[login]

Selection summary: 17 segments, 17 strains, 10 species, 7 genera

Available tables

Row Organism Click to show species Sub-strain Segment Click to show segment Taxgroup Perf OBS% Perf EXP% Perf RATIO Quasi OBS% Quasi EXP% Quasu RATIO Quasu Perf RATIO Size(bp) %AT Cruciform Atlas Link Reference         1 Anabaena nostoc Strain: PCC7120 Main cir BCyano NN Cyanobacteria Nostocales NCBI: Tax 103690 N/A% N/A% N/A N/A% N/A% N/A N/A 6,413,771 bp 58.7% Cruciform Atlas DNA Res. 2001 Oct 31;8(5):205-13,  8(5):205-13; 227-53 2001 Oct 31 [Abstract] | [PubMed] | [NCBI Entrez] 2 Anabaena variabilis Strain: ATCC29413 Main cir BCyano NN Cyanobacteria Nostocales NCBI: Tax 240292 N/A% N/A% N/A N/A% N/A% N/A N/A 6,365,727 bp 58.6% Cruciform Atlas Unpublished [NCBI Entrez] 3 Cyanobacteria bacterium Strain: YellowstoneA Main cir BCyano CS Cyanobacteria Chroococcales NCBI: Tax 321327 N/A% N/A% N/A N/A% N/A% N/A N/A 2,932,766 bp 39.8% Cruciform Atlas Appl Environ Microbiol. 2006 Jan,  72(1):544-50 2006 Jan [Abstract] | [PubMed] 4 Cyanobacteria bacterium Strain: YellowstoneB Main cir BCyano CS Cyanobacteria Chroococcales NCBI: Tax 321332 N/A% N/A% N/A N/A% N/A% N/A N/A 3,046,682 bp 41.6% Cruciform Atlas Appl Environ Microbiol. 2006 Jan,  72(1):544-50 2006 Jan [Abstract] | [PubMed] 5 Gloeobacter violaceus Strain: PCC7421 Main cir BCyano GG Cyanobacteria Gloeobacteria NCBI: Tax 251221 N/A% N/A% N/A N/A% N/A% N/A N/A 4,659,019 bp 38.0% Cruciform Atlas DNA Res. 2003 Aug 31,  10(4):137-45 2003 Aug 31 [Abstract] | [PubMed] | [NCBI Entrez] 6 Prochlorococcus marinus Strain: MED4 Main cir BCyano PP Cyanobacteria Prochlorales NCBI: Tax 59919 N/A% N/A% N/A N/A% N/A% N/A N/A 1,657,990 bp 69.2% Cruciform Atlas Nature. 2003 Aug 28,  424(6952):1042-7. Epub 2003 Aug 13 2003 Aug 28 [Abstract] | [PubMed] | [NCBI Entrez] 7 Prochlorococcus marinus Strain: MIT9312 Main cir BCyano PP Cyanobacteria Prochlorales NCBI: Tax 74546 N/A% N/A% N/A N/A% N/A% N/A N/A 1,709,204 bp 68.8% Cruciform Atlas Unpublished [NCBI Entrez] 8 Prochlorococcus marinus Strain: MIT9313 Main cir BCyano PP Cyanobacteria Prochlorales NCBI: Tax 74547 N/A% N/A% N/A N/A% N/A% N/A N/A 2,410,873 bp 49.3% Cruciform Atlas Nature. 2003 Aug 28,  424(6952):1042-7. Epub 2003 Aug 13 2003 Aug 28 [Abstract] | [PubMed] | [NCBI Entrez] 9 Prochlorococcus marinus Strain: NATL2A Main cir BCyano PP Cyanobacteria Prochlorales NCBI: Tax 59920 N/A% N/A% N/A N/A% N/A% N/A N/A 1,842,899 bp 64.9% Cruciform Atlas Unpublished [NCBI Entrez] 10 Prochlorococcus marinus Strain: SS120 Main cir BCyano PP Cyanobacteria Prochlorales NCBI: Tax 167539 1.223% 1.173% 0.00 1.043% 0.028% 0.02 0.00 1,751,080 bp 63.6% Cruciform Atlas Proc Natl Acad Sci U S A. 2003 Aug 19,  100(17):10020-5. Epub 2003 Aug 13 2003 Aug 19 [Abstract] | [PubMed] | [NCBI Entrez] 11 Synechococcus elongatus Strain: PCC6301 Main cir BCyano CS Cyanobacteria Chroococcales NCBI: Tax 269084 N/A% N/A% N/A N/A% N/A% N/A N/A 2,696,255 bp 44.5% Cruciform Atlas Unpublished [NCBI Entrez] 12 Synechococcus elongatus Strain: PCC7942 Main cir BCyano CS Cyanobacteria Chroococcales NCBI: Tax 1140 N/A% N/A% N/A N/A% N/A% N/A N/A 2,695,903 bp 44.5% Cruciform Atlas Unpublished [NCBI Entrez] 13 Synechococcus sp Strain: WH8102 Main cir BCyano CS Cyanobacteria Chroococcales NCBI: Tax 84588 1.564% 1.285% 0.00 1.217% 0.027% 0.02 0.00 2,434,428 bp 40.6% Cruciform Atlas Nature. 2003 Aug 28,  424(6952):1037-42. Epub 2003 Aug 13 2003 Aug 28 [Abstract] | [PubMed] | [NCBI Entrez] 14 Synechococcus species Strain: CC9605 Main cir BCyano CS Cyanobacteria Chroococcales NCBI: Tax 110662 N/A% N/A% N/A N/A% N/A% N/A N/A 2,510,659 bp 40.8% Cruciform Atlas Unpublished [NCBI Entrez] 15 Synechococcus species Strain: CC9902 Main cir BCyano CS Cyanobacteria Chroococcales NCBI: Tax 316279 N/A% N/A% N/A N/A% N/A% N/A N/A 2,234,828 bp 45.8% Cruciform Atlas Unpublished [NCBI Entrez] 16 Synechocystis species Strain: PCC6803 Main cir BCyano CS Cyanobacteria Chroococcales NCBI: Tax 1148 N/A% N/A% N/A N/A% N/A% N/A N/A 3,573,470 bp 52.3% Cruciform Atlas DNA Res. 1995 Aug 31,  2(4):153-66, 191-8 1995 Aug 31 [Abstract] | [PubMed] | [NCBI Entrez] 17 Thermosynechococcus elongatus Strain: BP1 Main cir BCyano CT Cyanobacteria Chroococcales NCBI: Tax 197221 0.767% 0.816% 0.00 0.940% 0.011% 0.01 0.00 2,593,857 bp 46.1% Cruciform Atlas Unpublished [NCBI Entrez]

---

CORRESPONDENCE:

Scientific questions: David W. Ussery       Peter Fischer Hallin      

---