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Selection summary: 8 segments, 6 strains, 5 species, 3 genera

Available tables

Row Organism Click to show species Sub-strain Taxgroup Segment Click to show segment %AT Size(bp) Number of genes Coding density Estimated # Proteins Fraction Prot.Length Distribution Reference         1 Treponema pallidum Strain: Nichols BSpiro SS Spirochaetes Spirochaetes NCBI: Tax 243276 Main cir 47.2% 1,138,011 bp 1,031 genes 92.1% 1,104 bp/gene 983 genes 4.9% Protein Lengths Science. 1998 Jul 17,  281(5375):375-88 1998 Jul 17 [Abstract] | [PubMed] | [NCBI Entrez] 2 Treponema denticola Strain: ATCC35405 BSpiro SS Spirochaetes Spirochaetes NCBI: Tax 243275 Main cir 62.1% 2,843,201 bp 2,767 genes 91.5% 1,028 bp/gene 2,157 genes 28.3% Protein Lengths Proc Natl Acad Sci U S A. 2004 Apr 13,  101(15):5646-51. Epub 2004 Apr 2 2004 Apr 13 [Abstract] | [PubMed] | [NCBI Entrez] 3 Leptospira interrogans Strain: FiocruzL1130 BSpiro SL Spirochaetes Spirochaetes NCBI: Tax 267671 Chr 2 cir 65.0% 350,181 bp 264 genes 74.4% 1,326 bp/gene 223 genes 18.4% Protein Lengths J Bacteriol. 2004 Apr,  186(7):2164-72 2004 Apr [Abstract] | [PubMed] | [NCBI Entrez] BSpiro SL Spirochaetes Spirochaetes NCBI: Tax 267671 Chr 1 cir 65.0% 4,277,185 bp 3,394 genes 74.7% 1,260 bp/gene 2,657 genes 27.7% Protein Lengths J Bacteriol. 2004 Apr,  186(7):2164-72 2004 Apr [Abstract] | [PubMed] | [NCBI Entrez] 4 Leptospira interrogans Strain: 56601 BSpiro SL Spirochaetes Spirochaetes NCBI: Tax 189518 Chr 2 cir 64.9% 358,943 bp 367 genes 79.6% 978 bp/gene 240 genes 52.9% Protein Lengths Nature. 2003 Apr 24,  422(6934):888-93 2003 Apr 24 [Abstract] | [PubMed] | [NCBI Entrez] BSpiro SL Spirochaetes Spirochaetes NCBI: Tax 189518 Chr 1 cir 65.0% 4,332,241 bp 4,358 genes 77.9% 994 bp/gene 2,748 genes 58.6% Protein Lengths Nature. 2003 Apr 24,  422(6934):888-93 2003 Apr 24 [Abstract] | [PubMed] | [NCBI Entrez] 5 Borrelia garinii Strain: PBi BSpiro SS Spirochaetes Spirochaetes NCBI: Tax 290434 Main lin 71.7% 904,246 bp 832 genes 92.7% 1,087 bp/gene 749 genes 11.1% Protein Lengths Nucleic Acids Res. 2004 Nov 16,  32(20):6038-46. Print 2004 2004 Nov 16 [Abstract] | [PubMed] | [NCBI Entrez] 6 Borrelia burgdorferi Strain: B31 BSpiro SS Spirochaetes Spirochaetes NCBI: Tax 224326 Main lin 71.4% 910,724 bp 850 genes 93.3% 1,071 bp/gene 762 genes 11.5% Protein Lengths Nature. 1997 Dec 11,  390(6660):580-6 1997 Dec 11 [Abstract] | [PubMed] | [NCBI Entrez]

REFERENCES

• Marie Skovgaard, Lars Juhl Jensen, Søren Brunak, David W. Ussery, and Anders Krogh (2001). On the Total Number of Genes and Their Length Distribution in Complete Microbial Genomes Trends in Genetics 17:425-428. PDF | Pubmed
• Peter F. Hallin and David Ussery (2004). CBS Genome Atlas Database: A dynamic storage for bioinformatic results and sequence data Bioinformatics 20:3682-3686 PDF | Pubmed

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