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Selection summary: 5 segments, 4 strains, 3 species, 2 genera

Available tables

Organism Sub-strain Segment(id) Click to go to segment Links %AT Size(bp) Periodicity Predicted Origin Number of genes tRNA count rRNA count Coding density Atlas Promoter analysis Reference D. geothermalis Strain: DSM11300 DSM11300 Main cir CBS Download 33.4% 2,467,205 bp Show 6 kbp 2,335 genes Codon Usage 5s 3 16s 3 23s 3 90.3% 1,057 bp/gene Genome (cir) Structure (cir) Repeat (cir) Base (cir) Cruciform (cir) Z-DNA (cir) A-DNA (cir) Show all atlases Promoter Unpublished D. radiodurans Strain: R1 Chr 1 cir CBS Download NCBI Entrez 33.0% 2,648,638 bp 11.2 2,479 kbp 2,579 genes Codon Usage 5s 3 16s 3 23s 3 87.9% 1,027 bp/gene Genome (cir) Structure (cir) Repeat (cir) Base (cir) Cruciform (cir) Z-DNA (cir) A-DNA (cir) Show all atlases Promoter Science. 1999 Nov 19,  286(5444):1571-7 1999 Nov 19 [Abstract] | [PubMed] | [NCBI Entrez] Chr 2 cir CBS Download NCBI Entrez 33.3% 412,348 bp 10.0 171 kbp 357 genes Codon Usage 89.0% 1,155 bp/gene Genome (cir) Structure (cir) Repeat (cir) Base (cir) Cruciform (cir) Z-DNA (cir) A-DNA (cir) Show all atlases Promoter Science. 1999 Nov 19,  286(5444):1571-7 1999 Nov 19 [Abstract] | [PubMed] | [NCBI Entrez]

REFERENCES

• Peter F. Hallin and David Ussery (2004). CBS Genome Atlas Database: A dynamic storage for bioinformatic results and sequence data Bioinformatics 20:3682-3686 PDF | Pubmed

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