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Selection summary: 5 segments, 4 strains, 3 species, 2 genera

Available tables

Organism Sub-strain Segment(id) Click to go to segment Links %AT Size(bp) Periodicity Predicted Origin Number of genes tRNA count rRNA count Coding density Atlas Promoter analysis Reference T. thermophilus Strain: HB27 Genome 30.6% 2,127,482 bp 2,210 genes 0 5s 2 16s 2 23s 2 94.9% 956 bp/gene Nat Biotechnol. 2004 May,  22(5):547-53. Epub 2004 Apr 4 2004 May [Abstract] | [PubMed] | [NCBI Entrez] Main cir CBS Download NCBI Entrez 30.6% 1,894,877 bp Show 1,543 kbp 1,982 genes Codon Usage 5s 2 16s 2 23s 2 94.9% 956 bp/gene Genome (cir) Structure (cir) Repeat (cir) Base (cir) Cruciform (cir) Z-DNA (cir) A-DNA (cir) Show all atlases Promoter Nat Biotechnol. 2004 May,  22(5):547-53. Epub 2004 Apr 4 2004 May [Abstract] | [PubMed] | [NCBI Entrez] pTT27 cir CBS Download NCBI Entrez 30.8% 232,605 bp Show 62 kbp 228 genes Codon Usage 87.9% 1,020 bp/gene Genome (cir) Structure (cir) Repeat (cir) Base (cir) Cruciform (cir) Z-DNA (cir) A-DNA (cir) Show all atlases Promoter Nat Biotechnol. 2004 May,  22(5):547-53. Epub 2004 Apr 4 2004 May [NCBI Entrez]

REFERENCES

• Peter F. Hallin and David Ussery (2004). CBS Genome Atlas Database: A dynamic storage for bioinformatic results and sequence data Bioinformatics 20:3682-3686 PDF | Pubmed

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