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Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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76 projects found  

1 accessions found for Chromobacterium violaceum ATCC 12472  

Data for AE016825  

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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: AE016825.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
AE016825_0882 CDS_909278-911986 105.8 1.3e-29 1
AE016825_1581 CDS_1703179-1705173 99.8 6.6e-28 1
AE016825_1951 CDS_2123468-2125156 94.6 2e-26 1
AE016825_2643 CDS_2857686-2853376 91.7 1.3e-25 1
AE016825_0473 CDS_495303-494464 90.0 3.9e-25 1
AE016825_1852 CDS_2008394-2006736 89.5 5.5e-25 1
AE016825_3248 CDS_3528413-3532855 88.4 1.1e-24 1
AE016825_2498 CDS_2691091-2688875 88.4 1.2e-24 1
AE016825_1621 CDS_1751569-1756815 88.1 1.4e-24 1
AE016825_3503 CDS_3799467-3803156 87.6 1.9e-24 1
AE016825_2213 CDS_2384617-2382413 86.1 5.1e-24 1
AE016825_0563 CDS_603309-604616 83.0 3.9e-23 1
AE016825_1190 CDS_1257604-1254287 81.7 8.7e-23 1
AE016825_2600 CDS_2810631-2807857 81.4 1.1e-22 1
AE016825_1579 CDS_1697388-1701092 79.7 3.4e-22 1
AE016825_1596 CDS_1722017-1719330 76.1 3.4e-21 1
AE016825_2400 CDS_2585502-2583139 72.7 3.1e-20 1
AE016825_1870 CDS_2027417-2030293 71.1 9e-20 1
AE016825_0074 CDS_86462-84906 70.2 1.6e-19 1
AE016825_0536 CDS_573647-575023 70.1 1.8e-19 1
AE016825_2634 CDS_2843832-2842588 58.7 3e-16 1
AE016825_3591 CDS_3899082-3900140 58.7 3e-16 1
AE016825_0892 CDS_919173-920519 56.3 1.4e-15 1
AE016825_0920 CDS_952811-955105 56.1 1.6e-15 1
AE016825_4218 CDS_4552722-4554125 50.7 5.3e-14 1
AE016825_0217 CDS_226899-228185 49.5 1.2e-13 1
AE016825_2324 CDS_2516261-2515008 49.5 1.2e-13 1
AE016825_4260 CDS_4595659-4593548 49.1 1.6e-13 1
AE016825_1718 CDS_1860046-1858361 45.5 1.6e-12 1
AE016825_3106 CDS_3394980-3393523 45.2 2e-12 1
AE016825_3445 CDS_3743019-3741874 44.6 2.8e-12 1
AE016825_3844 CDS_4148795-4150069 43.7 5.2e-12 1
AE016825_3089 CDS_3370210-3368966 43.1 7.9e-12 1
AE016825_0760 CDS_780792-779440 39.2 9.6e-11 1
AE016825_0594 CDS_630879-632282 33.6 3.7e-09 1
AE016825_3009 CDS_3286096-3284381 27.5 2e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
AE016825_0882 1/1 167 232 .. 1 87 [] 105.8 1.3e-29
AE016825_1581 1/1 28 93 .. 1 87 [] 99.8 6.6e-28
AE016825_1951 1/1 29 94 .. 1 87 [] 94.6 2e-26
AE016825_2643 1/1 810 875 .. 1 87 [] 91.7 1.3e-25
AE016825_0473 1/1 40 108 .. 1 87 [] 90.0 3.9e-25
AE016825_1852 1/1 46 111 .. 1 87 [] 89.5 5.5e-25
AE016825_3248 1/1 894 959 .. 1 87 [] 88.4 1.1e-24
AE016825_2498 1/1 14 79 .. 1 87 [] 88.4 1.2e-24
AE016825_1621 1/1 1026 1091 .. 1 87 [] 88.1 1.4e-24
AE016825_3503 1/1 504 569 .. 1 87 [] 87.6 1.9e-24
AE016825_2213 1/1 235 300 .. 1 87 [] 86.1 5.1e-24
AE016825_0563 1/1 205 272 .. 1 87 [] 83.0 3.9e-23
AE016825_1190 1/1 393 458 .. 1 87 [] 81.7 8.7e-23
AE016825_2600 1/1 396 461 .. 1 87 [] 81.4 1.1e-22
AE016825_1579 1/1 595 663 .. 1 87 [] 79.7 3.4e-22
AE016825_1596 1/1 667 733 .. 1 87 [] 76.1 3.4e-21
AE016825_2400 1/1 312 377 .. 1 87 [] 72.7 3.1e-20
AE016825_1870 1/1 508 573 .. 1 87 [] 71.1 9e-20
AE016825_0074 1/1 307 372 .. 1 87 [] 70.2 1.6e-19
AE016825_0536 1/1 232 297 .. 1 87 [] 70.1 1.8e-19
AE016825_2634 1/1 197 261 .. 1 87 [] 58.7 3e-16
AE016825_3591 1/1 129 195 .. 1 87 [] 58.7 3e-16
AE016825_0892 1/1 234 299 .. 1 87 [] 56.3 1.4e-15
AE016825_0920 1/1 538 608 .. 1 87 [] 56.1 1.6e-15
AE016825_4218 1/1 243 308 .. 1 87 [] 50.7 5.3e-14
AE016825_0217 1/1 214 272 .. 1 87 [] 49.5 1.2e-13
AE016825_2324 1/1 185 255 .. 1 87 [] 49.5 1.2e-13
AE016825_4260 1/1 485 557 .. 1 87 [] 49.1 1.6e-13
AE016825_1718 1/1 201 267 .. 1 87 [] 45.5 1.6e-12
AE016825_3106 1/1 271 329 .. 1 87 [] 45.2 2e-12
AE016825_3445 1/1 165 231 .. 1 87 [] 44.6 2.8e-12
AE016825_3844 1/1 211 272 .. 1 87 [] 43.7 5.2e-12
AE016825_3089 1/1 185 255 .. 1 87 [] 43.1 7.9e-12
AE016825_0760 1/1 228 293 .. 1 87 [] 39.2 9.6e-11
AE016825_0594 1/1 246 311 .. 1 87 [] 33.6 3.7e-09
AE016825_3009 1/1 225 291 .. 1 87 [] 27.5 2e-07

Alignments of top-scoring domains:
AE016825_0882: domain 1 of 1, from 167 to 232: score 105.8, E = 1.3e-29
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+flan+sHE+RTP++aI+g+a+l+l+ t l+++q
AE016825_0 167 AKSDFLANMSHEIRTPMNAIIGLAHLALR---------TGLDPKQ-- 202

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+yl++i++++++ll +ind+Ld+s+ieag
AE016825_0 203 ----------RDYLQKIHNSGKHLLGIINDILDFSKIEAG 232

AE016825_1581: domain 1 of 1, from 28 to 93: score 99.8, E = 6.6e-28
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aksefla +sHE+RTPL++++g+++lL++ t l++ q
AE016825_1 28 AKSEFLAVMSHEIRTPLNGVIGMTDLLQR---------TRLDDRQ-- 63

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r y+++++r++e ll++i+d+Ld+s+ieag
AE016825_1 64 ----------RHYVSVVHRSGEDLLAIISDILDFSKIEAG 93

AE016825_1951: domain 1 of 1, from 29 to 94: score 94.6, E = 2e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla++sHE+RTP+++++g++elL + t l++eq
AE016825_1 29 AKSAFLATMSHEIRTPMNGVLGMLELLAM---------TRLDAEQ-- 64

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + ti+++a+ llrLi+d+Ld+s+iea
AE016825_1 65 ----------SDTVATIQDSANTLLRLIDDILDFSKIEAD 94

AE016825_2643: domain 1 of 1, from 810 to 875: score 91.7, E = 1.3e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aksef+an+sHE+RTP+++++g++elL + t l+ q
AE016825_2 810 AKSEFVANMSHEIRTPMNGVLGMLELLSN---------TRLDGVQ-- 845

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r yl+ ++ + ++l +++nd+Ld+s++eag
AE016825_2 846 ----------RSYLDMLQLSCRSLMSILNDILDFSKLEAG 875

AE016825_0473: domain 1 of 1, from 40 to 108: score 90.0, E = 3.9e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+eflan+sHELRTPL+aI+g++e+ + ++ + l++ ++
AE016825_0 40 AKTEFLANMSHELRTPLHAILGFTEMGQLRS-------QSLDDAKL- 78

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y+ +i +++rll L+ndlLd++++e g
AE016825_0 79 ----------EQYFARINTSGNRLLTLLNDLLDMAKMEVG 108

AE016825_1852: domain 1 of 1, from 46 to 111: score 89.5, E = 5.5e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ fl ++sHE+RTP+++++g++elL++ + l+eeq
AE016825_1 46 AKTAFLTTISHEIRTPMNGVLGMLELLQM---------SRLDEEQ-- 81

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l t++++a+ llrLi+d+Ld+++iea
AE016825_1 82 ----------QDTLATARESAQLLLRLIDDILDFAKIEAD 111

AE016825_3248: domain 1 of 1, from 894 to 959: score 88.4, E = 1.1e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ f+an+sHE+RTP++aI+g++ lL + ls++q
AE016825_3 894 AKTAFVANMSHEIRTPMNAILGMVYLLSQ---------GRLSAQQ-- 929

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l+ti+r+a++ll+Lind+Ldls+++ g
AE016825_3 930 ----------QHQLDTIDRSARHLLNLINDILDLSKADVG 959

AE016825_2498: domain 1 of 1, from 14 to 79: score 88.4, E = 1.2e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks flan+sHE+RTP++aI+g++ l+l+ t+l+++q
AE016825_2 14 AKSLFLANMSHEIRTPMNAIIGMSYLALR---------TDLDDQQ-- 49

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r y+ +i++++ +ll +ind+Ld+s+ eag
AE016825_2 50 ----------RNYIGKIHNAGTSLLGIINDILDFSKVEAG 79

AE016825_1621: domain 1 of 1, from 1026 to 1091: score 88.1, E = 1.4e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+flan+sHE+RTP++a++g+++l++ t l+e q
AE016825_1 1026 VKSQFLANMSHEIRTPMNAVLGLLQLMQH---------TRLDERQ-- 1061

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+y+ +i+ +a++ll L+nd+Ld+s+i+ag
AE016825_1 1062 ----------LDYVGKIQAAAKSLLGLLNDILDFSKIDAG 1091

AE016825_3503: domain 1 of 1, from 504 to 569: score 87.6, E = 1.9e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHE+RTP++aI+g+++l++ t l++ q
AE016825_3 504 AKSEFLANMSHEIRTPMNAILGMLQLIQQ---------TGLNARQ-- 539

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y +++ ++a+ ll ++nd+Ld+sr e g
AE016825_3 540 ----------ADYADKASSAARTLLGILNDILDFSRVEVG 569

AE016825_2213: domain 1 of 1, from 235 to 300: score 86.1, E = 5.1e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks flan+sHE+RTPL++++g++ lL + ++ s+ q
AE016825_2 235 AKSAFLANMSHEIRTPLNGVLGMLALLAD---------SHPSASQ-- 270

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ y++t++++a++ll L+nd+Ld s++e+g
AE016825_2 271 ----------ANYIRTAEESARHLLLLLNDVLDASKLESG 300

AE016825_0563: domain 1 of 1, from 205 to 272: score 83.0, E = 3.9e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++f+an+sHELRTPLt++ g++e+L + +e +e ++
AE016825_0 205 VHRDFVANVSHELRTPLTVVGGFLETLSD--------MPEVDERTL- 242

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l + ++++r+++L++dlL+lsr+e+
AE016825_0 243 ----------RQFLPMMMEQSRRMQSLVEDLLTLSRLENS 272

AE016825_1190: domain 1 of 1, from 393 to 458: score 81.7, E = 8.7e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak fl+n+sHE+RTP++a++g+a lL++ + l++e
AE016825_1 393 AKANFLSNMSHEIRTPMNAVLGLAYLLEK---------HGLPAEA-- 428

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++i+ ++++l+++ind+Ld+s+ieag
AE016825_1 429 ----------LDLVHKIRVAGRSLQAIINDILDFSKIEAG 458

AE016825_2600: domain 1 of 1, from 396 to 461: score 81.4, E = 1.1e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+kse +a++sHE+RTPL+++ g+++lL++ ++l+ +q
AE016825_2 396 RKSEHIASISHEIRTPLNGVVGALSLLQR---------STLTLQQ-- 431

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+++t++ ++++ll +indlLd+s ieag
AE016825_2 432 ----------RELIDTARFSTDYLLIIINDLLDFSHIEAG 461

AE016825_1579: domain 1 of 1, from 595 to 663: score 79.7, E = 3.4e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHELRTPL++I+++++++ + d++ +e
AE016825_1 595 YKSEFLANMSHELRTPLNSIILLSKMMVN------NDDGAVKDEA-- 633

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++i+r++e llrLind+Ldls+ eag
AE016825_1 634 ----------LKWAQVIHRSGEDLLRLINDVLDLSKVEAG 663

AE016825_1596: domain 1 of 1, from 667 to 733: score 76.1, E = 3.4e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ l+ +sH+LRTPLt+++g+a +L + ++l++ +
AE016825_1 667 LRNSVLSVVSHDLRTPLTTMLGLANMLNA---------PTLPPGRQ- 703

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ ++i++ea r+ +L+ +lLd++++++g
AE016825_1 704 ----------SEIAQSIQDEAIRMTKLVTNLLDMAKLQSG 733

AE016825_2400: domain 1 of 1, from 312 to 377: score 72.7, E = 3.1e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks fla++sHE+RTPL+a+++ +elL+ + l++ +
AE016825_2 312 EKSMFLAMMSHEIRTPLNAVLASVELLRG---------SMLPPRE-- 347

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re++ + +a ll+L++++Ld+++++a
AE016825_2 348 ----------RELVALANASAVNLLELLDNVLDIAKLDAH 377

AE016825_1870: domain 1 of 1, from 508 to 573: score 71.1, E = 9e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++fla++ HE RTP+t+++g++ lL+ ++l++eq
AE016825_1 508 NKTDFLAAIGHEVRTPMTGVLGALNLLKH---------SALTSEQ-- 543

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l+++ r++e l+ +n+lLd+s++e+g
AE016825_1 544 ----------KRQLDIAARSTELLQGKLNELLDFSKLESG 573

AE016825_0074: domain 1 of 1, from 307 to 372: score 70.2, E = 1.6e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++++an++HE+R+PL+aIr +a+lL e +e ++
AE016825_0 307 ALGRLTANIAHEIRNPLSAIRHAADLLAE---------DEEDPAR-- 342

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l ++++ ++r++ +++d+L+l r +
AE016825_0 343 ----------RRLLGIVQDNTRRINGMVEDVLTLGRRDRV 372

AE016825_0536: domain 1 of 1, from 232 to 297: score 70.1, E = 1.8e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+s +l+++sHE+ TPL++I+g +elL + + +++
AE016825_0 232 ARSTMLSTVSHEILTPLHTIQGGVELLSD---------QIADPRA-- 267

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + ++ +a++l++L +dlLd+ r++ag
AE016825_0 268 ----------QRTIANVRTAADYLSKLMQDLLDMGRLDAG 297

AE016825_2634: domain 1 of 1, from 197 to 261: score 58.7, E = 3e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++ +++HELRTPLt+I++++++++ ++e
AE016825_2 197 RERRLACDAAHELRTPLTVIKTHLQVAQI----------VGDAEA-- 231

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l +l+ + rl+r ++++L+l+r+++g
AE016825_2 232 ----------RRALGHALEGTSRLQRVLEQMLTLARLDEG 261

AE016825_3591: domain 1 of 1, from 129 to 195: score 58.7, E = 3e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +e+++nl+HE+++PL +Irg+a+lL+ el ++++e +
AE016825_3 129 ANRELIRNLAHEIKNPLGGIRGAAQLLEHEL-------ADRPELK-- 166

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
ey+e+i +ea rl+ L+++lL r +
AE016825_3 167 -----------EYTEVITEEALRLQTLVDRLLAPHRSHNR 195

AE016825_0892: domain 1 of 1, from 234 to 299: score 56.3, E = 1.4e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++f+a+++HELRTPL+a+r ae+L t+
AE016825_0 234 HERRFTADAAHELRTPLAALRVQAEVLAL---------TPDEGGR-- 269

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +l+ ++ + r rL+++lL lsr++
AE016825_0 270 ----------RHALSQLQLGIARAGRLVEQLLALSRLDPL 299

AE016825_0920: domain 1 of 1, from 538 to 608: score 56.1, E = 1.6e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e++++l+HEL++PLtaI +ya + l+ee +l
AE016825_0 538 AMGEMASTLAHELNQPLTAIHTYAAGVSR----------RLPEELAL 574

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
p++ +r++++ i ++++r ++++ ++ + + ++
AE016825_0 575 PAG------VRDAIHAIAEQSRRAAQIVSSIRAFVKKHEP 608

AE016825_4218: domain 1 of 1, from 243 to 308: score 50.7, E = 5.3e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++f++ +sHEL+TPL++I +a lL+e++ ++l+++q
AE016825_4 243 QKTRFFRQVSHELKTPLASIHEAAALLREQVA------GPLNPQQ-- 281

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +++++ + a+ l++ ++ l r +ag
AE016825_4 282 ----------RHIVDILGNNAQTLRQRVEAL---LRQDAG 308

AE016825_0217: domain 1 of 1, from 214 to 272: score 49.5, E = 1.2e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +la+lsH+LRTPLt +++++e+ +e+s +q
AE016825_0 214 ERRLMLAGLSHDLRTPLTRLKLTLEM------------QEASTDQ-- 246

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l++++ l+r+++++ d++r+e+
AE016825_0 247 --------------HDMLSDIDELSRIVRQFIDFARAEET 272

AE016825_2324: domain 1 of 1, from 185 to 255: score 49.5, E = 1.2e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++e++++++HE+++PL+aI+ y+++ l l++d+el+ +
AE016825_2 185 TMGEMASGIAHEINQPLSAIMSYCQAGLS-----LLEDDELDMAML- 225

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l + ++a+r r+i +l+++ ++
AE016825_2 226 ----------RRALTSSVSQADRAGRIIHRLREFVTQKNQ 255

AE016825_4260: domain 1 of 1, from 485 to 557: score 49.1, E = 1.6e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +e + l+HE+R+PLt I++ ae L ++l +++ e +
AE016825_4 485 AWGEVAKRLAHEIRNPLTPIQLSAERLAMKL-------ADKLEGPDA 524

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++L ++ ++ti++++ l ++++ ++d++r+
AE016825_4 525 DML-------KRSTDTIIKQVGALKSMVEAFRDYARAPKI 557

AE016825_1718: domain 1 of 1, from 201 to 267: score 45.5, E = 1.6e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ fla++sHE+R PL +I++ +elL+ + ++
AE016825_1 201 ARDTFLATISHEIRSPLQSIQTCTELLEY---------SIPPDNPG- 237

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yl++++++ +ll++++d++d+s + +
AE016825_1 238 ----------YGYLSRLKQSNAYLLAQVRDIMDISALKNH 267

AE016825_3106: domain 1 of 1, from 271 to 329: score 45.2, E = 2e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+s++la++sH+LR P+t +r+ +e L+e
AE016825_3 271 TRSQMLAGVSHDLRLPITRVRLRLEQLEE------------------ 299

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + i+r++ +++Li d L + r+++g
AE016825_3 300 ----------GSARQAIERDLSEMDQLIGDTLAYLRMGQG 329

AE016825_3445: domain 1 of 1, from 165 to 231: score 44.6, E = 2.8e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++a+l+H+LRTPL++ ++y+ L+ d +++e+
AE016825_3 165 SMGSMAAALAHQLRTPLASAMLYTANLKQ--------DIPRPEDR-- 201

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++++ l + l+ Li+++L + r +
AE016825_3 202 ----------ARFVDKSLARMRALEGLIQNMLGFVRGQVS 231

AE016825_3844: domain 1 of 1, from 211 to 272: score 43.7, E = 5.2e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k ++ +++HELRTPL+ +r + lL+ +e ++e
AE016825_3 211 SKKTLTNAVAHELRTPLARLRYRLALLEG---------DEDTPER-- 246

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ i+r++ +++L+++lL +r++ +
AE016825_3 247 --------------QAIERDLTAIDKLVEELLFHARLDRP 272

AE016825_3089: domain 1 of 1, from 185 to 255: score 43.1, E = 7.9e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++e++++++HEL++PLtaI+ y++++ l g ++++++
AE016825_3 185 TMGEMASGIAHELNQPLTAISNYCQAAMQ----MLEGVDDAPPQV-- 225

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l+ + +a r ++i +l+ l +a
AE016825_3 226 ----------HSALKLAVAQAGRAGEIIKRLRALVSKRAI 255

AE016825_0760: domain 1 of 1, from 228 to 293: score 39.2, E = 9.6e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ + +++HE+RTP++ +r+ + +L+e e ++ +
AE016825_0 228 TRQALSHAIAHEIRTPIARLRFGLTMLEE----------EEDPIE-- 262

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++y + ++r+ l++Li+ +++++++
AE016825_0 263 ---------WKRYRDGMERDMVELEELISTSMEFAKLRRS 293

AE016825_0594: domain 1 of 1, from 246 to 311: score 33.6, E = 3.7e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + + +++HE+ TPL++I++ a++L + e+++e r
AE016825_0 246 RERAIVQDAAHEMCTPLAVISTQAHALVR----------EADAEAR- 281

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l +++++ r ++L+++lL l+ +e g
AE016825_0 282 ----------QQNLAALEQALARHSHLVQQLLRLAALERG 311

AE016825_3009: domain 1 of 1, from 225 to 291: score 27.5, E = 2e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ fl +l HE+R PL ++++ el + + ++ + +
AE016825_3 225 DRTTFLGTLGHEIRSPLQSMQMCMELVEP---------AVMPQPAA- 261

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l++++ +l +++ d++d+s i +
AE016825_3 262 ----------QLALKRMKAGMAQLTSQVHDIMDISAIKNM 291


Histogram of all scores:
score obs exp (one = represents 15 sequences)
----- --- ---
-14 10 0|=
-13 52 3|*===
-12 168 100|======*=====
-11 385 522|========================== *
-10 653 969|============================================ *
-9 844 1000|========================================================= *
-8 773 749|=================================================*==
-7 607 472|===============================*=========
-6 361 271|==================*======
-5 223 149|=========*=====
-4 129 79|=====*===
-3 67 42|==*==
-2 41 22|=*=
-1 21 11|*=
0 19 6|*=
1 6 3|*
2 4 1|*
3 0 0|
4 2 0|=
> 5 42 -|===


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 410.6740
P(chi-square) = 0

Total sequences searched: 4407

Whole sequence top hits:
tophits_s report:
Total hits: 36
Satisfying E cutoff: 36
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 36
Satisfying E cutoff: 36
Total memory: 35K


Acknowledgements:

This research is funded by:

Developed by: