Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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264 projects found  

1 accessions found for Xanthomonas campestris pv. campestris str. ATCC 33913  

Data for AE008922  

Available Atlases
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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: AE008922.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
AE008922_1826 CDS_2160108-2162288 95.2 1.2e-26 1
AE008922_2319 CDS_2777158-2781252 91.6 1.3e-25 1
AE008922_2799 CDS_3363025-3359441 89.2 6.2e-25 1
AE008922_2801 CDS_3370693-3367133 87.7 1.7e-24 2
AE008922_2800 CDS_3367051-3363509 86.1 4.7e-24 1
AE008922_0480 CDS_583060-580757 84.0 1.9e-23 1
AE008922_1164 CDS_1385210-1382070 83.4 2.8e-23 1
AE008922_0953 CDS_1122265-1120922 80.7 1.6e-22 1
AE008922_1154 CDS_1369998-1370912 78.8 5.5e-22 1
AE008922_0821 CDS_984252-982342 76.0 3.4e-21 1
AE008922_3058 CDS_3680507-3679350 75.6 4.4e-21 1
AE008922_3047 CDS_3667947-3669557 67.9 7e-19 1
AE008922_0702 CDS_848807-851467 66.3 2e-18 1
AE008922_3594 CDS_4345234-4343342 65.2 4.1e-18 1
AE008922_3839 CDS_4623184-4624617 65.0 4.6e-18 1
AE008922_2114 CDS_2538843-2542283 64.1 8.3e-18 1
AE008922_4020 CDS_4841494-4838051 63.6 1.1e-17 1
AE008922_2000 CDS_2397294-2396023 61.8 3.8e-17 1
AE008922_0776 CDS_939565-940836 58.1 4.2e-16 1
AE008922_0188 CDS_245306-246355 57.2 7.6e-16 1
AE008922_1161 CDS_1380668-1379544 53.0 1.2e-14 1
AE008922_3299 CDS_3985430-3988075 51.3 3.6e-14 1
AE008922_3302 CDS_3991996-3990611 49.4 1.2e-13 1
AE008922_2647 CDS_3192868-3191420 45.6 1.5e-12 1
AE008922_3387 CDS_4091728-4089917 45.1 2e-12 1
AE008922_1101 CDS_1311312-1312595 44.6 2.8e-12 1
AE008922_2545 CDS_3074868-3076823 44.1 3.8e-12 1
AE008922_1627 CDS_1924967-1927873 38.2 1.8e-10 1
AE008922_2385 CDS_2886824-2883816 37.4 3.1e-10 1
AE008922_4088 CDS_4939479-4940726 35.9 8.1e-10 1
AE008922_1630 CDS_1929916-1932018 35.7 9e-10 1
AE008922_1165 CDS_1385217-1386530 30.1 3.6e-08 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
AE008922_1826 1/1 188 253 .. 1 87 [] 95.2 1.2e-26
AE008922_2319 1/1 643 708 .. 1 87 [] 91.6 1.3e-25
AE008922_2799 1/1 823 888 .. 1 87 [] 89.2 6.2e-25
AE008922_2801 1/2 807 872 .. 1 87 [] 87.4 2.1e-24
AE008922_2800 1/1 807 872 .. 1 87 [] 86.1 4.7e-24
AE008922_0480 1/1 110 175 .. 1 87 [] 84.0 1.9e-23
AE008922_1164 1/1 365 433 .. 1 87 [] 83.4 2.8e-23
AE008922_0953 1/1 214 278 .. 1 87 [] 80.7 1.6e-22
AE008922_1154 1/1 69 137 .. 1 87 [] 78.8 5.5e-22
AE008922_0821 1/1 275 340 .. 1 87 [] 76.0 3.4e-21
AE008922_3058 1/1 176 242 .. 1 87 [] 75.6 4.4e-21
AE008922_3047 1/1 314 380 .. 1 87 [] 67.9 7e-19
AE008922_0702 1/1 652 720 .. 1 87 [] 66.3 2e-18
AE008922_3594 1/1 250 316 .. 1 87 [] 65.2 4.1e-18
AE008922_3839 1/1 247 312 .. 1 87 [] 65.0 4.6e-18
AE008922_2114 1/1 761 827 .. 1 87 [] 64.1 8.3e-18
AE008922_4020 1/1 783 849 .. 1 87 [] 63.6 1.1e-17
AE008922_2000 1/1 177 242 .. 1 87 [] 61.8 3.8e-17
AE008922_0776 1/1 213 279 .. 1 87 [] 58.1 4.2e-16
AE008922_0188 1/1 120 187 .. 1 87 [] 57.2 7.6e-16
AE008922_1161 1/1 156 222 .. 1 87 [] 53.0 1.2e-14
AE008922_3299 1/1 516 581 .. 1 87 [] 51.3 3.6e-14
AE008922_3302 1/1 242 307 .. 1 87 [] 49.4 1.2e-13
AE008922_2647 1/1 258 323 .. 1 87 [] 45.6 1.5e-12
AE008922_3387 1/1 368 436 .. 1 87 [] 45.1 2e-12
AE008922_1101 1/1 212 278 .. 1 87 [] 44.6 2.8e-12
AE008922_2545 1/1 433 499 .. 1 87 [] 44.1 3.8e-12
AE008922_1627 1/1 589 657 .. 1 87 [] 38.2 1.8e-10
AE008922_2385 1/1 631 699 .. 1 87 [] 37.4 3.1e-10
AE008922_4088 1/1 182 247 .. 1 87 [] 35.9 8.1e-10
AE008922_1630 1/1 326 394 .. 1 87 [] 35.7 9e-10
AE008922_1165 1/1 205 271 .. 1 87 [] 30.1 3.6e-08

Alignments of top-scoring domains:
AE008922_1826: domain 1 of 1, from 188 to 253: score 95.2, E = 1.2e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+flan+sHE+RTPL++++g++e+L + t l++eq
AE008922_1 188 AKSRFLANMSHEFRTPLNGLSGMTEVLAT---------TRLDAEQ-- 223

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e l+ti+ +a++ll+L++++Ld+s ieag
AE008922_1 224 ----------KECLNTIQASARSLLSLVEEVLDISAIEAG 253

AE008922_2319: domain 1 of 1, from 643 to 708: score 91.6, E = 1.3e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks+flan+sHE+RTP++aI+g++ lL++ +el+
AE008922_2 643 SKSDFLANMSHEIRTPMNAILGMLYLLQR---------SELPGAA-- 678

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++ +i+r+a++ll++ind+Ld+s+ieag
AE008922_2 679 ----------QDMVTKIDRSARSLLEIINDILDFSKIEAG 708

AE008922_2799: domain 1 of 1, from 823 to 888: score 89.2, E = 6.2e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++fla+l HE RTP+t+++g++elLl+ t l+ +q
AE008922_2 823 AKTRFLATLGHEVRTPMTGVLGMSELLLK---------TQLDHKQ-- 858

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r y+e+i+r++ +llrL+nd Ldl+rie+g
AE008922_2 859 ----------RSYTESIRRAGSHLLRLVNDALDLARIESG 888

AE008922_2801: domain 1 of 2, from 807 to 872: score 87.4, E = 2.1e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++fla+l HE RTP+t+++g++elLl t+l+ q
AE008922_2 807 AKTRFLATLGHEVRTPMTGVLGMSELLLQ---------TPLDGRQ-- 842

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ y + i++++++llrL+nd Ldl+rieag
AE008922_2 843 ----------QGYASAIQSAGKHLLRLVNDALDLARIEAG 872

AE008922_2800: domain 1 of 1, from 807 to 872: score 86.1, E = 4.7e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla+l HE RTP+t+++g++elLl+ t+l+++q
AE008922_2 807 AKSNFLATLGHEVRTPMTGVLGMSELLLA---------TPLDAKQ-- 842

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r ++ i++++ +llrL+nd Ldl+rieag
AE008922_2 843 ----------RGHVDAIRKAGAHLLRLVNDALDLARIEAG 872

AE008922_0480: domain 1 of 1, from 110 to 175: score 84.0, E = 1.9e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+efla++sHE+RTPL++I+ ++el+ + + ls +q
AE008922_0 110 AKGEFLATMSHEIRTPLNGIIPMLELISR---------GQLSLDQ-- 145

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l+t+ ++ +llr+++d+Ld+s++ea+
AE008922_0 146 ----------RDMLQTATGSSLQLLRIVDDILDYSKLEAN 175

AE008922_1164: domain 1 of 1, from 365 to 433: score 83.4, E = 2.8e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHELRTPL++ + +a+lL + +d++l++eq
AE008922_1 365 YKSEFLANMSHELRTPLNSSLILAKLLAD------NKDHTLTAEQ-- 403

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+y + i+++ + ll+Lind+Ldls+ieag
AE008922_1 404 ----------VKYAQAIHSSNNDLLALINDILDLSKIEAG 433

AE008922_0953: domain 1 of 1, from 214 to 278: score 80.7, E = 1.6e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+an+sHELRTPLt++ gy+++L ++ ++
AE008922_0 214 VRRDFVANVSHELRTPLTVVHGYLDMLDP---------EDFPDSG-- 249

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+l ++++++r+ +L++dlL+lsr+e++
AE008922_0 250 -----------PMLAEMRKQSQRMAQLVEDLLTLSRLESQ 278

AE008922_1154: domain 1 of 1, from 69 to 137: score 78.8, E = 5.5e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+fl+++sHE+RTPL +I+ + lL++++d ++l++eq
AE008922_1 69 LKSRFLSYMSHEFRTPLGSILSITRLLEDGMD------GPLNAEQ-- 107

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++ + +++ l+++++dlLdl++ieag
AE008922_1 108 ----------LKQVRFVSASTRELSEMVDDLLDLAKIEAG 137

AE008922_0821: domain 1 of 1, from 275 to 340: score 76.0, E = 3.4e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+efl+ sHELRTPL+aI+gya++L++ +l+e+ +
AE008922_0 275 AKTEFLSRSSHELRTPLNAILGYAQVLEM----------DLPEPGH- 310

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l+ il ++++ll Li +lLd++riea
AE008922_0 311 ----------RRHLQHILGAGRHLLGLITELLDIARIEAD 340

AE008922_3058: domain 1 of 1, from 176 to 242: score 75.6, E = 4.4e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +ef a++sHELRTPL++Irg++elLl+ ++l+e+
AE008922_3 176 RDREFNADVSHELRTPLAVIRGATELLLT--------KPNLDEKV-- 212

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l++i+r+ +++++Li lL lsr e g
AE008922_3 213 ----------LQRLQRIQRAEQQCSDLIGSLLLLSRNERG 242

AE008922_3047: domain 1 of 1, from 314 to 380: score 67.9, E = 7e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++f a+l+HE+R+PL+aI +++lL+e +++ ++ +
AE008922_3 314 AMGRFSASLAHEIRNPLAAINYASQLLEE--------SPDIGDAD-- 350

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l++i+++ +r + +++ +L l+r e
AE008922_3 351 ----------RRLLQIIHQQCQRTNGIVESVLGLARRERA 380

AE008922_0702: domain 1 of 1, from 652 to 720: score 66.3, E = 2e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+s +l+++sH+LR PL++++g a+ L e++ +++++ +r
AE008922_0 652 LRSALLSSVSHDLRSPLASMIGSASSLAEYG-------EAMDATDR- 690

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +leti+ e+erl+r i++lLd++r+++
AE008922_0 691 ----------RSLLETIQLEGERLDRYIQNLLDMTRLGHT 720

AE008922_3594: domain 1 of 1, from 250 to 316: score 65.2, E = 4.1e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+efla+lsHELRTPLt+I+g +elLl +++ +++ + +
AE008922_3 250 LKDEFLATLSHELRTPLTTILGWSELLLQRVE-----EGHPNYKG-- 289

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l++i ++a+ rLi+d+Ldls + g
AE008922_3 290 -------------LSVIASSARAQKRLISDMLDLSSMLLG 316

AE008922_3839: domain 1 of 1, from 247 to 312: score 65.0, E = 4.6e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++f+a+++HELRTPL+a+ +yae++l+ t+l +++
AE008922_3 247 AERDFVADAAHELRTPLSALHAYAEVALR--------ATTLESKD-- 283

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+l+++l+ a+r +rL ++lLdl+r++ag
AE008922_3 284 -----------AALQRLLETARRSNRLAEQLLDLARLDAG 312

AE008922_2114: domain 1 of 1, from 761 to 827: score 64.1, E = 8.3e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+efla+lsHELRTPL+aI+g + l+++ ++ + ++
AE008922_2 761 VKDEFLATLSHELRTPLNAILGWSRLMQA---------DAFEPAKL- 797

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l +i+r+a+ ++i+dlLd+s i +g
AE008922_2 798 ----------GKGLVVIERSARAQTQIIDDLLDMSAILSG 827

AE008922_4020: domain 1 of 1, from 783 to 849: score 63.6, E = 1.1e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++fla++sH+ +PL+a r++a++L+e ++++ e++
AE008922_4 783 SKTRFLAAISHDVLQPLNAARLFASALRE---------SHQNNEEQ- 819

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r + e+++ +++ ++L++ lLd sr++ag
AE008922_4 820 ----------RHLAERVDASLRAAEELLDGLLDVSRLDAG 849

AE008922_2000: domain 1 of 1, from 177 to 242: score 61.8, E = 3.8e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+a l H+LR PL +I++++e+L+ +++s+
AE008922_2 177 LRDQFIAVLGHDLRSPLQSISMATEMLQL---------EPQSPRG-- 212

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l i+ ++ r+ L++d+Ld++r + g
AE008922_2 213 ----------ASLLGHIRTSLTRIGGLVDDVLDFARGRLG 242

AE008922_0776: domain 1 of 1, from 213 to 279: score 58.1, E = 4.2e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + f++++sHELRTPLt+Ir +++++l+ d+el + +
AE008922_0 213 RERNFTRDASHELRTPLTVIRVASDMALA--------DEELAPRT-- 249

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l++i+r+++ +++ i+ +L l+r +
AE008922_0 250 ----------QRSLRRIQRAGRDMEAVIDAFLILAREAEI 279

AE008922_0188: domain 1 of 1, from 120 to 187: score 57.2, E = 7.6e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+s l +l+HELR+PL++++g+a+lL +++ + ++e++
AE008922_0 120 ALSAALKGLAHELRNPLAGLKGAAQLLARRA-------AGRDEDE-- 157

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re++e i e+erl+ L+++lL s ++
AE008922_0 158 ----------RELIELIGTEIERLNTLLERLLSPSPLRPH 187

AE008922_1161: domain 1 of 1, from 156 to 222: score 53.0, E = 1.2e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++a l H+LRTPL++I++ a+ L + + +
AE008922_1 156 LNETMMAVLTHDLRTPLSVILLCADKLGL---------DVPEDGSA- 192

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ le ++++a+r+ r++++lLd+sr+++
AE008922_1 193 ----------ARTLEHLENSARRMARMVEQLLDFSRLRTD 222

AE008922_3299: domain 1 of 1, from 516 to 581: score 51.3, E = 3.6e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f+a++ H+L +PL+a r+++++L+ +
AE008922_3 516 YKTRFVASAVHDLLQPLNAARMFVSVLRG---------QVHATGS-- 551

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++ i+ ++ ++++n lLd+sr+eag
AE008922_3 552 ----------AQLVDNIDGALAAQDAILNSLLDISRLEAG 581

AE008922_3302: domain 1 of 1, from 242 to 307: score 49.4, E = 1.2e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ f+a ++H++RTPL+a+r+ a+l+ + + ++ ++
AE008922_3 242 TLRAFMAEAAHQMRTPLAALRAQAQLAMD----------DDDPRDM- 277

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l i+r a +++rL+n+lL + +
AE008922_3 278 ----------QRSLVAIERNASHMSRLLNQLLSDASVIHR 307

AE008922_2647: domain 1 of 1, from 258 to 323: score 45.6, E = 1.5e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + +l HE++ PL+aIrg++elL e +l+e +r
AE008922_2 258 YVEHYVQSLTHEMKSPLAAIRGASELLTE----------PLPECDR- 293

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++ +i+ + +rl + i+ lL l+ e+
AE008922_2 294 ----------QHFVASIRAQEQRLTETIDKLLALAEVEQH 323

AE008922_3387: domain 1 of 1, from 368 to 436: score 45.1, E = 2e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f ++sH+LR PL + g+++ L + + +++ +e+
AE008922_3 368 ELEAFSYSVSHDLRAPLRHVAGFSDKLAR-------HLGDAADEKS- 406

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r y e+i ++a+r+ +Li+dlL +sr++
AE008922_3 407 ----------RHYMEVISSSARRMASLIDDLLVYSRLGRS 436

AE008922_1101: domain 1 of 1, from 212 to 278: score 44.6, E = 2.8e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + f+ ++sHELRTP+++I +ael+le ++ ++ +
AE008922_1 212 RERAFIDSASHELRTPIAVIGNAAELALE---------QPDTPAVV- 248

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r l++i + + ++Li lL l++
AE008922_1 249 ----------RHQLQRIAQTSGAVEQLITLLLVLAKDPGR 278

AE008922_2545: domain 1 of 1, from 433 to 499: score 44.1, E = 3.8e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + ++a+++HE R+PL +I+ +++++++ t +
AE008922_2 433 AVGALMAGVAHEVRNPLFGISSTLDAMEA---------TFNTGRSG- 469

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ e+++re++rl++L dlL++ r ++
AE008922_2 470 ----------GRHQEVLRREVRRLNKLMTDLLEYGRPPTE 499

AE008922_1627: domain 1 of 1, from 589 to 657: score 38.2, E = 1.8e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +l+H++++ LtaI+ +elL++ + +++ +rl
AE008922_1 589 AVGQLTGGLAHDFNNLLTAISVGLELLQT--------RIAQGRYDRL 627

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y+e ++++a r +L ++lL +sr ++
AE008922_1 628 ----------ERYVEMAQSSAARAAALTQRLLAFSRRQTL 657

AE008922_2385: domain 1 of 1, from 631 to 699: score 37.4, E = 3.1e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +l+H++++ Lt+I+g +el+++++ g + ++ +
AE008922_2 631 AVGQLTGGLAHDFNNLLTGISGSLELMQTRM-----GQGRFDDVE-- 670

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+ +++++a r +L +lL +sr ++
AE008922_2 671 -----------CYIAVAQKAAGRAAALTHRLLAFSRRQTL 699

AE008922_4088: domain 1 of 1, from 182 to 247: score 35.9, E = 8.1e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ef+ l H+LR+PL ++ + +++L + ls q
AE008922_4 182 LREEFIGILGHDLRNPLQSMHAVVDMLSI---------DQLSQRQ-- 217

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++++r+++r+++Li+ d++r +
AE008922_4 218 ----------GGAIRSLQRSLRRMEELIDFASDFARGIER 247

AE008922_1630: domain 1 of 1, from 326 to 394: score 35.7, E = 9e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+I+ +++l++ + d + +se
AE008922_1 326 AVGQLTGGIAHDFNNMLTGILSALDLARLRID------QGRSEGL-- 364

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l+++ +a r +L ++lL +sr ++
AE008922_1 365 ----------GRFLDVASASALRAAALTQRLLAFSRRQSL 394

AE008922_1165: domain 1 of 1, from 205 to 271: score 30.1, E = 3.6e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++++ +l+H++++ Lt++ + ++l+ ++ ++ +
AE008922_1 205 ALGRLTLGLAHDFNNLLTVMVTSLDLIAL--------RAGEDART-- 241

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r ++e ++ +++r L ++lL ++r +
AE008922_1 242 ----------RMLVEAAQTAVDRGTLLTRQLLAFARGQRL 271


Histogram of all scores:
score obs exp (one = represents 14 sequences)
----- --- ---
-14 13 0|=
-13 43 3|*===
-12 155 95|======*=====
-11 351 495|========================== *
-10 675 919|================================================= *
-9 811 949|==========================================================*
-8 694 710|==================================================*
-7 553 448|===============================*========
-6 373 257|==================*========
-5 193 141|==========*===
-4 133 75|=====*====
-3 76 39|==*===
-2 22 20|=*
-1 24 10|*=
0 9 5|*
1 6 2|*
2 6 1|*
3 0 0|
4 0 0|
5 1 0|=
> 6 43 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 352.8487
P(chi-square) = 0

Total sequences searched: 4181

Whole sequence top hits:
tophits_s report:
Total hits: 32
Satisfying E cutoff: 32
Total memory: 21K

Domain top hits:
tophits_s report:
Total hits: 32
Satisfying E cutoff: 32
Total memory: 33K


Acknowledgements:

This research is funded by:

Developed by: