Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
Search:
264 projects found  

1 accessions found for Pseudomonas putida KT2440  

Data for AE015451  

Available Atlases
Other Plots
hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: AE015451.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
AE015451_1637 CDS_1844789-1842036 101.7 2.3e-28 1
AE015451_4120 CDS_4714769-4716700 93.0 7e-26 1
AE015451_4759 CDS_5486669-5489440 90.7 3.1e-25 1
AE015451_1860 CDS_2099886-2097529 89.1 8.8e-25 1
AE015451_3721 CDS_4292584-4289117 84.2 2.1e-23 1
AE015451_5252 CDS_6065868-6067175 83.4 3.5e-23 1
AE015451_3690 CDS_4256124-4253872 81.9 9.3e-23 1
AE015451_2080 CDS_2399653-2396018 75.1 8.3e-21 1
AE015451_3381 CDS_3861075-3864356 73.9 1.7e-20 1
AE015451_4106 CDS_4700685-4698031 73.6 2.2e-20 1
AE015451_0132 CDS_140502-138721 71.6 7.7e-20 1
AE015451_2136 CDS_2465634-2464282 70.8 1.3e-19 1
AE015451_1409 CDS_1621083-1622474 66.5 2.2e-18 1
AE015451_4978 CDS_5753796-5754881 65.0 5.7e-18 1
AE015451_5315 CDS_6135650-6137059 64.3 9.1e-18 1
AE015451_4716 CDS_5444777-5442789 63.9 1.2e-17 1
AE015451_1682 CDS_1890269-1886790 61.8 4.7e-17 1
AE015451_1172 CDS_1356818-1358425 61.3 6.5e-17 1
AE015451_1425 CDS_1638735-1637353 60.8 8.8e-17 1
AE015451_2688 CDS_3103470-3104834 58.9 3.2e-16 2
AE015451_0030 CDS_33564-34982 58.4 4.3e-16 1
AE015451_0893 CDS_1042156-1043499 58.0 5.7e-16 1
AE015451_4445 CDS_5118225-5119565 58.0 5.7e-16 1
AE015451_3341 CDS_3816116-3814857 57.5 7.9e-16 1
AE015451_4316 CDS_4963653-4962436 57.3 8.9e-16 1
AE015451_0267 CDS_329247-327880 53.6 9.7e-15 1
AE015451_2638 CDS_3051229-3053196 52.9 1.6e-14 1
AE015451_3617 CDS_4145914-4148097 52.5 2.1e-14 1
AE015451_2657 CDS_3072259-3073962 51.8 3.2e-14 1
AE015451_1639 CDS_1845706-1847082 50.1 9.7e-14 1
AE015451_4171 CDS_4797982-4796660 49.6 1.3e-13 1
AE015451_3718 CDS_4287733-4286507 48.9 2.2e-13 1
AE015451_3928 CDS_4477990-4476872 48.2 3.4e-13 1
AE015451_0526 CDS_619995-618667 46.7 9.2e-13 1
AE015451_3389 CDS_3874136-3872685 45.7 1.7e-12 2
AE015451_2333 CDS_2687718-2685331 43.6 7e-12 1
AE015451_4634 CDS_5333569-5336544 42.7 1.3e-11 1
AE015451_3388 CDS_3872377-3870884 41.8 2.1e-11 1
AE015451_0261 CDS_319739-317925 41.1 3.5e-11 1
AE015451_0245 CDS_301835-303148 40.7 4.6e-11 1
AE015451_3398 CDS_3887853-3885736 40.2 6e-11 1
AE015451_3512 CDS_4017563-4019224 40.1 6.8e-11 1
AE015451_3795 CDS_4361119-4359959 36.6 6.7e-10 1
AE015451_3513 CDS_4019287-4021353 35.5 1.3e-09 1
AE015451_1058 CDS_1223207-1221300 34.4 2.8e-09 1
AE015451_1339 CDS_1540565-1538535 34.3 3e-09 1
AE015451_1004 CDS_1154841-1156295 33.9 3.7e-09 1
AE015451_1391 CDS_1598757-1597000 33.6 4.5e-09 1
AE015451_3397 CDS_3884113-3885729 32.9 7.2e-09 1
AE015451_2335 CDS_2690476-2688209 32.0 1.3e-08 1
AE015451_1177 CDS_1361609-1362955 31.2 2.2e-08 1
AE015451_3421 CDS_3914075-3912774 29.5 6.8e-08 1
AE015451_3519 CDS_4028426-4027020 28.2 1.5e-07 1
AE015451_5173 CDS_5979347-5984395 27.1 3.2e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
AE015451_1637 1/1 285 350 .. 1 87 [] 101.7 2.3e-28
AE015451_4120 1/1 264 329 .. 1 87 [] 93.0 7e-26
AE015451_4759 1/1 397 462 .. 1 87 [] 90.7 3.1e-25
AE015451_1860 1/1 305 370 .. 1 87 [] 89.1 8.8e-25
AE015451_3721 1/1 486 554 .. 1 87 [] 84.2 2.1e-23
AE015451_5252 1/1 205 272 .. 1 87 [] 83.4 3.5e-23
AE015451_3690 1/1 267 332 .. 1 87 [] 81.9 9.3e-23
AE015451_2080 1/1 711 777 .. 1 87 [] 75.1 8.3e-21
AE015451_3381 1/1 598 664 .. 1 87 [] 73.9 1.7e-20
AE015451_4106 1/1 651 719 .. 1 87 [] 73.6 2.2e-20
AE015451_0132 1/1 373 441 .. 1 87 [] 71.6 7.7e-20
AE015451_2136 1/1 232 298 .. 1 87 [] 70.8 1.3e-19
AE015451_1409 1/1 248 313 .. 1 87 [] 66.5 2.2e-18
AE015451_4978 1/1 132 197 .. 1 87 [] 65.0 5.7e-18
AE015451_5315 1/1 239 305 .. 1 87 [] 64.3 9.1e-18
AE015451_4716 1/1 418 483 .. 1 87 [] 63.9 1.2e-17
AE015451_1682 1/1 796 863 .. 1 87 [] 61.8 4.7e-17
AE015451_1172 1/1 308 373 .. 1 87 [] 61.3 6.5e-17
AE015451_1425 1/1 240 306 .. 1 87 [] 60.8 8.8e-17
AE015451_2688 2/2 237 302 .. 1 87 [] 58.6 3.7e-16
AE015451_0030 1/1 241 307 .. 1 87 [] 58.4 4.3e-16
AE015451_0893 1/1 222 288 .. 1 87 [] 58.0 5.7e-16
AE015451_4445 1/1 228 292 .. 1 87 [] 58.0 5.7e-16
AE015451_3341 1/1 200 262 .. 1 87 [] 57.5 7.9e-16
AE015451_4316 1/1 184 252 .. 1 87 [] 57.3 8.9e-16
AE015451_0267 1/1 253 311 .. 1 87 [] 53.6 9.7e-15
AE015451_2638 1/1 290 355 .. 1 87 [] 52.9 1.6e-14
AE015451_3617 1/1 361 427 .. 1 87 [] 52.5 2.1e-14
AE015451_2657 1/1 206 271 .. 1 87 [] 51.8 3.2e-14
AE015451_1639 1/1 233 292 .. 1 87 [] 50.1 9.7e-14
AE015451_4171 1/1 224 288 .. 1 87 [] 49.6 1.3e-13
AE015451_3718 1/1 168 241 .. 1 87 [] 48.9 2.2e-13
AE015451_3928 1/1 150 216 .. 1 87 [] 48.2 3.4e-13
AE015451_0526 1/1 232 291 .. 1 87 [] 46.7 9.2e-13
AE015451_3389 2/2 272 336 .. 1 87 [] 44.3 4.2e-12
AE015451_2333 1/1 427 495 .. 1 87 [] 43.6 7e-12
AE015451_4634 1/1 756 822 .. 1 87 [] 42.7 1.3e-11
AE015451_3388 1/1 272 336 .. 1 87 [] 41.8 2.1e-11
AE015451_0261 1/1 370 438 .. 1 87 [] 41.1 3.5e-11
AE015451_0245 1/1 221 280 .. 1 87 [] 40.7 4.6e-11
AE015451_3398 1/1 335 403 .. 1 87 [] 40.2 6e-11
AE015451_3512 1/1 173 241 .. 1 87 [] 40.1 6.8e-11
AE015451_3795 1/1 153 218 .. 1 87 [] 36.6 6.7e-10
AE015451_3513 1/1 315 383 .. 1 87 [] 35.5 1.3e-09
AE015451_1058 1/1 409 477 .. 1 87 [] 34.4 2.8e-09
AE015451_1339 1/1 412 502 .. 1 87 [] 34.3 3e-09
AE015451_1004 1/1 282 325 .. 1 65 [. 33.9 3.7e-09
AE015451_1391 1/1 362 426 .. 1 83 [. 33.6 4.5e-09
AE015451_3397 1/1 171 239 .. 1 87 [] 32.9 7.2e-09
AE015451_2335 1/1 532 600 .. 1 87 [] 32.0 1.3e-08
AE015451_1177 1/1 238 300 .. 1 87 [] 31.2 2.2e-08
AE015451_3421 1/1 212 276 .. 1 87 [] 29.5 6.8e-08
AE015451_3519 1/1 241 314 .. 1 87 [] 28.2 1.5e-07
AE015451_5173 1/1 1461 1527 .. 1 83 [. 27.1 3.2e-07

Alignments of top-scoring domains:
AE015451_1637: domain 1 of 1, from 285 to 350: score 101.7, E = 2.3e-28
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHE+RTPL++I+g+++lL++ +e+++ q
AE015451_1 285 IKSEFLANMSHEIRTPLNGILGFTHLLQK---------SEMTPRQ-- 320

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+yl+ti+++a+ ll +in++Ld+s+ieag
AE015451_1 321 ----------LDYLNTIEKSADNLLGIINEILDFSKIEAG 350

AE015451_4120: domain 1 of 1, from 264 to 329: score 93.0, E = 7e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHELRTP+++++g+++lL++ t+ls+eq
AE015451_4 264 AKSDFLAMMSHELRTPMNGVLGMLQLLET---------TPLSSEQ-- 299

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y+ ++ +++ +ll+ ind+Ld+srie
AE015451_4 300 ----------ADYTAVASESTGHLLKVINDILDFSRIERA 329

AE015451_4759: domain 1 of 1, from 397 to 462: score 90.7, E = 3.1e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak efla +sHE+RTP+++++g++elLl t+ls +q
AE015451_4 397 AKAEFLAKISHEIRTPMNGVLGMTELLLG---------TPLSVKQ-- 432

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+y++ti+++++ ll Lin++Ld+s++e+
AE015451_4 433 ----------RDYVQTIHSAGNELLTLINEILDISKLESR 462

AE015451_1860: domain 1 of 1, from 305 to 370: score 89.1, E = 8.8e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+ flan+sHE+RTPL++++g++ l+l+ +l++eq
AE015451_1 305 ARAAFLANMSHEIRTPLNGMLGMIALALD---------NPLPSEQ-- 340

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l +++++++ l +L+nd+Ldls+ +ag
AE015451_1 341 ----------RQQLAIAHDSGKVLVELLNDILDLSKFDAG 370

AE015451_3721: domain 1 of 1, from 486 to 554: score 84.2, E = 2.1e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHELRTPL++ + +a+lL e+++ ++lseeq
AE015451_3 486 YKSEFLANMSHELRTPLNSSLILAKLLAENAE------GNLSEEQ-- 524

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ e+i+++++ ll+Lind+Ld+++ eag
AE015451_3 525 ----------VKFAESIYSAGNDLLNLINDILDIAKVEAG 554

AE015451_5252: domain 1 of 1, from 205 to 272: score 83.4, E = 3.5e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+an+sHELRTPLt+I gy+e+Ll+++ ++ ++
AE015451_5 205 MRKDFVANVSHELRTPLTVITGYLETLLDNV-------EDVNPRW-- 242

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l+ + +++ r++ L+ndlL l+++ea
AE015451_5 243 ----------SRALQQMSQQGSRMQTLLNDLLLLAKLEAT 272

AE015451_3690: domain 1 of 1, from 267 to 332: score 81.9, E = 9.3e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHELRTPL++I+g+aelL+ + l +
AE015451_3 267 AKSRFLATMSHELRTPLNGILGMAELLRG---------GRLEVAD-- 302

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ +e +++++e ll+++n++L ++r+e+g
AE015451_3 303 ----------RQRVEALYKAGEGLLAILNEVLYFARLEEG 332

AE015451_2080: domain 1 of 1, from 711 to 777: score 75.1, E = 8.3e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla++sHE+RTP++a++g++el+ + +++++ +
AE015451_2 711 AKSTFLATISHEIRTPMNAVIGMLELAVK--------RADQGRVD-- 747

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +le ++++a+ ll Li d+Ld+ rie+g
AE015451_2 748 ----------RSALELAHHSAKDLLGLIGDILDIVRIESG 777

AE015451_3381: domain 1 of 1, from 598 to 664: score 73.9, E = 1.7e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks fla++sHE+RTP++a++g++el+le++ ++ +s+ q+
AE015451_3 598 TKSTFLATMSHEIRTPMNAVIGLLELALEDS------RSGRSDAQT- 637

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l+t++++a ll+Li d+Ld+srie+g
AE015451_3 638 -------------LQTAHDSAIGLLELIGDILDISRIESG 664

AE015451_4106: domain 1 of 1, from 651 to 719: score 73.6, E = 2.2e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+s +la++sH+LRTPLta+rg ++ Ll+ + ++ ++e+r
AE015451_4 651 LRSALLASVSHDLRTPLTAMRGSIDSLLALG-------DAIPAEDR- 689

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+le ++eaerl+r i++lLd++r+++g
AE015451_4 690 ----------RELLEGTRNEAERLDRYIQNLLDMTRLGHG 719

AE015451_0132: domain 1 of 1, from 373 to 441: score 71.6, E = 7.7e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+sef+ +sHELRTP+t++ ++ lL+e++ + ++e r
AE015451_0 373 VRSEFVLRASHELRTPVTGMHMAFGLLRERV--------KFPPEARE 411

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++leti +e +rl +LindlL +sr ++g
AE015451_0 412 ----------NDLLETIGEEMQRLTQLINDLLNFSRYQSG 441

AE015451_2136: domain 1 of 1, from 232 to 298: score 70.8, E = 1.3e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s f a+++HELRTPL+ +++++++ l+ ++s e+
AE015451_2 232 RLSAFSADIAHELRTPLSNLLTHTQVTLT---------RPRSLEE-- 267

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yre+l+ l+e++ + ++ind+L l+++++g
AE015451_2 268 ---------YREALHGNLEELQWMAQMINDMLFLAKADHG 298

AE015451_1409: domain 1 of 1, from 248 to 313: score 66.5, E = 2.2e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+a+++HELRTPL+a+++ +el l+ + +++
AE015451_1 248 RQAQFIADAAHELRTPLAALKARVELGLR----------SAEPQE-- 282

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+r+ le++ + ++rl +L n+lL l+r e+g
AE015451_1 283 ---------WRQTLESAAQGTDRLTHLANQLLSLARVENG 313

AE015451_4978: domain 1 of 1, from 132 to 197: score 65.0, E = 5.7e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++l+HE+++PL +Irg+a+lL + el+ee +
AE015451_4 132 TTKMLVRGLAHEIKNPLGGIRGAAQLLAR----------ELPEEGL- 167

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+y+++i++ea+rl++L++++L ++ +
AE015451_4 168 ----------RDYTNVIIEEADRLRNLVDRMLGSNKLPSL 197

AE015451_5315: domain 1 of 1, from 239 to 305: score 64.3, E = 9.1e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s f a+++HELRTP++ +++++e+ l+ +++ +
AE015451_5 239 RLSNFSADIAHELRTPVSNLLTHTEVVLT---------RKRDVDA-- 274

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+e l + l++++r++r+i+d+L l++ ++g
AE015451_5 275 ---------YEENLYSNLEDLKRMSRMIDDMLFLAKSDNG 305

AE015451_4716: domain 1 of 1, from 418 to 483: score 63.9, E = 1.2e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+efla++ HELRTP+++++g +el+ + ++++e
AE015451_4 418 LKDEFLASVTHELRTPMNGVIGSLELMHT---------LPMGAEM-- 453

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y +t+ +a+ + ++++ +L+ls ++ag
AE015451_4 454 ----------AQYHHTAVGSAQGMMDMVDAILTLSELQAG 483

AE015451_1682: domain 1 of 1, from 796 to 863: score 61.8, E = 4.7e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++fla++sH+L +PL+a r+++ +L ++ + ++ee
AE015451_1 796 SKTRFLAAVSHDLMQPLNAARLFSAALSQQA-------EGMNEEA-- 833

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++++ +++++++ ++Li+dlLd+sr+e+g
AE015451_1 834 ----------RQLVQHMDSSLRSAEELISDLLDISRLENG 863

AE015451_1172: domain 1 of 1, from 308 to 373: score 61.3, E = 6.5e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++e+++++sHELRTP++ +r+ +e+++ + +e+ r
AE015451_1 308 MQRELVRAVSHELRTPVARLRFGLEMIES----------ATTEQVR- 343

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l ++ +++ l++L++++L+++r+e+g
AE015451_1 344 ----------AKHLAGMDGDIQDLDKLVDEMLTYARLEQG 373

AE015451_1425: domain 1 of 1, from 240 to 306: score 60.8, E = 8.8e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s+f +l+HELRTPL+ ++g a++ l+ e++
AE015451_1 240 QLSQFSDDLAHELRTPLSNLMGKAQVTLA---------RERDNAN-- 275

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yre le ++e+ rl+r+ind+L l++ ++
AE015451_1 276 ---------YREVLEDSIEELTRLNRIINDMLFLAQVSQP 306

AE015451_2688: domain 2 of 2, from 237 to 302: score 58.6, E = 3.7e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +f+a+++HE+RTPL+++r++a+ +l+ + ++e
AE015451_2 237 REHRFIADAAHEMRTPLAVLRLHAQNALA---------ASNDAER-- 272

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l + ++rl r +n+lL+l+r e
AE015451_2 273 ----------QKALGFLVGGVDRLTRVVNQLLTLARVEPR 302

AE015451_0030: domain 1 of 1, from 241 to 307: score 58.4, E = 4.3e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s+f +l+HELR PL+ ++g a+++l+ e+s +
AE015451_0 241 QLSQFSDDLAHELRAPLSNLMGKAQVALT---------RERSLSE-- 276

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yre le+ +e++r++r+++d+L l++ ++
AE015451_0 277 ---------YREVLESCTEELDRMSRMVSDMLFLAQVSHP 307

AE015451_0893: domain 1 of 1, from 222 to 288: score 58.0, E = 5.7e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + f++++sHELRTPL ++ + +elL e+ + l++
AE015451_0 222 RERLFTSDVSHELRTPLMVLATSCELLMEN--------PGLDARA-- 258

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +e++ r++e +++L+ +L l+r++
AE015451_0 259 ----------RSQVERVARATEEMRELVKTFLMLARAQRD 288

AE015451_4445: domain 1 of 1, from 228 to 292: score 58.0, E = 5.7e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++l+++sHELR PL+ +r ++ l+++ + +eqr
AE015451_4 228 SQRQLLRDVSHELRSPLARLRIALALAER-----------AEPEQR- 262

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + ++ re +rl++Li+++L l+r +a+
AE015451_4 263 ----------QALWPRLTRECDRLEDLISEILALARVDAE 292

AE015451_3341: domain 1 of 1, from 200 to 262: score 57.5, E = 7.9e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ +l ++sHELR PLt + +++ l++ ++r
AE015451_3 200 AQQNLLHDISHELRSPLTRMHAAIGLMRQ-------------QPDR- 232

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++le+++re++r+++Li++lL+l+r+++
AE015451_3 233 ----------PDMLERVERESRRMDDLIEQLLTLARAQSR 262

AE015451_4316: domain 1 of 1, from 184 to 252: score 57.3, E = 8.9e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++a+l+H++RTPL+a ++ya L + +++ls+++r
AE015451_4 184 SLGRMVASLAHQIRTPLSAAMLYAGHLAD-------NEQALSAQTR- 222

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ t+++ ++ l+++++d+L ++r e +
AE015451_4 223 ----------QRFAATLKERLHELEHQVRDMLVFARGELP 252

AE015451_0267: domain 1 of 1, from 253 to 311: score 53.6, E = 9.7e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k fla++sH+LRTPLt +r+ +e L +
AE015451_0 253 DKAYFLAAVSHDLRTPLTRMRLRLERLPD------------------ 281

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e +++++ + +++++i ++Ld+ r++++
AE015451_0 282 ----------DEHRQRLQQNITQMDNMIGQVLDYLRAGEQ 311

AE015451_2638: domain 1 of 1, from 290 to 355: score 52.9, E = 1.6e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++fla++sH+L +PL+a r+++++Lle ++e+q++
AE015451_2 290 SKTKFLAAVSHDLLQPLNAARLFTSALLE-----------RDEPQNA 325

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++ + +++e ++L+ l d+s+++ag
AE015451_2 326 ----------AHLVRNVSNSLEDVENLLGTLVDISKLDAG 355

AE015451_3617: domain 1 of 1, from 361 to 427: score 52.5, E = 2.1e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt Ir ++ L++ ++l ee r
AE015451_3 361 AIGQLTGGVAHDFNNLLTIIRSSLHFLQR---------PNLAEERR- 397

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++yl+t+ + ++r +L +lL ++r +a
AE015451_3 398 ----------ERYLKTMSDTVDRGAKLTGQLLAFARRQAL 427

AE015451_2657: domain 1 of 1, from 206 to 271: score 51.8, E = 3.2e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++ la++sH+L +PL+a r+++++L+e +l+e +
AE015451_2 206 SKDKYLAAASHDLLQPLNAARLLISTLRE---------RPLPEAE-- 241

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++e+ ++++e ++L+ dlLd+sr+++
AE015451_2 242 ----------HVLVERTHQALEGAEDLLTDLLDISRLDQA 271

AE015451_1639: domain 1 of 1, from 233 to 292: score 50.1, E = 9.7e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++l++lsHE+RTPL+ +r +++ +
AE015451_1 233 MQQQLLRDLSHEMRTPLSRLRVACDGETD------------------ 261

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ ++++re++ +++L++d L+l++ +a+
AE015451_1 262 ---------LQRLRDRLIREVDCMQQLVEDTLQLAWQDAE 292

AE015451_4171: domain 1 of 1, from 224 to 288: score 49.6, E = 1.3e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++ +++HELR PLtaI+++++++++ + ++
AE015451_4 224 RERRLTDDAAHELRSPLTAIKTHLQVARM----------TDGAVR-- 258

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++le +++ ++r+ r +++lL l+r e
AE015451_4 259 ----------EQALEHAEQGTDRMHRTLEQLLMLARVEGS 288

AE015451_3718: domain 1 of 1, from 168 to 241: score 48.9, E = 2.2e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f++ +sHE RTPL+++++ ++l ++ l + + ++ s +++
AE015451_3 168 MRDDFMSIVSHEVRTPLNGLILETQLRKMHLAR--GNLDAFSVDKL- 211

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++e+ +r++++l rL++d+Ld sri++g
AE015451_3 212 ----------QAMVERDERQINSLIRLVEDMLDVSRIRTG 241

AE015451_3928: domain 1 of 1, from 150 to 216: score 48.2, E = 3.4e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ la l H+LR PL a++++ +l+l+ ++ s e++
AE015451_3 150 TRKMVLAVLGHDLRSPLGAVLMAGDLILR---------QDESGEKV- 186

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + + ++a+r ++++ndlLdl+r g
AE015451_3 187 ----------KLLAAQVCNSARRANNMVNDLLDLARCNLG 216

AE015451_0526: domain 1 of 1, from 232 to 291: score 46.7, E = 9.2e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +l++lsHELRTPL+ +r + + +l+++q+
AE015451_0 232 QQRLLLRTLSHELRTPLARLRIAHDS-------------DLPPPQL- 264

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+++re+ +++L+++ Ldl++++++
AE015451_0 265 -------------RERLDREVADMQKLLENTLDLAWMDTE 291

AE015451_3389: domain 2 of 2, from 272 to 336: score 44.3, E = 4.2e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e ++++H LR+PL++Ir ael+++ +e +
AE015451_3 272 ALGEVSSAVAHSLRNPLASIRSSAELAQA-----------FDEGPA- 306

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++ i+++++r+++ i+++L+ r +
AE015451_3 307 ----------QRQVNDIISQVDRMSQWIRQMLQSLRPLND 336

AE015451_2333: domain 1 of 1, from 427 to 495: score 43.6, E = 7e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++a+++H++++ Lt+I++ a+ L+++l ++++ +++
AE015451_2 427 AVGQLTAGVAHDFNNLLTVILTGASFLERDL-------AKADLDKA- 465

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r l i++++er +L ++lL +sr +
AE015451_2 466 ----------RTRLTHIREAGERGAKLTSQLLAFSRRQRL 495

AE015451_4634: domain 1 of 1, from 756 to 822: score 42.7, E = 1.3e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++a+++HE+ +P+t+I +a+ L+e + e + e +
AE015451_4 756 SIGRLAAGVAHEIGNPITGIACLAQNLRE--------EREDDGEII- 793

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ + il++++r +r+++ l+ ++ ++
AE015451_4 794 -----------ELSSQILDQTKRVSRIVQSLMSFAHAGGS 822

AE015451_3388: domain 1 of 1, from 272 to 336: score 41.8, E = 2.1e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e+ ++++H +R+PL+ Ir ael++e ++++
AE015451_3 272 ALGEMSSAVAHSMRNPLANIRSSAELAQE----------TANAAA-- 306

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + i+++++r++r ++dlL r +
AE015451_3 307 ----------QKNITDIISQVDRMSRWVRDLLVSLRPASD 336

AE015451_0261: domain 1 of 1, from 370 to 438: score 41.1, E = 3.5e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ + a++sHEL++PL+aIr yae ++ ld + ++e+
AE015451_0 370 VLGTMSASISHELNQPLAAIRSYAENAEILLD------HQRTEDA-- 408

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r l+ i + + r+ ++i l+ ++r +
AE015451_0 409 ----------RGNLKLIGELTGRMASIIAHLRAFARRDRH 438

AE015451_0245: domain 1 of 1, from 221 to 280: score 40.7, E = 4.6e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +la++sH+LRTPLt +r+ ++lL +
AE015451_0 221 ERELMLAGVSHDLRTPLTRLRLSLSLLNSD----------------- 250

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ + + r++e ++++++++L + r +
AE015451_0 251 ----------NELSDDMVRDIEDMDAILDQFLAFIRDGRD 280

AE015451_3398: domain 1 of 1, from 335 to 403: score 40.2, E = 6e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++ ++ HE+++ L++I g +elL+++l +e e +
AE015451_3 335 VVGQLAGGMGHEMNNLLSGIGGSLELLQRRL-------QEGRLERV- 373

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ y+++++++++r +L +l +sr +
AE015451_3 374 ----------EAYVDVARDSVQRAMDLTHRLIAFSRHQPL 403

AE015451_3512: domain 1 of 1, from 173 to 241: score 40.1, E = 6.8e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ L++I+g++el+ +l + + +++
AE015451_3 173 AVGQLTGGIAHDFNNLLASILGALELAGQRL------VQQRLADT-- 211

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++le ++ a+r +L+++lL +sr ++
AE015451_3 212 ----------TQLLELSRHNAQRAAALVQRLLAFSRQQTL 241

AE015451_3795: domain 1 of 1, from 153 to 218: score 36.6, E = 6.7e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++++ +l+H++++ Lt I+ a l+l+ t ++ +
AE015451_3 153 ALGQLTGGLAHDFNNMLTIIISSARLALA---------TQDPART-- 188

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l+ il++++r +L ++lL ++r +
AE015451_3 189 ----------QRMLQHILDASQRGTELTQQLLSFARHRKF 218

AE015451_3513: domain 1 of 1, from 315 to 383: score 35.5, E = 1.3e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +++ +++H++++ L +I+g+ el++ +l ++ r
AE015451_3 315 AVGQLSGGIAHDFNNLLGGILGAQELMRQRL-----------DQSRF 350

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++L + +le ++a+r ++L+ +lL +sr ++
AE015451_3 351 DAL-------APLLELSSSAAQRASSLVHRLLAFSRQQTL 383

AE015451_1058: domain 1 of 1, from 409 to 477: score 34.4, E = 2.8e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +++ +++HEL++PL+a+r+++ ++l + e++
AE015451_1 409 AIGQMSTSIAHELNQPLAALRTLSGNTVRFL-------ERGALETA- 447

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l+t+ + ++r+ r+ l+ ++r +
AE015451_1 448 ----------STNLRTMNDLIDRMGRITASLRSFARRGDD 477

AE015451_1339: domain 1 of 1, from 412 to 502: score 34.3, E = 3e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + ++a+++HE+++PL aI+ +++ ++++l +d +++ eq+
AE015451_1 412 SVGGLAAGMAHEINNPLGAILHNVQNIRRRL----SSDLPRNQEQAE 454

peLR.l.......edpeyreyletilreaerllrLindlLdlsrieag<-
+ +l + ++ +e+ ++l+ i++++ r +++ +L +sr +
AE015451_1 455 ELGIdLatinrylDSREVPQLLDGIQQAGARAAKIVTHMLSFSRRSNR 502

*

AE015451_1 - -

AE015451_1004: domain 1 of 1, from 282 to 325: score 33.9, E = 3.7e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s++++++sH+LRTP+t +r+ +elL++ + l ++
AE015451_1 282 ERSQLFSAISHDLRTPITRLRLRVELLED---------ERLQAKF-- 317

peLRledpeyreyletil<-*
+ l+ ++
AE015451_1 318 ----------SQDLDELE 325

AE015451_1391: domain 1 of 1, from 362 to 426: score 33.6, E = 4.5e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++++ a+++HE+++PLt+ r+ +e+L+ ld + + +e
AE015451_1 362 ALGQMSAAMAHEINQPLTTQRMQLETLRLLLD------HGRHDEA-- 400

peLRledpeyreyletilreaerllrLindlLdlsr<-*
r++le +++ + r+ +L + l +++r
AE015451_1 401 ----------RQALEPLEQMLTRMAALTSHLKTFAR 426

AE015451_3397: domain 1 of 1, from 171 to 239: score 32.9, E = 7.2e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+I+g el++++l ++ +s+
AE015451_3 171 AIGQLAGGVAHDFNNLLTSISGSFELIQRRL------RQGRSDGL-- 209

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l ++++ r rL +lL +s ++
AE015451_3 210 ----------DGVLCMGREAVSRAARLTHRLLAFSSRQSL 239

AE015451_2335: domain 1 of 1, from 532 to 600: score 32.0, E = 1.3e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f ++sH+LR PL I gy+elL e +++ +e
AE015451_2 532 ELEAFSYSVSHDLRAPLRHIAGYTELLGE-------IEGQGLSERG- 570

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l+ i ++a+ +L+++lL +s+++
AE015451_2 571 ----------KRFLQHIGEAAHFAGSLVDNLLNFSQMGRS 600

AE015451_1177: domain 1 of 1, from 238 to 300: score 31.2, E = 2.2e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++ l +l+H L+TPL++++g e L+ ++ +e
AE015451_1 238 RYRDSLDDLAHSLKTPLAVLQGVGESLQQRS-------GE------- 270

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re +++++++er++++i+ L+ + ++
AE015451_1 271 ----------REQARVLQSQIERMSQQIDYQLQRASLRKS 300

AE015451_3421: domain 1 of 1, from 212 to 276: score 29.5, E = 6.8e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++e+l ++sHELRTPLt + + + lL + e ++
AE015451_3 212 QQRELLNAVSHELRTPLTRLDFGLVLLFD----------EVPPAS-- 246

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l + ++ l++L+ +lL +sr+ +
AE015451_3 247 ----------RKRLLELVGHVRELDELVLELLSYSRLYNA 276

AE015451_3519: domain 1 of 1, from 241 to 314: score 28.2, E = 1.5e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++e++++++HE+++PL+a+ ya + +++l ++ + + + +r
AE015451_3 241 TLGELASGIAHEINQPLAAVVNYANASQRYL---QGLERDPQARERV 284

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + l++i ++a + + i++l+ + r +
AE015451_3 285 GQG----------LQRISEQATHAAEVIRRLRAFLRKGPR 314

AE015451_5173: domain 1 of 1, from 1461 to 1527: score 27.1, E = 3.2e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e+ a+++HE+ +PL +I +a + l++l ++++ + +
AE015451_5 1461 AMNELSASIAHEISQPLLGIASNAAASLRWLK------RAKPDLEEA 1501

peLRledpeyreyletilreaerllrLindlLdlsr<-*
++ le i++++er ++++ l+ l++
AE015451_5 1502 IAG----------LEDIRNDSERAGNIVRALRSLAK 1527


Histogram of all scores:
score obs exp (one = represents 18 sequences)
----- --- ---
-14 26 0|==
-13 65 4|*===
-12 197 122|======*====
-11 462 634|========================== *
-10 790 1176|============================================ *
-9 1021 1214|========================================================= *
-8 968 909|==================================================*===
-7 687 573|===============================*=======
-6 459 329|==================*=======
-5 269 181|==========*====
-4 150 96|=====*===
-3 76 51|==*==
-2 48 26|=*=
-1 33 14|*=
0 13 7|*
1 10 3|*
2 8 1|*
3 5 1|*
4 2 0|=
5 0 0|
6 1 0|=
7 0 0|
8 0 0|
9 1 0|=
> 10 59 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 457.9019
P(chi-square) = 0

Total sequences searched: 5350

Whole sequence top hits:
tophits_s report:
Total hits: 54
Satisfying E cutoff: 54
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 54
Satisfying E cutoff: 54
Total memory: 42K


Acknowledgements:

This research is funded by:

Developed by: