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Selection summary: 5 segments, 4 strains, 3 species, 2 genera

Available tables

Genome Atlas Database - BACTERIA Acidobacteria Actinobacteria Aquificae Bacteroidetes/Chlorobi Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria Deinococcus-Thermus Firmicutes Fusobacteria Planctomycetes Proteobacteria Spirochaetes Thermotogae unclassified

Advanced Simple Search: Genus: Species: Strain: Segment: Segmentid: Show plasmids: Show merged segments:

Row Number of genes Size(bp) Taxgroup Organism Click to show species Sub-strain Segment Click to show segment Links %AT tRNA count rRNA count Reference         1 2,579 genes 2,648,638 bp BDDD Deinococcus-Thermus Deinococci NCBI: Tax 243230 Deinococcus radiodurans Strain: R1 Chr 1 cir CBS Download NCBI Entrez 33.0% Codon Usage 5s 3 16s 3 23s 3 Science. 1999 Nov 19,  286(5444):1571-7 1999 Nov 19 [Abstract] | [PubMed] | [NCBI Entrez] 2 2,335 genes 2,467,205 bp BDDD Deinococcus-Thermus Deinococci NCBI: Tax 319795 Deinococcus geothermalis Strain: DSM11300 DSM11300 Main cir CBS Download 33.4% Codon Usage 5s 3 16s 3 23s 3 Unpublished 3 1,982 genes 1,894,877 bp BDDT Deinococcus-Thermus Deinococci NCBI: Tax 262724 Thermus thermophilus Strain: HB27 Main cir CBS Download NCBI Entrez 30.6% Codon Usage 5s 2 16s 2 23s 2 Nat Biotechnol. 2004 May,  22(5):547-53. Epub 2004 Apr 4 2004 May [Abstract] | [PubMed] | [NCBI Entrez] 4 1,973 genes 1,849,742 bp BDDT Deinococcus-Thermus Deinococci NCBI: Tax 300852 Thermus thermophilus Strain: HB8 Main cir CBS Download NCBI Entrez 30.5% Codon Usage 5s 2 16s 2 23s 2 Unpublished [NCBI Entrez] 5 357 genes 412,348 bp BDDD Deinococcus-Thermus Deinococci NCBI: Tax 243230 Deinococcus radiodurans Strain: R1 Chr 2 cir CBS Download NCBI Entrez 33.3% Codon Usage Science. 1999 Nov 19,  286(5444):1571-7 1999 Nov 19 [Abstract] | [PubMed] | [NCBI Entrez]

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REFERENCES

• Peter F. Hallin and David Ussery (2004). CBS Genome Atlas Database: A dynamic storage for bioinformatic results and sequence data Bioinformatics 20:3682-3686 PDF | Pubmed

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CORRESPONDENCE:

Scientific questions: David W. Ussery       Peter Fischer Hallin      

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