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Selection summary: 8 segments, 6 strains, 5 species, 3 genera

Available tables

Row Organism Click to show species Sub-strain Segment Click to show segment Links Size(bp) %AT EasyGene Predictions Glimmer2 Predictions GeneMark Predictions Annotation according to accession Reference         1 Treponema pallidum Strain: Nichols Main cir CBS Download NCBI Entrez 1,138,011 bp 47.2% 951 ORFs ORFs | Proteins  EasyGene GFF file 1073 ORFs ORFs | Proteins Glimmer2 PTT file 1009 ORFs ORFs | Proteins  GeneMark PTT file 1,031 genes ORFs ORFs | Proteins Science. 1998 Jul 17,  281(5375):375-88 1998 Jul 17 [Abstract] | [PubMed] | [NCBI Entrez] 2 Treponema denticola Strain: ATCC35405 Main cir CBS Download NCBI Entrez 2,843,201 bp 62.1% N/A 2697 ORFs ORFs | Proteins Glimmer2 PTT file 2778 ORFs ORFs | Proteins  GeneMark PTT file 2,767 genes ORFs ORFs | Proteins Proc Natl Acad Sci U S A. 2004 Apr 13,  101(15):5646-51. Epub 2004 Apr 2 2004 Apr 13 [Abstract] | [PubMed] | [NCBI Entrez] 3 Leptospira interrogans Strain: FiocruzL1130 Chr 2 cir CBS Download NCBI Entrez 350,181 bp 65.0% N/A 0 ORFs ORFs | Proteins Glimmer2 PTT file 0 ORFs ORFs | Proteins  GeneMark PTT file 264 genes ORFs ORFs | Proteins J Bacteriol. 2004 Apr,  186(7):2164-72 2004 Apr [Abstract] | [PubMed] | [NCBI Entrez] Chr 1 cir CBS Download NCBI Entrez 4,277,185 bp 65.0% N/A 0 ORFs ORFs | Proteins Glimmer2 PTT file 0 ORFs ORFs | Proteins  GeneMark PTT file 3,394 genes ORFs ORFs | Proteins J Bacteriol. 2004 Apr,  186(7):2164-72 2004 Apr [Abstract] | [PubMed] | [NCBI Entrez] 4 Leptospira interrogans Strain: 56601 Chr 2 cir CBS Download NCBI Entrez 358,943 bp 64.9% 286 ORFs ORFs | Proteins  EasyGene GFF file 351 ORFs ORFs | Proteins Glimmer2 PTT file 347 ORFs ORFs | Proteins  GeneMark PTT file 367 genes ORFs ORFs | Proteins Nature. 2003 Apr 24,  422(6934):888-93 2003 Apr 24 [Abstract] | [PubMed] | [NCBI Entrez] Chr 1 cir CBS Download NCBI Entrez 4,332,241 bp 65.0% 3182 ORFs ORFs | Proteins  EasyGene GFF file 4071 ORFs ORFs | Proteins Glimmer2 PTT file 4150 ORFs ORFs | Proteins  GeneMark PTT file 4,358 genes ORFs ORFs | Proteins Nature. 2003 Apr 24,  422(6934):888-93 2003 Apr 24 [Abstract] | [PubMed] | [NCBI Entrez] 5 Borrelia garinii Strain: PBi Main lin CBS Download NCBI Entrez 904,246 bp 71.7% N/A ORFs ORFs | Proteins Glimmer2 PTT file ORFs ORFs | Proteins  GeneMark PTT file 832 genes ORFs ORFs | Proteins Nucleic Acids Res. 2004 Nov 16,  32(20):6038-46. Print 2004 2004 Nov 16 [Abstract] | [PubMed] | [NCBI Entrez] 6 Borrelia burgdorferi Strain: B31 Main lin CBS Download NCBI Entrez 910,724 bp 71.4% ORFs ORFs | Proteins  EasyGene GFF file ORFs ORFs | Proteins Glimmer2 PTT file ORFs ORFs | Proteins  GeneMark PTT file 850 genes ORFs ORFs | Proteins Nature. 1997 Dec 11,  390(6660):580-6 1997 Dec 11 [Abstract] | [PubMed] | [NCBI Entrez]

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CORRESPONDENCE:

Scientific questions: David W. Ussery       Peter Fischer Hallin      

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