[login]

Selection summary: 8 segments, 6 strains, 5 species, 3 genera

Available tables

Organism Sub-strain Segment(id) Click to go to segment Links %AT Size(bp) Periodicity Predicted Origin Number of genes tRNA count rRNA count Coding density Atlas Promoter analysis Reference L. interrogans Strain: 56601 Genome 65.0% 4,691,184 bp 4,725 genes 0 5s 1 16s 2 23s 1 79.6% 978 bp/gene Nature. 2003 Apr 24,  422(6934):888-93 2003 Apr 24 [Abstract] | [PubMed] | [NCBI Entrez] Chr 2 cir CBS Download NCBI Entrez 64.9% 358,943 bp 10.4 [weak] 357 kbp 367 genes Codon Usage 79.6% 978 bp/gene Genome (cir) Structure (cir) Repeat (cir) Base (cir) Cruciform (cir) Z-DNA (cir) A-DNA (cir) Show all atlases Promoter Nature. 2003 Apr 24,  422(6934):888-93 2003 Apr 24 [Abstract] | [PubMed] | [NCBI Entrez] Chr 1 cir CBS Download NCBI Entrez 65.0% 4,332,241 bp 10.5 [weak] 4,332 kbp 4,358 genes Codon Usage 5s 1 16s 2 23s 1 77.9% 994 bp/gene Genome (cir) Structure (cir) Repeat (cir) Base (cir) Cruciform (cir) Z-DNA (cir) A-DNA (cir) Show all atlases Promoter Nature. 2003 Apr 24,  422(6934):888-93 2003 Apr 24 [Abstract] | [PubMed] | [NCBI Entrez]

REFERENCES

• Peter F. Hallin and David Ussery (2004). CBS Genome Atlas Database: A dynamic storage for bioinformatic results and sequence data Bioinformatics 20:3682-3686 PDF | Pubmed

CORRESPONDENCE: