Fusobacteria Planctomycetes Proteobacteria
Spirochaetes Thermotogae unclassified
Search:

Row
Taxgroup
Organism
Click to show species
Sub-strain
Segment
Click to show segment
Size(bp)
%AT
AT skeworigin AT content (Relative to AVG)Terminus AT content (Relative to AVG)Reference

       
1BSpiro SS
Spirochaetes
Spirochaetes
NCBI: Tax 224326
Borrelia burgdorferi
Strain: B31
Main
lin
910,724 bp71.4%N/AN/AN/ANature. 1997 Dec 11390(6660):580-6
1997 Dec 11
[Abstract] | [PubMed] | [NCBI Entrez]
2BSpiro SS
Spirochaetes
Spirochaetes
NCBI: Tax 290434
Borrelia garinii
Strain: PBi
Main
lin
904,246 bp71.7%N/AN/AN/ANucleic Acids Res. 2004 Nov 1632(20):6038-46. Print 2004
2004 Nov 16
[Abstract] | [PubMed] | [NCBI Entrez]
3BSpiro SL
Spirochaetes
Spirochaetes
NCBI: Tax 189518
Leptospira interrogans
Strain: 56601
Chr 1
cir
4,332,241 bp65.0%‑1.58%N/AN/ANature. 2003 Apr 24422(6934):888-93
2003 Apr 24
[Abstract] | [PubMed] | [NCBI Entrez]
BSpiro SL
Spirochaetes
Spirochaetes
NCBI: Tax 189518
Chr 2
cir
358,943 bp64.9%‑1.97%N/AN/ANature. 2003 Apr 24422(6934):888-93
2003 Apr 24
[Abstract] | [PubMed] | [NCBI Entrez]
4BSpiro SL
Spirochaetes
Spirochaetes
NCBI: Tax 267671
Leptospira interrogans
Strain: FiocruzL1130
Chr 1
cir
4,277,185 bp65.0%‑1.57%N/AN/AJ Bacteriol. 2004 Apr186(7):2164-72
2004 Apr
[Abstract] | [PubMed] | [NCBI Entrez]
BSpiro SL
Spirochaetes
Spirochaetes
NCBI: Tax 267671
Chr 2
cir
350,181 bp65.0%‑2.24%N/AN/AJ Bacteriol. 2004 Apr186(7):2164-72
2004 Apr
[Abstract] | [PubMed] | [NCBI Entrez]
5BSpiro SS
Spirochaetes
Spirochaetes
NCBI: Tax 243275
Treponema denticola
Strain: ATCC35405
Main
cir
2,843,201 bp62.1%‑0.91%N/AN/AProc Natl Acad Sci U S A. 2004 Apr 13101(15):5646-51. Epub 2004 Apr 2
2004 Apr 13
[Abstract] | [PubMed] | [NCBI Entrez]
6BSpiro SS
Spirochaetes
Spirochaetes
NCBI: Tax 243276
Treponema pallidum
Strain: Nichols
Main
cir
1,138,011 bp47.2%‑6.41%N/AN/AScience. 1998 Jul 17281(5375):375-88
1998 Jul 17
[Abstract] | [PubMed] | [NCBI Entrez]



CORRESPONDENCE:

Scientific questions: David W. Ussery       Peter Fischer Hallin