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Selection summary: 28 segments, 27 strains, 27 species, 20 genera

Available tables

Pyrococcus horikoshii OT3 Main

Atlases of DNA properties
All other DNA Analysis

TAXONOMY phylum : "Euryarchaeota" Woese et al. 1990 (authority) class : Protoarchaea (synonym) order : Thermococcales (scientific name) family : Thermococcaceae (scientific name) genus : Pyrococcus (scientific name) species : 'Pyrococcus shinkaii' (synonym) no rank : Pyrococcus horikoshii OT-3 (equivalent name)

Organism Click to show all segments of the species Sub-strain Segment(id) Links %AT Size(bp) Periodicity Predicted Origin Number of genes tRNA count rRNA count Coding density Atlas Promoter analysis Reference P. horikoshii Strain: OT3 Main cir CBS Download NCBI Entrez 58.1% 1,738,505 bp 111 kbp 2,061 genes 47 Codon Usage 5s 2 16s 1 23s 1 90.7% 844 bp/gene Genome (cir) Structure (cir) Repeat (cir) Base (cir) Cruciform (cir) Z-DNA (cir) A-DNA (cir) Show all atlases Promoter DNA Res. 1998 Apr 30,  5(2):55-76 1998 Apr 30 [Abstract] | [PubMed] | [NCBI Entrez]

REFERENCES

• Peter F. Hallin and David Ussery (2004). CBS Genome Atlas Database: A dynamic storage for bioinformatic results and sequence data Bioinformatics 20:3682-3686 PDF | Pubmed

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