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Classification of phyla is from NCBI page
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132 projects found  

1 accessions found for Caulobacter crescentus CB15  

Data for AE005673  

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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: AE005673.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
AE005673_2465 CDS_2690687-2693215 95.8 7.6e-27 1
AE005673_2649 CDS_2888863-2886791 94.7 1.5e-26 2
AE005673_2828 CDS_3080668-3078707 94.7 1.6e-26 1
AE005673_3049 CDS_3305893-3303341 92.2 7.8e-26 1
AE005673_3076 CDS_3335606-3333924 91.6 1.2e-25 1
AE005673_1059 CDS_1194522-1196315 90.9 1.8e-25 1
AE005673_0930 CDS_1037957-1036140 88.1 1.2e-24 1
AE005673_2484 CDS_2712271-2710358 87.6 1.6e-24 1
AE005673_2611 CDS_2849216-2851297 87.4 1.9e-24 1
AE005673_3165 CDS_3438583-3440511 86.1 4.2e-24 1
AE005673_0917 CDS_1019851-1018091 85.6 5.9e-24 1
AE005673_0720 CDS_794555-792780 85.0 9e-24 1
AE005673_2945 CDS_3193489-3191348 84.3 1.4e-23 1
AE005673_2962 CDS_3207067-3205343 81.8 7.3e-23 1
AE005673_0649 CDS_719275-721605 81.3 9.6e-23 1
AE005673_1058 CDS_1194361-1193570 81.1 1.1e-22 1
AE005673_0288 CDS_304469-305884 80.8 1.4e-22 1
AE005673_0584 CDS_640971-643121 77.8 9.5e-22 1
AE005673_2967 CDS_3210923-3212797 76.7 2e-21 1
AE005673_0137 CDS_148530-146986 76.3 2.6e-21 1
AE005673_1287 CDS_1439555-1437981 75.3 4.8e-21 1
AE005673_3193 CDS_3480606-3482579 75.2 5.4e-21 1
AE005673_0026 CDS_29403-26701 73.6 1.5e-20 2
AE005673_3458 CDS_3724305-3726614 68.6 3.9e-19 1
AE005673_2504 CDS_2727783-2725264 67.0 1.1e-18 1
AE005673_1585 CDS_1761080-1763758 67.0 1.1e-18 1
AE005673_3597 CDS_3881428-3883215 66.1 2e-18 1
AE005673_0237 CDS_253207-254811 62.6 1.9e-17 1
AE005673_1693 CDS_1877441-1879123 58.4 3.1e-16 1
AE005673_1730 CDS_1915429-1917579 49.9 8e-14 1
AE005673_1728 CDS_1912762-1913853 48.5 1.9e-13 1
AE005673_2860 CDS_3106899-3108377 46.2 8.5e-13 1
AE005673_0756 CDS_835064-833550 43.5 5e-12 1
AE005673_2850 CDS_3096815-3099199 43.0 7.2e-12 1
AE005673_2906 CDS_3155664-3157001 42.1 1.3e-11 1
AE005673_3199 CDS_3488475-3486280 36.7 4.2e-10 1
AE005673_2307 CDS_2526037-2527830 34.6 1.7e-09 1
AE005673_0247 CDS_260914-259514 34.5 1.8e-09 1
AE005673_1074 CDS_1209761-1211836 31.6 1.2e-08 1
AE005673_1177 CDS_1339928-1338501 29.9 3.5e-08 1
AE005673_0529 CDS_552437-553942 27.6 1.6e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
AE005673_2465 1/1 600 669 .. 1 87 [] 95.8 7.6e-27
AE005673_2828 1/1 276 341 .. 1 87 [] 94.7 1.6e-26
AE005673_2649 1/2 320 385 .. 1 87 [] 93.7 3e-26
AE005673_3049 1/1 464 529 .. 1 87 [] 92.2 7.8e-26
AE005673_3076 1/1 185 250 .. 1 87 [] 91.6 1.2e-25
AE005673_1059 1/1 328 396 .. 1 87 [] 90.9 1.8e-25
AE005673_0930 1/1 222 287 .. 1 87 [] 88.1 1.2e-24
AE005673_2484 1/1 265 331 .. 1 87 [] 87.6 1.6e-24
AE005673_2611 1/1 319 385 .. 1 87 [] 87.4 1.9e-24
AE005673_3165 1/1 265 330 .. 1 87 [] 86.1 4.2e-24
AE005673_0917 1/1 208 273 .. 1 87 [] 85.6 5.9e-24
AE005673_0720 1/1 225 290 .. 1 87 [] 85.0 9e-24
AE005673_2945 1/1 340 405 .. 1 87 [] 84.3 1.4e-23
AE005673_2962 1/1 198 263 .. 1 87 [] 81.8 7.3e-23
AE005673_0649 1/1 410 476 .. 1 87 [] 81.3 9.6e-23
AE005673_1058 1/1 37 106 .. 1 87 [] 81.1 1.1e-22
AE005673_0288 1/1 201 268 .. 1 87 [] 80.8 1.4e-22
AE005673_0584 1/1 351 417 .. 1 87 [] 77.8 9.5e-22
AE005673_2967 1/1 249 314 .. 1 87 [] 76.7 2e-21
AE005673_0137 1/1 16 78 .. 4 87 .] 76.3 2.6e-21
AE005673_1287 1/1 289 355 .. 1 87 [] 75.3 4.8e-21
AE005673_3193 1/1 276 341 .. 1 87 [] 75.2 5.4e-21
AE005673_0026 1/2 527 592 .. 1 87 [] 71.9 4.7e-20
AE005673_3458 1/1 540 606 .. 1 87 [] 68.6 3.9e-19
AE005673_2504 1/1 475 540 .. 1 87 [] 67.0 1.1e-18
AE005673_1585 1/1 660 728 .. 1 87 [] 67.0 1.1e-18
AE005673_3597 1/1 216 281 .. 1 87 [] 66.1 2e-18
AE005673_0237 1/1 299 364 .. 1 87 [] 62.6 1.9e-17
AE005673_1693 1/1 203 260 .. 1 87 [] 58.4 3.1e-16
AE005673_1730 1/1 475 546 .. 1 87 [] 49.9 8e-14
AE005673_1728 1/1 126 190 .. 1 87 [] 48.5 1.9e-13
AE005673_2860 1/1 251 317 .. 1 87 [] 46.2 8.5e-13
AE005673_0756 1/1 269 340 .. 1 87 [] 43.5 5e-12
AE005673_2850 1/1 431 497 .. 1 87 [] 43.0 7.2e-12
AE005673_2906 1/1 241 299 .. 1 87 [] 42.1 1.3e-11
AE005673_3199 1/1 359 427 .. 1 87 [] 36.7 4.2e-10
AE005673_2307 1/1 217 283 .. 1 87 [] 34.6 1.7e-09
AE005673_0247 1/1 238 301 .. 1 87 [] 34.5 1.8e-09
AE005673_1074 1/1 312 378 .. 1 87 [] 31.6 1.2e-08
AE005673_1177 1/1 272 329 .. 1 87 [] 29.9 3.5e-08
AE005673_0529 1/1 263 327 .. 1 87 [] 27.6 1.6e-07

Alignments of top-scoring domains:
AE005673_2465: domain 1 of 1, from 600 to 669: score 95.8, E = 7.6e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHELRTPL+aI g++e++ +e++ ++l+++
AE005673_2 600 AKSEFLANMSHELRTPLNAINGFSEIMMNEMF------GPLGDQR-- 638

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+ y + i++++++ll+Lind+Ld+s+ieag
AE005673_2 639 ---------YKGYSQDIHSSGQHLLALINDILDMSKIEAG 669

AE005673_2828: domain 1 of 1, from 276 to 341: score 94.7, E = 1.6e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHE+RTPL++++g+ae+L + t+l++ q
AE005673_2 276 AKSEFLANMSHEIRTPLNGVIGMAEVLSR---------TALDDAQ-- 311

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+ e+il++++ l+ L++d+Ldls+ieag
AE005673_2 312 ----------REMMEVILNSGRALNLLLSDILDLSKIEAG 341

AE005673_2649: domain 1 of 2, from 320 to 385: score 93.7, E = 3e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++flan+sHE+RTPL++++++a +L e t+l+++q
AE005673_2 320 AKNDFLANMSHEIRTPLNGVIALAAALDE---------TPLTSKQ-- 355

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e++ i+r++e l+rL++d+Ld s+ieag
AE005673_2 356 ----------AEMVAMIRRSGETLERLVSDILDVSKIEAG 385

AE005673_3049: domain 1 of 1, from 464 to 529: score 92.2, E = 7.8e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla +sHELRTPL++++g+a++L+ + l++ q
AE005673_3 464 AKSAFLAVMSHELRTPLNGMLGLAQALRS---------DQLTPAQ-- 499

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re ++ il++++ ll L+nd+Ldls+ieag
AE005673_3 500 ----------REQVDLILDSGDTLLVLLNDILDLSKIEAG 529

AE005673_3076: domain 1 of 1, from 185 to 250: score 91.6, E = 1.2e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla++sHELRTP+++++g+a++L+ t+l+++q
AE005673_3 185 AKSAFLAMMSHELRTPMNGVLGLAHALRG---------TKLDAQQ-- 220

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
eyle i+++++ l ++nd+Ldls+ieag
AE005673_3 221 ----------SEYLEMIEQSGHGLMTILNDILDLSKIEAG 250

AE005673_1059: domain 1 of 1, from 328 to 396: score 90.9, E = 1.8e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +flan+sHELRTPL+aI+g++++++++++ ++ls+
AE005673_1 328 GRARFLANMSHELRTPLNAIMGFSDIMRARMF------GPLSDRY-- 366

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ey e i++++ +ll+Lind+Ld+s+iea+
AE005673_1 367 ----------AEYAELIHESGGHLLDLINDVLDMSKIEAE 396

AE005673_0930: domain 1 of 1, from 222 to 287: score 88.1, E = 1.2e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aksefla++sHE+RTPL++++g+a+++ ++l +q
AE005673_0 222 AKSEFLATMSHEIRTPLNGVLGMAQIMAS---------GKLQVDQ-- 257

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ leti ++++ll Lin +Ld srie g
AE005673_0 258 ----------RRRLETITASGQSLLGLINTILDVSRIEDG 287

AE005673_2484: domain 1 of 1, from 265 to 331: score 87.6, E = 1.6e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+flan+ HELRTPLtaI+g+ae+L++ + +l+
AE005673_2 265 AKSDFLANMTHELRTPLTAIIGFAEVLRR--------SRNLNKTA-- 301

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + il++++ ll+ +nd+Ld+sr+eag
AE005673_2 302 ----------ARQVGHILDASNTLLSVVNDVLDFSRLEAG 331

AE005673_2611: domain 1 of 1, from 319 to 385: score 87.4, E = 1.9e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+efla++sHE+RTPL++++g+a+lL + +++l+++
AE005673_2 319 AKTEFLATMSHEIRTPLNSVLGFAQLLAA--------REDLPPDA-- 355

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ ++ i++++ ll ++d+Ld+sr eag
AE005673_2 356 ----------RRQVNLIDSAGAALLTVVDDILDFSRVEAG 385

AE005673_3165: domain 1 of 1, from 265 to 330: score 86.1, E = 4.2e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+flan+sHE+RTP+++++g ++lL++ ++ls++
AE005673_3 265 TKSQFLANMSHEIRTPMNGVLGVLHLLKT---------EKLSDDG-- 300

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l +l+++e l++L+nd+ d+s+ieag
AE005673_3 301 ----------RRLLTEALSCGEMLSALLNDIIDFSKIEAG 330

AE005673_0917: domain 1 of 1, from 208 to 273: score 85.6, E = 5.9e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks f+a sHELRTP+++++g+a++L++ ++l++ q
AE005673_0 208 AKSTFIAVTSHELRTPMNGLLGMAHALQR---------STLDPVQ-- 243

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re + +++++++l +L+nd+Ldlsr e+g
AE005673_0 244 ----------REQIALMIKSGDSLMQLLNDVLDLSRVETG 273

AE005673_0720: domain 1 of 1, from 225 to 290: score 85.0, E = 9e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aksefla +sHELRTPL++++g++++L+ ++l + +
AE005673_0 225 AKSEFLALMSHELRTPLNGMLGLSQALKL---------EPLEPGE-- 260

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re +e ++++++ ll+L+nd+Ld+++ieag
AE005673_0 261 ----------REQVELLEESGRTLLALLNDVLDMAKIEAG 290

AE005673_2945: domain 1 of 1, from 340 to 405: score 84.3, E = 1.4e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+f+an+sHE+RTPL++++++a++L+ ++l++ q
AE005673_2 340 VKSQFVANVSHEIRTPLNGVIALASALRQ---------SALTDRQ-- 375

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re++e+i +++ l+++++ lLdl++iea+
AE005673_2 376 ----------REMVEIIVESGTTLESILSALLDLAKIEAE 405

AE005673_2962: domain 1 of 1, from 198 to 263: score 81.8, E = 7.3e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla++sHE+RTP++++++++++L + ++l+++q
AE005673_2 198 AKSAFLAMISHEIRTPMNGVLAMTDALSR---------ADLGPDQ-- 233

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + ++r++e l L+nd+Ld+srieag
AE005673_2 234 ----------ARQTALLKRSGEDLMTLLNDVLDISRIEAG 263

AE005673_0649: domain 1 of 1, from 410 to 476: score 81.3, E = 9.6e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+s flan+sHELRTPLta++g+a l + ++l+e
AE005673_0 410 ARSAFLANMSHELRTPLTAVIGFAALVEG--------LDDLPETA-- 446

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+y+ +i +++ ll+ ind+L++s++e+g
AE005673_0 447 ----------RDYVGRISTAGKALLSVINDVLEMSKLETG 476

AE005673_1058: domain 1 of 1, from 37 to 106: score 81.1, E = 1.1e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+ fl+++sHELRTPL+a++g++e+L el+ ++l+++q
AE005673_1 37 RKRSFLRMVSHELRTPLNAVIGFSEILSQELY------GPLGSPQ-- 75

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yrey ++++++ ll+L+n++ +l+r+e +
AE005673_1 76 ---------YREYATIVHDSGLKLLKLVNQIVELARLEGQ 106

AE005673_0288: domain 1 of 1, from 201 to 268: score 80.8, E = 1.4e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +flan+sHELRTPL++++g++e+L+ ++++++ ++
AE005673_0 201 TRADFLANASHELRTPLASLSGFIETLRG---------HAKDDPGAR 238

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l ++l +aer++rLi+dl+ lsrie +
AE005673_0 239 ----------DKFLAIMLAQAERMSRLIDDLMSLSRIELN 268

AE005673_0584: domain 1 of 1, from 351 to 417: score 77.8, E = 9.5e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks flan+ HELRTPLt+++g+ae +++ +++ls+
AE005673_0 351 AKSAFLANMTHELRTPLTSVIGFAEQIQA--------EPALSPTV-- 387

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r + ++i ++ ll+ ind+Ld+s++e+g
AE005673_0 388 ----------RHASDRISAGGRALLSTINDILDFSKLESG 417

AE005673_2967: domain 1 of 1, from 249 to 314: score 76.7, E = 2e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ +la +sHE RTPL+a++g+ae+L + ++l++ q
AE005673_2 249 AKTHLLAVASHEVRTPLNAVLGLAEVLAR---------SPLDATQ-- 284

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re ++ +++++ llrL++ +Ld++rie+g
AE005673_2 285 ----------REHVDGVRQAGGMLLRLLSSVLDFARIESG 314

AE005673_0137: domain 1 of 1, from 16 to 78: score 76.3, E = 2.6e-21
*->eflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrlpeL
e la+lsHE+RTPL++++g+a lL++ t+l++eq
AE005673_0 16 EQLATLSHEFRTPLNGVLGMARLLEN---------TKLTAEQ----- 48

RledpeyreyletilreaerllrLindlLdlsrieag<-*
r y+ +++++++ll+L+nd+L ++r++a
AE005673_0 49 -------RSYVTALRESGDHLLSLVNDVLHFARLGAA 78

AE005673_1287: domain 1 of 1, from 289 to 355: score 75.3, E = 4.8e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++l ++sHELRTP+taIrg ae+ l+ + +s ++
AE005673_1 289 RRRQLLGDISHELRTPMTAIRGEAEVTLR---------GRKSLDD-- 324

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yre+l++i ++ ++ +Li+dlL ++r +a+
AE005673_1 325 ---------YREALQRITLASGQMGALIEDLLMMARSDAE 355

AE005673_3193: domain 1 of 1, from 276 to 341: score 75.2, E = 5.4e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks flan+sHE+RTPL++++++a+++ + + ls+ q
AE005673_3 276 LKSHFLANMSHEIRTPLNGVLAMADVMAM---------DQLSDIQ-- 311

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re l +i++++ ll +nd+Ldls+ieag
AE005673_3 312 ----------RERLAVIRESGAVLLGVLNDVLDLSKIEAG 341

AE005673_0026: domain 1 of 2, from 527 to 592: score 71.9, E = 4.7e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak +flan+sHE+RTP+++++g ++L++ el++ +
AE005673_0 527 AKAQFLANMSHEIRTPMNGVLGVMHVLKR----------ELPPGDS- 562

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l+ +l +++ l+ L++d+ d+srieag
AE005673_0 563 ----------ASLLNEALAAGQMLSTLLDDVIDISRIEAG 592

AE005673_3458: domain 1 of 1, from 540 to 606: score 68.6, E = 3.9e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f+ n+s ELRTPLt+I+gy+elL++ + se
AE005673_3 540 LKRDFVGNVSYELRTPLTTIIGYSELLER--------ADGISERG-- 576

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r + ++ +a +l r i+d+Ld+++i+ag
AE005673_3 577 ----------RNHVAAVRAAATQLARSIDDVLDMAQIDAG 606

AE005673_2504: domain 1 of 1, from 475 to 540: score 67.0, E = 1.1e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks flan+sHELRTPL+++++ + L e e +++ r
AE005673_2 475 AKSVFLANMSHELRTPLNGVIAIGDRLAE----------EEDPQAR- 510

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+ + + ++++ l++ + d+Ld s+ieag
AE005673_2 511 ----------RELASLVTSSGRLLEQVLGDILDVSKIEAG 540

AE005673_1585: domain 1 of 1, from 660 to 728: score 67.0, E = 1.1e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+s ++ ++sH+LRTPL++++g++ +L +++ ++l + r
AE005673_1 660 FRSALMNSVSHDLRTPLSTVLGASTTLIDYG-------DKLAKPVR- 698

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++ +i++eaerl+r + +lLd++rie g
AE005673_1 699 ----------EDLVVSIREEAERLNRYVANLLDMTRIEGG 728

AE005673_3597: domain 1 of 1, from 216 to 281: score 66.1, E = 2e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks f+a++sHELRTP++aI++ a L e+ +e+s++ +
AE005673_3 216 AKSAFVAMISHELRTPISAILAGAGRLHSEA-------PEASSKVH- 254

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ i +++ ++ L+ndlLd+sr+eag
AE005673_3 255 -------------AQLIADAGGLMRTLLNDLLDFSRLEAG 281

AE005673_0237: domain 1 of 1, from 299 to 364: score 62.6, E = 1.9e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++f+a+++HE+++PLt+Ir ++e+L + ++
AE005673_0 299 AIERFAADVAHEIKNPLTSIRSAIETLDL---------VTEPAAR-- 334

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l +++++++rl+rL+ d+ sr++a+
AE005673_0 335 ----------ARLLAILQNDVNRLDRLVTDISNASRLDAE 364

AE005673_1693: domain 1 of 1, from 203 to 260: score 58.4, E = 3.1e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+s ++a++sHELRTP++aI a L +++
AE005673_1 203 ARSALIAMVSHELRTPINAIVNGAGRLDAGS---------------- 233

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
i ++++ ++ L+ndlLdls+ieag
AE005673_1 234 -------------AGLIADAGRMMRTLLNDLLDLSKIEAG 260

AE005673_1730: domain 1 of 1, from 475 to 546: score 49.9, E = 8e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + ++ ++HE+++PLt I++ ae L++++ + + +s+ ++
AE005673_1 475 AWKDVARRIAHEIKNPLTPIQLSAERLRRKY-----RKEIASDLET- 515

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + ++ti+r++ + r+++++ ++r+ a+
AE005673_1 516 ---------FDRCTDTIIRQVGDIGRMVDEFSAFARMPAP 546

AE005673_1728: domain 1 of 1, from 126 to 190: score 48.5, E = 1.9e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + +l+HE+++PL++Irg+a+lL++ +s+ +
AE005673_1 126 SVVGLGKMLAHEIKNPLAGIRGAAQLLKT----------GASAVD-- 160

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + + i +e++r++rL++++ +s
AE005673_1 161 ----------QPLAQLIVDETDRIRRLVDRMEAFSEQAPT 190

AE005673_2860: domain 1 of 1, from 251 to 317: score 46.2, E = 8.5e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++fl+++ HE+RTPL+a++g+a+++ ++ ++ +
AE005673_2 251 ARRDFLSGINHEFRTPLNAVLGFASVIMG---------AKNTPANV- 287

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++ i++++er+l+ +++ + +e+
AE005673_2 288 ----------RQFAGGIHEAGERILAHFEQIQTVKALEQA 317

AE005673_0756: domain 1 of 1, from 269 to 340: score 43.5, E = 5e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e++++l+HEL++PL+aI ++ ++ +d+ g+++ ++
AE005673_0 269 AMGEMASTLAHELNQPLSAIANLLTGSRRLMDR---GREADQAKV-- 310

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++++++ +a r + i +++d++r +a
AE005673_0 311 ----------RDAIDRAAAQALRAGEVIHRMRDFARRGAS 340

AE005673_2850: domain 1 of 1, from 431 to 497: score 43.0, E = 7.2e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+I+g++++ ++ ++ ++ r
AE005673_2 431 AIGQLTGGVAHDFNNLLTVIIGALDVVER---------HPDDARRR- 467

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++ +l +a+r ++L + lL ++r +
AE005673_2 468 ----------ERMIGAALAAAKRGEKLTQHLLAFARRQPL 497

AE005673_2906: domain 1 of 1, from 241 to 299: score 42.1, E = 1.3e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +la++sH+LRTPLt +++ +++
AE005673_2 241 QRTALLASVSHDLRTPLTRLKLEMAMAEP------------------ 269

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e e ++ ++ ++++i++ L ++r e g
AE005673_2 270 ----------CERMEAMKGDLAEMEHMIDEYLAFARGEGG 299

AE005673_3199: domain 1 of 1, from 359 to 427: score 36.7, E = 4.2e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +l+H++++ L++I+g e++ ++l + + e
AE005673_3 359 AVGQLTGGLAHDFNNLLAGISGSFEMIGARLA------QGRAGEV-- 397

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++yl + +a+r +L +lL +sr ++
AE005673_3 398 ----------ERYLTAGQGAARRAAALTHRLLAFSRRQTL 427

AE005673_2307: domain 1 of 1, from 217 to 283: score 34.6, E = 1.7e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks+ +a+lsHE+R+ Lt++ + ++ ++ + ++
AE005673_2 217 SKSDIVATLSHEIRNGLTGVTHVLAAAAG--------RGGRAAPS-- 253

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re l+ +l++a+ l + +n Ld + +e+g
AE005673_2 254 ----------REQLNAALDAAQDLIAVLNATLDSETAESG 283

AE005673_0247: domain 1 of 1, from 238 to 301: score 34.5, E = 1.8e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ ++a+++HEL TPL++I+ a + + + ++e
AE005673_0 238 ALGALAAAAAHELGTPLATISVVAREMAR---------NAPNDEV-- 273

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re e ++ +a r+++++++l + ea
AE005673_0 274 ----------REDAELMIGQAARCREILQRL--TEMPEAT 301

AE005673_1074: domain 1 of 1, from 312 to 378: score 31.6, E = 1.2e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ LtaI++ ++ Ll +++ +++
AE005673_1 312 AIGQLAGGVAHDFNNLLTAIQLRLDELLH--------RHPVGDPS-- 348

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e l+ i++ + r +L++ lL +sr ++
AE005673_1 349 ----------YEGLNEIRQTGVRAADLVRKLLAFSRKQTV 378

AE005673_1177: domain 1 of 1, from 272 to 329: score 29.9, E = 3.5e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ ++ +++H+LRTPLt +++ +e++ e
AE005673_1 272 DRTAMVGAIAHDLRTPLTRLKFRIEAAPE------------------ 300

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++ ++++++++i+ L + r +
AE005673_1 301 -----------DIRPKLAADIDQMEAMISATLGFVRDTNR 329

AE005673_0529: domain 1 of 1, from 263 to 327: score 27.6, E = 1.6e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e +a + H+LR+ Lt+ +++++ L + l+++++
AE005673_0 263 ALGEAVAKINHDLRNMLTSAQMASDRLAA-----------LGDPKV- 297

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l +++r+++r +L +d++ + + ++
AE005673_0 298 ----------AQALPRLERALDRAINLASDVMAYGKSKEP 327


Histogram of all scores:
score obs exp (one = represents 13 sequences)
----- --- ---
-14 5 0|=
-13 43 2|*===
-12 153 85|======*=====
-11 318 442|========================= *
-10 649 821|================================================== *
-9 718 848|======================================================== *
-8 658 635|================================================*==
-7 494 400|==============================*=======
-6 289 230|=================*=====
-5 154 126|=========*==
-4 88 67|=====*=
-3 62 35|==*==
-2 25 18|=*
-1 18 9|*=
0 8 5|*
1 5 2|*
2 2 1|*
3 0 0|
4 1 0|=
5 1 0|=
6 0 0|
7 1 0|=
8 0 0|
> 9 45 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 224.7433
P(chi-square) = 4.66e-311

Total sequences searched: 3737

Whole sequence top hits:
tophits_s report:
Total hits: 41
Satisfying E cutoff: 41
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 41
Satisfying E cutoff: 41
Total memory: 37K


Acknowledgements:

This research is funded by:

Developed by: