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CBS >> CBS Prediction Servers >> GenomeAtlas >> Archaea >> Methanosarcina >> barkeri >> rRNA Prediction for Methanosarcina barkeri strain fusaro, 1


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Selection summary: 28 segments, 27 strains, 27 species, 20 genera  Close the kingdom view of Archaea and return to index
Available tables
Methanosarcina barkeri fusaro 1 Close the view of this segment and return to your kingdom search
Atlases of DNA properties
DNA Analysis related to Segment Table
 

Predicted LSU ribosomal RNA for Methanosarcina barkeri strain fusaro, 1

Get sequences as a FASTA file

Archaea/Methanosarcina/barkeri/fusaro/1/Mbarkeri_fusaro_1.rnammer.lsu.fsa
>23s_rRNA_[E:0;score:2904.8]_CP000099_[...]
ATTATGCTATCAGGTGGATGGCTCGGCTCAAGAGCTGATGAAGGACGTGCCAAGCTGCGA
TAAGCCCGGGGTAGGTGCAAGGAGCCTATGAACCCGGGATTTCCGAATGGGACCTCTCCA
TAGTGATCAGTAATGATCGGGAACGCTCCGAATTGAAACATCTCAGTAGGAGCAGGAAAA
GAAATCAACCGAGATACCGTGAGTAACGGCGAGTGAAAACGGCACAGTTCAAACCGAATC
CCTTCACAGGGAAATGTGGTGTTGTAGGGCTGTTCAAACGTCTGGCGGCTAAACAGAACT
TGCCTGAAACGGCAGACCGTAGAGTGTGACAGTCACGTATGTGTAAACCAAAAGATCGGA
ACATGTCCCTGAGTACCGTGCGTTGGATATCGTGCGGGAATCTGGGGGGCACCAACCTCC
AAAACTAAATACTACTTGAGACCGATAGCGAAATAGTAGGGTGACCGAACGCTGAAAAGT
ACCCCGAGAAGGGAGGTGCAAAGTGCCTGAAACCTGATAGTGATGGAACGATACGGCATT
AAAGGAACTCTGACATGAAGGAAACATTCGCGAGAATGCTGTACGAATGTCACTGCCAGT
GTCGTATCTTACGTTTTGAAGAACGGGCCAGGGAGTTTATCTCAGTGGCAATGGCTAACC
TTTATTTGGGCAGCCGAAGCGAAAGCAACATGTGCGCAGCTCTCCGAGCGAGGCACGACG
TATACAAGTGCGTGGAGTCACTGGGGTAAGACCCGAAGCCGGGTGATCTAGGCGTGGGCA
GGTTGAAGCGTGGCGAAAGCTACGTGGAGGACCGCAAGCGGTATTGATCTGCAAATCATT
CGTGTGACCTGCGTCTCGTAGTGAAATGCTAATCTAACCCGGCATCCGCTGGTTCCTTCC
AAAACATGTCGCAGCATGACCTGACTGGAGATCGTCGGTGGAGTAGAGCACTGATTGGCG
ATTCCGGGGGGGAAACTCCTCGCTCGCCTGTCAAACTCCAAACCCACCGTCATTGTAGAA
AGTCGGAGTCCGGACTGCTGGGGTAAGCTTGTAGTCCGTAAGGGAGACAACCCATCCCGT
GGTTAAGGTCCCCAAGTGTCGACTAAGTGTTAATACTAAAGGGCGTCCCAAGCCCAAGAC
AGCTGGAAGGTTAGCTTAGAAGCAGCTACCCTTTAAAGAGTGCGTAACAGCTCACCAGTC
GAGGTTTGGGGCCCCGAAAATTGACGGGGCTCAAGTCGACCACCGATACCACGGAGTACC
GCAAGGTAATCTCGTAGGAAGGCGTTGCGTTCGGGCCGAAGCAGGGCTGTAAAGTCCTGT
GGACCGTTCGCAAACGAAAATCCTGGTAATAGTAGCAGCAAAGCAGGGTGAGAATCCCTG
CCGCCGAAGGGGCCAGGTTTCCTCGGCAATGATCGTCAGCCGAGGGTTAGTCGGTCCTAA
GACGTACCGTAACTCGAGTACGCCGAAAGGGAAACAGGTTAATATTCCTGTACCATTTAG
CAATCCGTCTGACGTCTCTGGGCAGACCGAGCGGCGTCGTCGCGCCGTCTAAGCAGCGAA
CCCCGTGGAGAGCCGTAATGGCGAGAATCGGGCGAATCTGTTATGGCTAAAGTCGGTCGC
ACCCCGGGACCCGTGAAAAGGCCGCTAAATGTCCGTACCAAGATCTGACACTGGTGCCCC
TAGCTGAAAAGGCTAAGGCGTGTCGGAGTACTTCAGTTAAGGGAATTCGGCAAATTAGCT
CCGTAACTTCGGGATAAGGAGTGCCTGCTGTGGAGACAGCAGGTCGCAGTGACCAGGGGG
CTCTAACTGTCTAATACCAACATAGGAGATTGCAAACCCGTAAGGGCTAGTACAATCTCT
GAATCCTGCTCAGTGCAGGTACCTGAAACCCCGTTTCAACGGGACGAAGGGCCTGTAAAC
AGCGGGGGTAACTATGACCCTCTTAAGGTAGCGTAGTACCTTGTCGCTTAATTGGCGACT
TGCATGAATGGATCAATGAGAGCCCTACTGTCCCTAACTGGAATCCGGTGAAGCTTACAT
TCTAGTGCACAGTCTAGAGACCTCTAGGGGGAAGTGAAGACCCCGTGGAGCTTTACTGCA
GCCTGTCGCTGGGTTGTGGTTCTGGATGTACAGAGTAGGTAGGAGGCATCGAAGCGTATG
CGCCAGCATACGTGGAGCCGCAATTGGGACACTACCCTTCTGGGACTACGACCCTAACTC
TGAGAAGAGGACCCCGATAGGTGGGCAGTTTGCCTGGGGCGGGACGCCCTTGAAAAGATA
TCAAGGGCGCGCAATGGTTGACTCAAGCGGGTCGGAAACTCGCTGAAGAGTGCAAGAGCA
TAAGTCAGCCTGACGTTATTCAGCATAGCAGTGGATGACGAGACGAAAGTCGGCTCTAGC
GAACTTTTGAGCCTCCTTGGTGGGGGCCAAAAATGACAGAAAAGTTACCCCGGGGATAAT
TGAGTCGTTGCCGGCAAGAGTACATATCGACCCGGCAGCTTGCTACCTCGATGTCGGTTC
TTTCCATCCTGGCCGTGCAGCAGCGGCCAAGGGTGAGGTTGTTCGCCTATTAAAGGAGAT
CGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTCGGTTACTATCTACTAGAGGTGCACGA
GGTCTGCGGGTAAGCTGCTTTTAGTACGAGAGGAACCAAGCAGCGGCGCCACTGGTGTAC
CGGTTGTCTGACAAGGCATAGCCGGGCAGCTACGCGCCAAAGAATAAGAGCTGAATGCAT
CTAAGCTCGAACTCTCACCTAAAAAGAGACCTCATTAAGGATTCCGGTAGAAGACCGGTT
TGATAGAAACGGGATGTAAGCACCAAGGCAACGAGGTGTTCAGTCCGCGTTTACTAACTA
TCCGTTCCTTTCTT
>23s_rRNA_[E:0;score:2908.1]_CP000099_[...]
ATTATGCTATCAGGTGGATGGCTCGGCTCAAGAGCTGATGAAGGACGTGCCAAGCTGCGA
TAAGCCCGGGGTAGGTGCAAGGAGCCTATGAACCCGGGATTTCCGAATGGGACCTCTCCA
TAGTGATCAGTAATGATCGGGAACGCTCCGAATTGAAACATCTCAGTAGGAGCAGGAAAA
GAAATCAACCGAGATACCGTGAGTAACGGCGAGTGAAAACGGCACAGTTCAAACCGAATC
CCTTCACAGGGAAATGTGGTGTTGTAGGGCTGTTCAAACGTCTGGCGGCTAAACAGAACT
TGCCTGAAACGGCAGACCGTAGAGTGTGACAGTCACGTATGTGTAAACCAAAAGACTGGA
ACATGTCCCTGAGTACCGTGCGTTGGATATCGTGCGGGAATCTGGGGGGCACCAACCTCC
AAAACTAAATACTACTTGAGACCGATAGCGAAATAGTAGGGTGACCGAACGCTGAAAAGT
ACCCCGAGAAGGGAGGTGCAAAGTGCCTGAAACCTGATAGTGATGGAACGATACGGCATT
AAAGGAACTCTGGCATGAAGGAAACATTCGCGAGAATGCTGTACGAATGTCACTGCCAGT
GTCGTATCTTACGTTTTGAAGAACGGGCCAGGGAGTTTATCTCAGTGGCAATGGCTAACC
TTTATCTGGGCAGCCGAAGCGAAAGCAACATGTGCGCAGCTCTCCGAGCGAGGCACGACG
TATACAAGTGCGTGGAGTCACTGGGGTAAGACCCGAAGCCGGGTGATCTAGGCGTGGGCA
GGTTGAAGCGTGGCGAAAGCTACGTGGAGGACCGCAAGCGGTATTGATCTGCAAATCATT
CGTGTGACCTGCGTCTCGTAGTGAAATGCTAATCTAACCCGGCATCCGCTGGTTCCTTCC
AAAACATGTCGCAGCATGACCTGACTGGAGATCGTCGGTGGAGTAGAGCACTGATTGGCG
ATTCCGGGGGGGAAACTCCTCGCTCGCCTGTCAAACTCCAAACCCACCGTCATTGTAGAA
AGTCGGAGTCCGGACTGCTGGGGTAAGCTTGTAGTCCGTAAGGGAGACAACCCATCCCGT
GGTTAAGGTCCCCAAGTGTCGACTAAGTGTTAATACTAAAGGGCGTCCCAAGCCCAAGAC
AGCTGGAAGGTTAGCTTAGAAGCAGCTACCCTTTAAAGAGTGCGTAACAGCTCACCAGTC
GAGGTTTGGGGCCCCGAAAATTGACGGGGCTCAAGTCGACCACCGATACCACGGAGTACC
GCAAGGTAATCTCGTAGGAAGGCGTTGCGTTCGGGCCGAAGCAGGGCTGTAAAGTCCTGT
GGACCGTTCGCAAACGAAAATCCTGGTAATAGTAGCAGCAAAGCAGGGTGAGAATCCCTG
CCGCCGAAGGGGCCAGGTTTCCTCGGCAATGATCGTCAGCCGAGGGTTAGTCGGTCCTAA
GACGTACCGTAACTCGAGTACGCCGAAAGGGAAACAGGTTAATATTCCTGTACCATTTAG
CAATCCGTCTGACGTCTCTGGGCAGACCGAGCGGCGTCGTCGCGCCGTCTAAGCAGCGAA
CCCCGTGGAGAGCCGTAATGGCGAGAATCGGGCGAATCTGTTATGGCTAAAGTCGGTTGC
ACCCCGGGACCCGTGAAAAGGCCGCTAAATGTCCGTACCAAGATCTGACACTGGTGCCCC
TAGCTGAAAAGGCTAAGGCGTGTCGGAGTACTTCAGTTAAGGGAATTCGGCAAATTAGCT
CCGTAACTTCGGGATAAGGAGTGCCTGCTGTGGAGACAGCAGGTCGCAGTGACCAGGGGG
CTCTAACTGTCTAATACCAACATAGGAGATTGCAAACCCGTAAGGGCTAGTACAATCTCT
GAATCCTGCTCAGTGCAGGTACCTGAAACCCCGTTTCAACGGGACGAAGGGCCTGTAAAC
AGCGGGGGTAACTATGACCCTCTTAAGGTAGCGTAGTACCTTGTCGCTTAATTGGCGACT
TGCATGAATGGATCAATGAGAGCCCTACTGTCCCTAACTGGAATCCGGTGAAGCTTACAT
TCTAGTGCACAGTCTAGAGACCTCTAGGGGGAAGTGAAGACCCCGTGGAGCTTTACTGCA
GCCTGTCGCTGGGTTGTGGTTCTGGATGTACAGAGTAGGTAGGAGGCATCGAAGCGTATG
CGCCAGCATACGTGGAGCCGCAATTGGGACACTACCCTTCTGGGACTACGACCCTAACTC
TGAGAAGAGGACCCCGATAGGTGGGCAGTTTGCCTGGGGCGGGACGCCCTTGAAAAGATA
TCAAGGGCGCGCAATGGTTGACTCAAGCGGGTCGGAAACTCGCTGAAGAGTGCAAGAGCA
TAAGTCAGCCTGACGTTATTCAGCATAGCAGTGGATGACGAGACGAAAGTCGGCTCTAGC
GAACTTTTGAGCCTCCTTGGTGGGGGCCAAAAATGACAGAAAAGTTACCCCGGGGATAAT
TGAGTCGTTGCCGGCAAGAGTACATATCGACCCGGCAGCTTGCTACCTCGATGTCGGTTC
TTTCCATCCTGGCCGTGCAGCAGCGGCCAAGGGTGAGGTTGTTCGCCTATTAAAGGAGAT
CGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTCGGTTACTATCTACTAGAGGTGCACGA
GGTCTGCGGGTAAGCTGCTTTTAGTACGAGAGGAACCAAGCAGCGGCGCCACTGGTGTAC
CGGTTGTCTGACAAGGCATAGCCGGGCAGCTACGCGCCAAAGAATAAGAGCTGAATGCAT
CTAAGCTCGAACTCTCACCTAAAAAGAGACCTCATTAAGGATTCCGGTAGAAGACCGGTT
TGATAGAAACGGGATGTAAGCACCAAGGCAACGAGGTGTTCAGTCCGCGTTTACTAACTA
TCCGTTCCTTTCTT
>23s_rRNA_[E:0;score:2900.4]_CP000099_[...]
ATTATGCTATCAGGTGGATGGCTCGGCTCAAGAGCTGATGAAGGACGTGCCAAGCTGCGA
TAAGCCCGGGGTAGGTGCAAGGAGCCTATGAACCCGGGATTTCCGAATGGGACCTCTCCA
TAGTGATCAGTAATGATCGGGAACGCTCCGAATTGAAACATCTCAGTAGGAGCAGGAAAA
GAAATCAACCGAGATACCGTGAGTAACGGCGAGTGAAAACGGCACAGTTCAAACCGAATC
CCTTCACAGGGAAATGTGGTGTTGTAGGGCTGTTCAAACGTCTGGCGGCTAAACAGAACT
TGCCTGAAACGGCAGACCGTAGAGTGTGACAGTCACGTATGTGTAAACCAAAAGACTGGA
ACATGTCCCTGAGTACCGTGCGTTGGATATCGTGCGGGAATCTGGGGGGCACCAACCTCC
AAAACTAAATACTACTTGAGACCGATAGCGAAATAGTAGGGTGACCGAACGCTGAAAAGT
ACCCCGAGAAGGGAGGTGCAAAGTGCCTGAAACCTGATAGTGATGGAACGATACGGCATT
AAAGGAACTCTGGCATGAAGGAAACATTCGCGAGAATGCTGTACGAATGTCACTGCCAGT
GTCGTATCTTACGTTTTGAAGAACGGGCCAGGGAGTTTATCTCAGTGGCAATGGCTAACC
TTTATCTGGGCAGCCGAAGCGAAAGCAACATGTGCGCAGCTCTCCGAGCGAGGCACGACG
TATACAAGTGCGTGGAGTCACTGGGGTAAGACCCGAAGCCGGGTGATCTAGGCGTGGGCA
GGTTGAAGCGTGGCGAAAGCTACGTGGAGGACCGCAAGCGGTATTGATCTGCAAATCATT
CGTGTGACCTGCGTCTCGTAGTGAAATGCTAATCTAACCCGGCATCCGCTGGTTCCTTCC
AAAACATGTCGCAGCATGACCTGACTGGAGATCGTCGGTGGAGTAGAGCACTGATTGGCG
ATTCCGGGGGGGAAACTCCTCGCTCGCCTGTCAAACTCCAAACCCACCGTCATTGTAGAA
AGTCGGAGTCCGGACTGCTGGGGTAAGCTTGTAGTCCGTAAGGGAGACAACCCATCCCGT
GGTTAAGGTCCCCAAGTGTCGACTAAGTGTTAATACTAAAGGGCGTCCCAAGCCCAAGAC
AGCTGGAAGGTTAGCTTAGAAGCAGCTACCCTTTAAAGAGTGCGTAACAGCTCACCAGTC
GAGGTTTGGGGCCCCGAAAATTGACGGGGCTCAAGTCGACCACCGATACCACGGAGTACC
GCAAGGTAATCTCGTAGGAAGGCGTTGCGTTCGGGCCGAAGCAGGGCTGTAAAGTCCTGT
GGACCGTTCGCAAACGAAAATCCTGGTAATAGTAGCAGCAAAGCAGGGTGAGAATCCCTG
CCGCCGAAGGGGCCAGGTTTCCTCGGCAATGATCGTCAGCCGAGGGTTAGTCGGTCCTAA
GACGTACCGTAACTCGAGTACGCCGAAAGGGAAACAGGTTAATATTCCTGTACCATTTAG
CAATCCGTCTGACGTCTCTGGGCAGACCGAGCGGCGTCGTCGCGCCGTCTAAGCAGCGAA
CCCCGTGGAGAGCCGTAATGGCGAGAATCGGGCGAATCTGTTATGGCTAAAGTCGGTTGC
ACCCCGGGACCCGTGAAAAGGCCGCTAAATGTCCGTACCAAGATCTGACACTGGTGCCCC
TAGCTGAAAAGGCTAAGGCGTGTCGGAGTACTTCAGTTAAGGGAATTCGGCAAATTAGCT
CCGTAACTTCGGGATAAGGAGTGCCTGCTGTGGAGACAGCAGGTCGCAGTGACCAGGGGG
CTCTAACTGTCTAATACCAACATAGGAGATTGCAAACCCGTAAGGGCTAGTACAATCTCT
GAATCCTGCTCAGTGCAGGTACCTGAAACCCCGTTTCAACGGGACGAAGGGCCTGTAAAC
AGCGGGGGTAACTATGACCCTCTTAAGGTAGCGTAGTACCTTGTCGCTTAATTGGCGACT
TGCATGAATGGATCAATGAGAGCCCTACTGTCCCTAACTGGAATCCGGTGAAGCTTACAT
TCTAGTGCACAGTCTAGAGACCTCTAGGGGGAAGTGAAGACCCCGTGGAGCTTTACTGCA
GCCTGTCGCTGGGTTGTGGTTCTGGATGTACAGAGTAGGTAGGAGGCATCGAAGCGTATG
CGCCAGCATACGTGGAGCCGCAATTGGGACACTACCCTTCTGGGACTACGACCCTAACTC
TGAGAAGAGGACCCCGATAGGTGGGCAGTTTGCCTGGGGCGGGACGCCCTTGAAAAGATA
TCAAGGGCGCGCAATGGTTGACTCAAGTGGGTCGGAAACTCACTGAAGAGTGCAAGAGCA
TAAGTCAGCCTGACGTTATTCAGCATAGCAGTGGATGACGAGACGAAAGTCGGCTCTAGC
GAACTTTTGAGCCTCCTTGGTGGGGGCCAAAAATGACAGAAAAGTTACCCCGGGGATAAT
TGAGTCGTTGCCGGCAAGAGTACATATCGACCCGGCAGCTTGCTACCTCGATGTCGGTTC
TTTCCATCCTGGCCGTGCAGCAGCGGCCAAGGGTGAGGTTGTTCGCCTATTAAAGGAGAT
CGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTCGGTTACTATCTACTAGAGGTGCACGA
GGTCTGCGGGTAAGCTGCTTTTAGTACGAGAGGAACCAAGCAGCGGCGCCACTGGTGTAC
CGGTTGTCTGACAAGGCATAGCCGGGCAGCTACGCGCCAAAGAATAAGAGCTGAATGCAT
CTAAGCTCGAACTCTCACCTAAAAAGAGACCTCATTAAGGATTCCGGTAGAAGACCGGTT
TGATAGAAACGGGATGTAAGCACCAAGGCAACGAGGTGTTCAGTCCGCGTTTACTAACTA
TCCGTTCCTTTCTT







CORRESPONDENCE:



Scientific questions: David W. Ussery      
Peter Fischer Hallin      
    

    

    		
    

    

    

    
This file is last modified  Friday 26th of May 2006 08:40:03 GMT