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Selection summary: 5 segments, 4 strains, 3 species, 2 genera  Close the kingdom view of Bacteria and return to index
Available tables


Organism
Sub-strain
Segment(id)
Click to go to segment
Links%AT
Size(bp)
Periodicity
Predicted OriginNumber of
genes
tRNA count
rRNA count
Coding
density
Atlas
Promoter
analysis
Reference

D. geothermalis
Strain: DSM11300
DSM11300
Main
cir
CBS Download33.4%2,467,205 bpShowkbp2,335 genesCodon Usage5s 3
16s 3
23s 3
90.3%
1,057 bp/gene
Genome (cir)
Structure (cir)
Repeat (cir)
Base (cir)
Cruciform (cir)
Z-DNA (cir)
A-DNA (cir)
Show all atlases
PromoterUnpublished
p1
cir
CBS Download34.3%574,126 bpShow164 kbp522 genesCodon Usage5s 1
16s 1
23s 1
89.1%
1,100 bp/gene
Genome (cir)
Structure (cir)
Repeat (cir)
Base (cir)
Cruciform (cir)
Z-DNA (cir)
A-DNA (cir)
Show all atlases
PromoterUnpublished
Genome
33.5%3,041,331 bp2,857 genes05s 4
16s 4
23s 4
89.1%
1,100 bp/gene
Unpublished

REFERENCES

  • Peter F. Hallin and David Ussery (2004). CBS Genome Atlas Database: A dynamic storage for bioinformatic results and sequence data Bioinformatics 20:3682-3686 PDF | Pubmed



CORRESPONDENCE:

Scientific questions: David W. Ussery       Peter Fischer Hallin