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Selection summary: 11 segments, 11 strains, 7 species, 3 genera

Available tables

Genome Atlas Database - BACTERIA Acidobacteria Actinobacteria Aquificae Bacteroidetes/Chlorobi Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria Deinococcus-Thermus Firmicutes Fusobacteria Planctomycetes Proteobacteria Spirochaetes Thermotogae unclassified

Advanced Simple Search: Genus: Species: Strain: Segment: Segmentid: Show plasmids: Show merged segments:

Row Organism Click to show species Sub-strain Taxgroup Segment Click to show segment Links %AT Size(bp) Number of genes tRNA count rRNA count Reference         1 Chlamydia caviae Strain: GPIC BChlam CC Chlamydiae/Verrucomicrobia Chlamydiae NCBI: Tax 227941 Main cir CBS Download NCBI Entrez 60.8% 1,173,390 bp 998 genes Codon Usage 5s 1 16s 1 23s 1 Nucleic Acids Res. 2003 Apr 15,  31(8):2134-47 2003 Apr 15 [Abstract] | [PubMed] | [NCBI Entrez] 2 Chlamydia muridarum Strain: Nigg BChlam CC Chlamydiae/Verrucomicrobia Chlamydiae NCBI: Tax 243161 Main cir CBS Download NCBI Entrez 59.7% 1,072,950 bp 904 genes Codon Usage 5s 2 16s 2 23s 2 Nucleic Acids Res. 2000 Mar 15,  28(6):1397-406 2000 Mar 15 [Abstract] | [PubMed] | [NCBI Entrez] 3 Chlamydia trachomatis Strain: AHAR13 BChlam CC Chlamydiae/Verrucomicrobia Chlamydiae NCBI: Tax 315277 Main cir CBS Download NCBI Entrez 58.7% 1,044,459 bp 911 genes Codon Usage 5s 2 16s 2 23s 2 Infect Immun. 2005 Oct,  73(10):6407-18 2005 Oct [Abstract] | [PubMed] | [NCBI Entrez] 4 Chlamydia trachomatis Strain: DUW BChlam CC Chlamydiae/Verrucomicrobia Chlamydiae NCBI: Tax 272561 Main cir CBS Download NCBI Entrez 58.7% 1,042,519 bp 894 genes Codon Usage 5s 2 16s 2 23s 2 Science. 1998 Oct 23,  282(5389):754-9 1998 Oct 23 [Abstract] | [PubMed] | [NCBI Entrez] 5 Chlamydophila abortus Strain: S26-3 BChlam CC Chlamydiae/Verrucomicrobia Chlamydiae NCBI: Tax 218497 Main cir CBS Download NCBI Entrez 60.1% 1,144,377 bp 961 genes Codon Usage 5s 1 16s 1 23s 1 Genome Res. 2005 May,  15(5):629-40. Epub 2005 Apr 18 2005 May [NCBI Entrez] 6 Chlamydophila felis Strain: FeC56 BChlam CC Chlamydiae/Verrucomicrobia Chlamydiae NCBI: Tax 264202 Main cir CBS Download 60.6% 1,166,239 bp 1,005 genes Codon Usage 5s 1 16s 1 23s 1 Unpublished 7 Chlamydophila pneumoniae Strain: AR39 BChlam CC Chlamydiae/Verrucomicrobia Chlamydiae NCBI: Tax 115711 Main cir CBS Download NCBI Entrez 59.4% 1,229,853 bp 1,110 genes Codon Usage 5s 1 16s 1 23s 1 Nucleic Acids Res. 2000 Mar 15,  28(6):1397-406 2000 Mar 15 [Abstract] | [PubMed] | [NCBI Entrez] 8 Chlamydophila pneumoniae Strain: CWL029 BChlam CC Chlamydiae/Verrucomicrobia Chlamydiae NCBI: Tax 115713 Main cir CBS Download NCBI Entrez 59.4% 1,230,230 bp 1,052 genes Codon Usage 5s 1 16s 1 23s 1 Nat Genet. 1999 Apr,  21(4):385-9 1999 Apr [Abstract] | [PubMed] | [NCBI Entrez] 9 Chlamydophila pneumoniae Strain: J138 BChlam CC Chlamydiae/Verrucomicrobia Chlamydiae NCBI: Tax 138677 Main cir CBS Download NCBI Entrez 59.4% 1,226,565 bp 1,069 genes Codon Usage 5s 1 16s 1 23s 1 J Infect Dis. 2000 Jun,  181 Suppl 3:S524-7 2000 Jun [Abstract] | [PubMed] | [NCBI Entrez] 10 Chlamydophila pneumoniae Strain: TW183 BChlam CC Chlamydiae/Verrucomicrobia Chlamydiae NCBI: Tax 182082 Main cir CBS Download NCBI Entrez 59.4% 1,225,935 bp 1,113 genes Codon Usage 5s 1 16s 1 23s 1 Unpublished [NCBI Entrez] 11 Parachlamydia species Strain: UWE25 BChlam CP Chlamydiae/Verrucomicrobia Chlamydiae NCBI: Tax 264201 Main cir CBS Download NCBI Entrez 65.3% 2,414,465 bp 2,031 genes Codon Usage 5s 3 16s 3 23s 2 Science. 2004 Apr 30,  304(5671):728-30. Epub 2004 Apr 8 2004 Apr 30 [Abstract] | [PubMed] | [NCBI Entrez]

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REFERENCES

• Peter F. Hallin and David Ussery (2004). CBS Genome Atlas Database: A dynamic storage for bioinformatic results and sequence data Bioinformatics 20:3682-3686 PDF | Pubmed

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CORRESPONDENCE:

Scientific questions: David W. Ussery       Peter Fischer Hallin      

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