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Selection summary: 5 segments, 4 strains, 3 species, 2 genera  Close the kingdom view of Bacteria and return to index
Available tables

Sigma Factor Predictions by profile HMM

Genome Atlas Database - BACTERIA

Acidobacteria Actinobacteria Aquificae
Bacteroidetes/Chlorobi Chlamydiae/Verrucomicrobia Chloroflexi
Cyanobacteria Deinococcus-Thermus Firmicutes
Fusobacteria Planctomycetes Proteobacteria
Spirochaetes Thermotogae unclassified
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RowSize(bp)
Organism
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Sigma 54 FactorsSigma 70 FactorsECF FactorsReference

     
1412,348 bpDeinococcus radiodurans
Strain: R1
Chr 2
cir
N/AN/AN/AScience. 1999 Nov 19286(5444):1571-7
1999 Nov 19
[Abstract] | [PubMed] | [NCBI Entrez]
21,849,742 bpThermus thermophilus
Strain: HB8
Main
cir
N/A1 predictedN/AUnpublished

[NCBI Entrez]
31,894,877 bpThermus thermophilus
Strain: HB27
Main
cir
N/A1 predictedN/ANat Biotechnol. 2004 May22(5):547-53. Epub 2004 Apr 4
2004 May
[Abstract] | [PubMed] | [NCBI Entrez]
42,467,205 bpDeinococcus geothermalis
Strain: DSM11300
DSM11300
Main
cir
N/A2 predicted3 predictedUnpublished
52,648,638 bpDeinococcus radiodurans
Strain: R1
Chr 1
cir
N/AN/A1 predictedScience. 1999 Nov 19286(5444):1571-7
1999 Nov 19
[Abstract] | [PubMed] | [NCBI Entrez]



CORRESPONDENCE:

Scientific questions: David W. Ussery       Peter Fischer Hallin