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Selection summary: 8 segments, 6 strains, 5 species, 3 genera

Available tables

Row Organism Click to show species Sub-strain Taxgroup Segment Click to show segment %AT Size(bp) Number of genes Total Cytoplasmic TMHMM Secreted Proteins [TOTAL] Signal Peptides LipoP TATP Predictions SecretomeP Fimbria Reference         1 Treponema pallidum Strain: Nichols BSpiro SS Spirochaetes Spirochaetes NCBI: Tax 243276 Main cir 47.2% 1,138,011 bp 1,031 genes Results 739 159 sequence 133 sequence 91 sequence 23 sequence 2 sequence 17 sequence 0 Science. 1998 Jul 17,  281(5375):375-88 1998 Jul 17 [Abstract] | [PubMed] | [NCBI Entrez] 2 Treponema denticola Strain: ATCC35405 BSpiro SS Spirochaetes Spirochaetes NCBI: Tax 243275 Main cir 62.1% 2,843,201 bp 2,767 genes Results 1888 509 sequence 370 sequence 272 sequence 10 sequence 0 88 sequence 0 Proc Natl Acad Sci U S A. 2004 Apr 13,  101(15):5646-51. Epub 2004 Apr 2 2004 Apr 13 [Abstract] | [PubMed] | [NCBI Entrez] 3 Leptospira interrogans Strain: FiocruzL1130 BSpiro SL Spirochaetes Spirochaetes NCBI: Tax 267671 Chr 2 cir 65.0% 350,181 bp 264 genes Results 171 61 sequence 32 sequence 19 sequence 2 sequence 0 11 sequence 0 J Bacteriol. 2004 Apr,  186(7):2164-72 2004 Apr [Abstract] | [PubMed] | [NCBI Entrez] BSpiro SL Spirochaetes Spirochaetes NCBI: Tax 267671 Chr 1 cir 65.0% 4,277,185 bp 3,394 genes Results 2387 545 sequence 462 sequence 228 sequence 92 sequence 0 139 sequence 3 sequence J Bacteriol. 2004 Apr,  186(7):2164-72 2004 Apr [Abstract] | [PubMed] | [NCBI Entrez] 4 Leptospira interrogans Strain: 56601 BSpiro SL Spirochaetes Spirochaetes NCBI: Tax 189518 Chr 2 cir 64.9% 358,943 bp 367 genes Results 262 67 sequence 38 sequence 18 sequence 1 sequence 0 19 sequence 0 Nature. 2003 Apr 24,  422(6934):888-93 2003 Apr 24 [Abstract] | [PubMed] | [NCBI Entrez] BSpiro SL Spirochaetes Spirochaetes NCBI: Tax 189518 Chr 1 cir 65.0% 4,332,241 bp 4,358 genes Results 3274 571 sequence 513 sequence 240 sequence 78 sequence 0 192 sequence 3 sequence Nature. 2003 Apr 24,  422(6934):888-93 2003 Apr 24 [Abstract] | [PubMed] | [NCBI Entrez] 5 Borrelia garinii Strain: PBi BSpiro SS Spirochaetes Spirochaetes NCBI: Tax 290434 Main lin 71.7% 904,246 bp 832 genes Results 618 152 sequence 62 sequence 42 sequence 9 sequence 0 11 sequence 0 Nucleic Acids Res. 2004 Nov 16,  32(20):6038-46. Print 2004 2004 Nov 16 [Abstract] | [PubMed] | [NCBI Entrez] 6 Borrelia burgdorferi Strain: B31 BSpiro SS Spirochaetes Spirochaetes NCBI: Tax 224326 Main lin 71.4% 910,724 bp 850 genes Results 625 150 sequence 75 sequence 52 sequence 14 sequence 0 9 sequence 0 Nature. 1997 Dec 11,  390(6660):580-6 1997 Dec 11 [Abstract] | [PubMed] | [NCBI Entrez]

REFERENCES

• #authors# (#year#). #title# #journal# #location#
• Peter F. Hallin and David Ussery (2004). CBS Genome Atlas Database: A dynamic storage for bioinformatic results and sequence data Bioinformatics 20:3682-3686 PDF | Pubmed

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