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Selection summary: 5 segments, 4 strains, 3 species, 2 genera

Available tables

Row Organism Click to show species Sub-strain Taxgroup Segment Click to show segment %AT Size(bp) Number of genes Total Cytoplasmic TMHMM Secreted Proteins [TOTAL] Signal Peptides LipoP TATP Predictions SecretomeP Fimbria Reference         1 Thermus thermophilus Strain: HB8 BDDT Deinococcus-Thermus Deinococci NCBI: Tax 300852 Main cir 30.5% 1,849,742 bp 1,973 genes Results 1468 323 sequence 182 sequence 130 sequence 20 sequence 12 sequence 15 sequence 5 sequence Unpublished [NCBI Entrez] 2 Thermus thermophilus Strain: HB27 BDDT Deinococcus-Thermus Deinococci NCBI: Tax 262724 Main cir 30.6% 1,894,877 bp 1,982 genes Results 1472 328 sequence 182 sequence 131 sequence 22 sequence 12 sequence 9 sequence 8 sequence Nat Biotechnol. 2004 May,  22(5):547-53. Epub 2004 Apr 4 2004 May [Abstract] | [PubMed] | [NCBI Entrez] 3 Deinococcus radiodurans Strain: R1 BDDD Deinococcus-Thermus Deinococci NCBI: Tax 243230 Chr 2 cir 33.3% 412,348 bp 357 genes Results 240 51 sequence 66 sequence 40 sequence 5 sequence 2 sequence 19 sequence 0 Science. 1999 Nov 19,  286(5444):1571-7 1999 Nov 19 [Abstract] | [PubMed] | [NCBI Entrez] BDDD Deinococcus-Thermus Deinococci NCBI: Tax 243230 Chr 1 cir 33.0% 2,648,638 bp 2,579 genes Results 1662 399 sequence 518 sequence 299 sequence 42 sequence 4 sequence 170 sequence 3 sequence Science. 1999 Nov 19,  286(5444):1571-7 1999 Nov 19 [Abstract] | [PubMed] | [NCBI Entrez] 4 Deinococcus geothermalis Strain: DSM11300 DSM11300 BDDD Deinococcus-Thermus Deinococci NCBI: Tax 319795 Main cir 33.4% 2,467,205 bp 2,335 genes Results 1602 360 sequence 373 sequence 251 sequence 38 sequence 9 sequence 72 sequence 3 sequence Unpublished

REFERENCES

• #authors# (#year#). #title# #journal# #location#
• Peter F. Hallin and David Ussery (2004). CBS Genome Atlas Database: A dynamic storage for bioinformatic results and sequence data Bioinformatics 20:3682-3686 PDF | Pubmed

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