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CBS >> CBS Prediction Servers >> GenomeAtlas >> Bacteria >> Synechocystis >> species >> rRNA Prediction for Synechocystis species strain PCC6803, Main


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Selection summary: 17 segments, 17 strains, 10 species, 7 genera  Close the kingdom view of Bacteria and return to index
Available tables
Synechocystis species PCC6803 Main Close the view of this segment and return to your kingdom search
Atlases of DNA properties
DNA Analysis related to Segment Table
 

Predicted TSU ribosomal RNA for Synechocystis species strain PCC6803, Main

Get sequences as a FASTA file

Bacteria/Synechocystis/species/PCC6803/Main/Sspecies_PCC6803_Main.rnammer.tsu.fsa
>5s_rRNA_[E:2.1e-18;score:58.7]_BA000022_[...]
TGGTGTCTTTAGCGTCATGGAACCACTCCGATCCCATCCCGCACTCGGTTGTGAAATGTG
ACAGCGGCGACGATACTCTGGGGGTTGCCCCACGGCACAATAGTCCGATGCCAAGTT
>5s_rRNA_[E:2.1e-18;score:58.7]_BA000022_[...]
TGGTGTCTTTAGCGTCATGGAACCACTCCGATCCCATCCCGCACTCGGTTGTGAAATGTG
ACAGCGGCGACGATACTCTGGGGGTTGCCCCACGGCACAATAGTCCGATGCCAAGTT

Predicted SSU ribosomal RNA for Synechocystis species strain PCC6803, Main
Get sequences as a FASTA file

Bacteria/Synechocystis/species/PCC6803/Main/Sspecies_PCC6803_Main.rnammer.ssu.fsa
>16s_rRNA_[E:0;score:1856.3]_BA000022_[...]
AGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGTATGCCTAACACATGCAAGTCGAAC
GGAGTTCTTCGGAACTTAGTGGCGGACGGGTGAGTAACACGTGAGAACCTACCTTCAGAA
TGGGGACAACAGTTGGAAACGACTGCTAATACCCAATGTGCCGAAAGGTGAAAGATTTAT
CGTCTGAAGATGGGCTCGCGTCTGATTAGCTAGATGGTGGGGTAAGAGCCTACCATGGCA
ACGATCAGTAGCTGGTCTGAGAGGATGAGCAGCCACACTGGGACTGAGACACGGCCCAGA
CTCCTACGGGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAAT
ACCGCGTGAGGGAGGAAGGTCCTTGGATTGTAAACCTCTTTTATCAGGGAAGAAGTTCTG
ACGGTACCTGATGAATAAGCATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGG
ATGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGTCCGTAGGTGGTTATGCAAGTCTG
CCGTTAAAGAATGGAGCTTAACTCCATAGGAGCGGTGGAAACTGCAAGACTAGAGTACAG
TAGGGGTAGCAGGAATTCCCAGTGTAGCGGTGAAATGCGTAGATATTGGGAAGAACATCG
GTGGCGAAAGCGTGCTACTGGGCTGAAACTGACACTGAGGGACGAAAGCTAGGGTAGCGA
AAGGGATTAGATACCCCTGTAGTCCTAGCCGTAAACGATGGATACTAGGCGTGGCTTGTA
TCGACCCGAGCCGTGCCGAAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTACGCACGCA
AGTGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGTATGTGGTTTAAT
TCGATGCAACGCGAAGAACCTTACCAAGGCTTGACATCCCTGGAATCCTGCGGAAACGTG
GGAGTGCCTTAGGGAGCCAGGAGACAGGTGGTGCATGGCTGTCGTCAGCTCGTGTCGTGA
GATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTTTTTAGTTGCCATCATTAAGTT
GGGCACTCTAGAGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCA
TCATGCCCCTTACGCCTTGGGCTACACACGTACTACAATGGTCGGGACAACGGGCAGCGA
GCTCGCGAGAGTAAGCGAATCCCATCAAACCCGGCCTCAGTTCAGATTGCAGGCTGCAAC
TCGCCTGCATGAAGGAGGAATCGCTAGTAATCGCAGGTCAGAATACTGCGGTGAATTCGT
TCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGCTGGTCACGCCCGAAGTCGTT
ACTCTAACCTTAGGGAGGAGGGCGCCGAAGGCAGGGCTAGTGACTGGGGTGAAGTCGTAA
CAAGGTAGCCGTACCGGAAGGTGTGGCTGGATCACCT
>16s_rRNA_[E:0;score:1856.3]_BA000022_[...]
AGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGTATGCCTAACACATGCAAGTCGAAC
GGAGTTCTTCGGAACTTAGTGGCGGACGGGTGAGTAACACGTGAGAACCTACCTTCAGAA
TGGGGACAACAGTTGGAAACGACTGCTAATACCCAATGTGCCGAAAGGTGAAAGATTTAT
CGTCTGAAGATGGGCTCGCGTCTGATTAGCTAGATGGTGGGGTAAGAGCCTACCATGGCA
ACGATCAGTAGCTGGTCTGAGAGGATGAGCAGCCACACTGGGACTGAGACACGGCCCAGA
CTCCTACGGGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAAT
ACCGCGTGAGGGAGGAAGGTCCTTGGATTGTAAACCTCTTTTATCAGGGAAGAAGTTCTG
ACGGTACCTGATGAATAAGCATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGG
ATGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGTCCGTAGGTGGTTATGCAAGTCTG
CCGTTAAAGAATGGAGCTTAACTCCATAGGAGCGGTGGAAACTGCAAGACTAGAGTACAG
TAGGGGTAGCAGGAATTCCCAGTGTAGCGGTGAAATGCGTAGATATTGGGAAGAACATCG
GTGGCGAAAGCGTGCTACTGGGCTGAAACTGACACTGAGGGACGAAAGCTAGGGTAGCGA
AAGGGATTAGATACCCCTGTAGTCCTAGCCGTAAACGATGGATACTAGGCGTGGCTTGTA
TCGACCCGAGCCGTGCCGAAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTACGCACGCA
AGTGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGTATGTGGTTTAAT
TCGATGCAACGCGAAGAACCTTACCAAGGCTTGACATCCCTGGAATCCTGCGGAAACGTG
GGAGTGCCTTAGGGAGCCAGGAGACAGGTGGTGCATGGCTGTCGTCAGCTCGTGTCGTGA
GATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTTTTTAGTTGCCATCATTAAGTT
GGGCACTCTAGAGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCA
TCATGCCCCTTACGCCTTGGGCTACACACGTACTACAATGGTCGGGACAACGGGCAGCGA
GCTCGCGAGAGTAAGCGAATCCCATCAAACCCGGCCTCAGTTCAGATTGCAGGCTGCAAC
TCGCCTGCATGAAGGAGGAATCGCTAGTAATCGCAGGTCAGAATACTGCGGTGAATTCGT
TCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGCTGGTCACGCCCGAAGTCGTT
ACTCTAACCTTAGGGAGGAGGGCGCCGAAGGCAGGGCTAGTGACTGGGGTGAAGTCGTAA
CAAGGTAGCCGTACCGGAAGGTGTGGCTGGATCACCT

Predicted LSU ribosomal RNA for Synechocystis species strain PCC6803, Main
Get sequences as a FASTA file

Bacteria/Synechocystis/species/PCC6803/Main/Sspecies_PCC6803_Main.rnammer.lsu.fsa
>23s_rRNA_[E:0;score:2898.0]_BA000022_[...]
TCAAGCTACAAAGGGCTAACGGTGGATACCTTGGCACACAGAGGCGAAGAAGGACGTGGT
TACCGACGAAACGCTTCGGGGAGCTGGAAACAAGCATTGATCCGGAGGTGTCCGAATGGG
GCAACCCAAGTGAACTACCCGCTGAATAAAATAGGCGGGAGAGAGCAAACCTAGTGAACT
GAAACATCTTAGTAGCTAGAGGAAAAGAAAACAAAAGTGATTCTCCAAGTAGCGGCGAGC
GAACGGGGAACAGCCTAAACCAATCTTTTCGAAGATTGGGGTCGTGGGACAGCAACGTGG
ACTGAGTAGATTAGACGAAGCAGCTGAAAACTGCACCAGAGGAGGTGAAAGTCCTGTAGT
CGAAAATTGAATCAGCCTAGCTGTATCCCGAGTAGGTCGGAGCTCGTGGAATTCCGATTG
AATCAGCCGGGACCACCCGGTAAGGCTAAATACTACTGTGTGACCGATAGCGTAAAGTAC
CGCGAGGGAAAGGTGAAAAGAACCCCGTTGAGGGGAGTGAAATAGAACATGAAACCGTTA
GCCTACAAGCAATGGGAGCTCGATTAAACGAGTGACCGTGTGCCTGTTGAAGAATGAGCC
GGCGACTTACAGGTTGTGGCAGGTTAAGGTGTGTTGCACCGAAGCCAAAGTGAAAGCGAG
CCTGAATAGGGCGTTAGTCACAATTTGTAGACCCGAACCCGGGTGATCTAACCATGGCCA
GGATGAAGCTTAGGTAACACTAAGTGGAGGTCCGAACCGACTAATGTTGAAAAATTAGCG
GATGAGCTGTGGTTAGGGGTGAAATGCCAATCGAACCCGGAGCTAGCTGGTTCTCCCCGA
AATGTGTTTAGGCGCAGCGGTTGTAAAGTCAACTTGGGGGGTAAAGCACTGTTTCGCTGC
GGGCGGCGAGAGCTGTACCAAAGTGAGGCAAACTCAGAATACCCAAGAAGAAACGACCAG
TAAGACGGTGGGGGATAAGCTTCATCGTCGAAAGGGAAACAGCCCAGACCACCAGCTAAG
GTCCCCAAATCATCACTAAGTGAGAAAGGAGGTGGGAGTGCATTGACAACCAGGAGGTTT
GCCTAGAAGCAGCAATCCTTAAAAGAGTGCGTAATAGCTCACTGGTCAAGCGCTCCTGCG
CCGAAAATGAACGGGGCTAAGTGATGTACCGAAGCTGTGGACTCAGATATGAGTGGTAGG
GGAGCGTTCTGTATAGGGTGAAGCACTAGCGGCAAGCAGGTGTGGACAGTACAGAAGTGA
GAATGTCGGCTTGAGTAGCGAAAATATGGGTGAGAATCCCATACCCCGAAATCCTAAGGG
TTCCTCCGGAAGGCTCGTCCGCGGAGGGTTAGTCAGGACCTAAGGCGAGGCCGAGAGGCG
TAGTCGATGGACAACCGGTCAATATTCCGGTACTGATTATAGATTGTGGCGGGGGACGGA
GAAGGCTAGTGCAACTGGAAGTTGGTTACCAGTCCAAGCATTCGAGGCGATGAGAGACGG
CGAAAACGTCTTGAGCAGAGGTGTGATGGGGAGTCTCTACGGAGACGAAGTGCATGATGT
CAAGCTTCCAAGAAAAGCCCGAACCACGTTAATTTATAGTCACCTGTACCCGAAACCGAC
ACAGGTAGGAAGGTAGAGAATACTAAGGGGCGCGAGGTAACTCTCTCTAAGGAACTCGGC
AAAATTACCCCGTAACTTCGGGAGAAGGGGTGCCTCCAGCAATGGAGGTCGCAGTGAATA
GGCCCAGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGTAAGACGCAGTATGG
GGGCTGACGCCTGCCCAGTGCCGGAAGGTTAAGGAAGTTGGTCAGGGAGTAATCCTGAAG
CTAGCGACTGAAGCCCCGGTGAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAA
TTCCTTGTCGGGTAAGTTCCGACCCGCACGAAAGGCGTAACGATCTGGGCACTGTCTCGG
AGAGAGGCTCGGCGAAATAGGATTGTCTGTGAAGATACGGACTCCCTGCACCTGGACAGA
AAGACCCTATGAAGCTTTACTGTAGCTTGGAATTGGGTTCGGGCTTTGCTTGCGCAGGAT
AGGTGGGAGACTATGAAGTTGCTCTTGTGGGAGTAATGGAGTCAACGGTGAGATACCACT
CTGGTGAGGCTAGAATTCTAACTTGTTCCCGTTATCCGGGAGAAGGACAATTTCAGGTGG
GCAGTTTGACTGGGGCGGTCGCCTCCTAAAAGGTAACGGAGGCGCGCAAAGGTTTCCTCA
GGCTGGTTGGAAATCAGCCGAAGAGTGTAAAAGCAGAAGGAAGCTTGACTGTGAGACTGA
CAAGTCAAACAGGGACGAAAGTCGGCTTTAGTGATCCGACGGCACTGAGTGGAAGGGCCG
TCGCTCAACGGATAAAAGTTACTCTAGGGATAACAGGCTGATCTCCGCCAAGAGTTCACA
TCGACGCGGAGGTTTGGCACCTCGATGTCGGCTCATCGCAACCTGGGGCGGTAGTACGTC
CCAAGGGTTGGGCTGTTCGCCCATTAAAGCGGTACGTGAGCTGGGTTCAGAACGTCGTGA
GACAGTTCGGTCCATATCCGGTGTAGGCGTAAGAGTATTGAGAGGAGACTTCCTTAGTAC
GAGAGGACCGGGAAGTACGCACCTCTGGTGTACCTGTTATCGTGCCAACGGTAAACGCAG
GGTAGCCAAGTGCGGAGTGGATAACCGCTGAAAGCATCTAAGTGGGAAGCCCACCTCAAG
ATGAGTACTCTCATGGTGTTAAGCCAGTAAGGTCACGGGAAGACTACCCGTTGATAGGCT
CTAGATGGAAGTCCAGTAATGGATGAAGTCGAGGAGTACTAATAGACCGAGGGCTTGACC
TT
>23s_rRNA_[E:0;score:2898.0]_BA000022_[...]
TCAAGCTACAAAGGGCTAACGGTGGATACCTTGGCACACAGAGGCGAAGAAGGACGTGGT
TACCGACGAAACGCTTCGGGGAGCTGGAAACAAGCATTGATCCGGAGGTGTCCGAATGGG
GCAACCCAAGTGAACTACCCGCTGAATAAAATAGGCGGGAGAGAGCAAACCTAGTGAACT
GAAACATCTTAGTAGCTAGAGGAAAAGAAAACAAAAGTGATTCTCCAAGTAGCGGCGAGC
GAACGGGGAACAGCCTAAACCAATCTTTTCGAAGATTGGGGTCGTGGGACAGCAACGTGG
ACTGAGTAGATTAGACGAAGCAGCTGAAAACTGCACCAGAGGAGGTGAAAGTCCTGTAGT
CGAAAATTGAATCAGCCTAGCTGTATCCCGAGTAGGTCGGAGCTCGTGGAATTCCGATTG
AATCAGCCGGGACCACCCGGTAAGGCTAAATACTACTGTGTGACCGATAGCGTAAAGTAC
CGCGAGGGAAAGGTGAAAAGAACCCCGTTGAGGGGAGTGAAATAGAACATGAAACCGTTA
GCCTACAAGCAATGGGAGCTCGATTAAACGAGTGACCGTGTGCCTGTTGAAGAATGAGCC
GGCGACTTACAGGTTGTGGCAGGTTAAGGTGTGTTGCACCGAAGCCAAAGTGAAAGCGAG
CCTGAATAGGGCGTTAGTCACAATTTGTAGACCCGAACCCGGGTGATCTAACCATGGCCA
GGATGAAGCTTAGGTAACACTAAGTGGAGGTCCGAACCGACTAATGTTGAAAAATTAGCG
GATGAGCTGTGGTTAGGGGTGAAATGCCAATCGAACCCGGAGCTAGCTGGTTCTCCCCGA
AATGTGTTTAGGCGCAGCGGTTGTAAAGTCAACTTGGGGGGTAAAGCACTGTTTCGCTGC
GGGCGGCGAGAGCTGTACCAAAGTGAGGCAAACTCAGAATACCCAAGAAGAAACGACCAG
TAAGACGGTGGGGGATAAGCTTCATCGTCGAAAGGGAAACAGCCCAGACCACCAGCTAAG
GTCCCCAAATCATCACTAAGTGAGAAAGGAGGTGGGAGTGCATTGACAACCAGGAGGTTT
GCCTAGAAGCAGCAATCCTTAAAAGAGTGCGTAATAGCTCACTGGTCAAGCGCTCCTGCG
CCGAAAATGAACGGGGCTAAGTGATGTACCGAAGCTGTGGACTCAGATATGAGTGGTAGG
GGAGCGTTCTGTATAGGGTGAAGCACTAGCGGCAAGCAGGTGTGGACAGTACAGAAGTGA
GAATGTCGGCTTGAGTAGCGAAAATATGGGTGAGAATCCCATACCCCGAAATCCTAAGGG
TTCCTCCGGAAGGCTCGTCCGCGGAGGGTTAGTCAGGACCTAAGGCGAGGCCGAGAGGCG
TAGTCGATGGACAACCGGTCAATATTCCGGTACTGATTATAGATTGTGGCGGGGGACGGA
GAAGGCTAGTGCAACTGGAAGTTGGTTACCAGTCCAAGCATTCGAGGCGATGAGAGACGG
CGAAAACGTCTTGAGCAGAGGTGTGATGGGGAGTCTCTACGGAGACGAAGTGCATGATGT
CAAGCTTCCAAGAAAAGCCCGAACCACGTTAATTTATAGTCACCTGTACCCGAAACCGAC
ACAGGTAGGAAGGTAGAGAATACTAAGGGGCGCGAGGTAACTCTCTCTAAGGAACTCGGC
AAAATTACCCCGTAACTTCGGGAGAAGGGGTGCCTCCAGCAATGGAGGTCGCAGTGAATA
GGCCCAGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGTAAGACGCAGTATGG
GGGCTGACGCCTGCCCAGTGCCGGAAGGTTAAGGAAGTTGGTCAGGGAGTAATCCTGAAG
CTAGCGACTGAAGCCCCGGTGAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAA
TTCCTTGTCGGGTAAGTTCCGACCCGCACGAAAGGCGTAACGATCTGGGCACTGTCTCGG
AGAGAGGCTCGGCGAAATAGGATTGTCTGTGAAGATACGGACTCCCTGCACCTGGACAGA
AAGACCCTATGAAGCTTTACTGTAGCTTGGAATTGGGTTCGGGCTTTGCTTGCGCAGGAT
AGGTGGGAGACTATGAAGTTGCTCTTGTGGGAGTAATGGAGTCAACGGTGAGATACCACT
CTGGTGAGGCTAGAATTCTAACTTGTTCCCGTTATCCGGGAGAAGGACAATTTCAGGTGG
GCAGTTTGACTGGGGCGGTCGCCTCCTAAAAGGTAACGGAGGCGCGCAAAGGTTTCCTCA
GGCTGGTTGGAAATCAGCCGAAGAGTGTAAAAGCAGAAGGAAGCTTGACTGTGAGACTGA
CAAGTCAAACAGGGACGAAAGTCGGCTTTAGTGATCCGACGGCACTGAGTGGAAGGGCCG
TCGCTCAACGGATAAAAGTTACTCTAGGGATAACAGGCTGATCTCCGCCAAGAGTTCACA
TCGACGCGGAGGTTTGGCACCTCGATGTCGGCTCATCGCAACCTGGGGCGGTAGTACGTC
CCAAGGGTTGGGCTGTTCGCCCATTAAAGCGGTACGTGAGCTGGGTTCAGAACGTCGTGA
GACAGTTCGGTCCATATCCGGTGTAGGCGTAAGAGTATTGAGAGGAGACTTCCTTAGTAC
GAGAGGACCGGGAAGTACGCACCTCTGGTGTACCTGTTATCGTGCCAACGGTAAACGCAG
GGTAGCCAAGTGCGGAGTGGATAACCGCTGAAAGCATCTAAGTGGGAAGCCCACCTCAAG
ATGAGTACTCTCATGGTGTTAAGCCAGTAAGGTCACGGGAAGACTACCCGTTGATAGGCT
CTAGATGGAAGTCCAGTAATGGATGAAGTCGAGGAGTACTAATAGACCGAGGGCTTGACC
TT







CORRESPONDENCE:



Scientific questions: David W. Ussery      
Peter Fischer Hallin      
    

    

    		
    

    

    

    
This file is last modified  Friday 26th of May 2006 08:40:03 GMT