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Selection summary: 4 segments, 1 strain, 1 species, 1 genus  Close the kingdom view of Eukaryotes and return to index
Available tables

Bias of purines and pyr/pur tracts in Sequenced Genomes

Genome Atlas Database - EUKARYOTES

Alveolata Choanoflagellida Cryptophyta
Euglenozoa Fungi/Metazoa Microsporidia
Mycetozoa Rhodophyta Stramenopiles
Viridiplantae unclassified
Search:

RowReference

Organism
Click to show species
Sub-strain
Taxgroup
Segment
Click to show segment
Purine
Stretches
Pyr/Pur
Stretches
Size(bp)
%AT
     
1Unpublished
Schizosaccharomyces pombe
Strain: 972
EFAS
Fungi/Metazoa
Fungi
NCBI: Tax 4896
Chr 1
unknown
3.41%0.63%5,570,797 bp63.9%
Unpublished
EFAS
Fungi/Metazoa
Fungi
NCBI: Tax 4896
Chr 2
unknown
3.36%0.68%4,468,099 bp64.0%
Unpublished
EFAASSS
Fungi/Metazoa
Fungi
NCBI: Tax 4896
mtDNA
cir
2.93%0.98%19,431 bp69.9%
Unpublished
EFAS
Fungi/Metazoa
Fungi
NCBI: Tax 4896
Chr 3
unknown
3.73%0.70%2,456,786 bp63.7%

REFERENCES

  • David Ussery, Dikeos Mario Soumpasis, Søren Brunak, Hans-Henrik Stærfeldt, Peder Worning, and Anders Krogh (2002). Bias of Purine Stretches in Sequenced Genomes Computers in Chemistry 26:531-541 PDF | Pubmed
  • Peter F. Hallin and David Ussery (2004). CBS Genome Atlas Database: A dynamic storage for bioinformatic results and sequence data Bioinformatics 20:3682-3686 PDF | Pubmed



CORRESPONDENCE:

Scientific questions: David W. Ussery       Peter Fischer Hallin