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Thermotogae
Classification of phyla is from NCBI page
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264 projects found  

2 accessions found for Pseudomonas fluorescens SBW25  

Data for AM181176  

Available Atlases
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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: AM181176.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
AM181176_3692 CDS_4172520-4175273 101.7 2.7e-28 1
AM181176_3057 CDS_3418045-3419439 98.1 2.7e-27 1
AM181176_0592 CDS_693639-690811 93.2 6.9e-26 1
AM181176_1796 CDS_2005731-2003830 92.8 8.6e-26 1
AM181176_1695 CDS_1903949-1901601 87.2 3.5e-24 1
AM181176_1567 CDS_1760673-1763642 83.7 3.3e-23 1
AM181176_1565 CDS_1756586-1759408 83.3 4.2e-23 1
AM181176_1698 CDS_1909117-1905470 81.8 1.1e-22 1
AM181176_5912 CDS_6606385-6607707 81.7 1.2e-22 1
AM181176_2865 CDS_3206151-3203836 81.0 1.9e-22 1
AM181176_2214 CDS_2458030-2461761 79.6 4.7e-22 1
AM181176_2947 CDS_3285248-3288802 76.8 3e-21 1
AM181176_1535 CDS_1729389-1728043 74.9 1e-20 1
AM181176_2131 CDS_2363706-2367326 71.6 8.8e-20 1
AM181176_1639 CDS_1842783-1845434 71.1 1.2e-19 1
AM181176_3475 CDS_3941805-3942947 69.8 2.8e-19 1
AM181176_0087 CDS_89501-87714 69.6 3.2e-19 1
AM181176_5005 CDS_5617220-5619463 67.7 1.1e-18 1
AM181176_5281 CDS_5931659-5929269 67.7 1.2e-18 1
AM181176_0334 CDS_376727-375642 66.6 2.3e-18 1
AM181176_4619 CDS_5201383-5199773 66.3 2.7e-18 1
AM181176_0936 CDS_1065946-1064582 66.2 3.1e-18 1
AM181176_4195 CDS_4730256-4729237 65.3 5.5e-18 1
AM181176_1417 CDS_1600578-1601963 63.9 1.3e-17 1
AM181176_3056 CDS_3416340-3417707 63.5 1.7e-17 1
AM181176_5521 CDS_6181441-6180002 62.7 3e-17 1
AM181176_4033 CDS_4562588-4563973 61.7 5.7e-17 1
AM181176_1106 CDS_1263875-1265644 61.7 5.8e-17 1
AM181176_4684 CDS_5271531-5272703 61.2 8.1e-17 1
AM181176_2196 CDS_2439557-2441164 58.8 3.7e-16 1
AM181176_4868 CDS_5473887-5472607 58.3 5e-16 1
AM181176_0681 CDS_803503-802067 58.2 5.4e-16 1
AM181176_4771 CDS_5362174-5363517 57.6 8e-16 1
AM181176_4089 CDS_4608322-4609728 56.2 2.1e-15 1
AM181176_3372 CDS_3817575-3818699 54.8 5.2e-15 1
AM181176_4014 CDS_4537960-4536677 53.5 1.2e-14 1
AM181176_4377 CDS_4937569-4941039 53.3 1.4e-14 1
AM181176_4995 CDS_5609867-5608515 53.2 1.4e-14 1
AM181176_4348 CDS_4906812-4905598 52.6 2.1e-14 1
AM181176_2193 CDS_2437172-2435565 50.1 1.1e-13 1
AM181176_3006 CDS_3356370-3357446 48.8 2.5e-13 1
AM181176_2655 CDS_3007109-3008410 48.7 2.7e-13 1
AM181176_4288 CDS_4830907-4829585 48.1 4.1e-13 1
AM181176_3405 CDS_3853763-3852486 47.9 4.5e-13 1
AM181176_2696 CDS_3059921-3057741 47.2 7.4e-13 1
AM181176_0279 CDS_313020-311212 44.1 5.6e-12 1
AM181176_3562 CDS_4031312-4032631 43.9 6.2e-12 1
AM181176_2950 CDS_3290229-3291422 43.7 7e-12 2
AM181176_0253 CDS_286433-287746 42.9 1.2e-11 1
AM181176_2953 CDS_3298117-3296447 40.8 4.9e-11 1
AM181176_5120 CDS_5742463-5745417 39.5 1.1e-10 1
AM181176_2561 CDS_2894384-2891889 39.5 1.1e-10 1
AM181176_3521 CDS_3993348-3991636 36.4 8.1e-10 1
AM181176_1110 CDS_1270750-1268846 36.2 9.6e-10 1
AM181176_4846 CDS_5444619-5443192 34.9 2.3e-09 1
AM181176_0618 CDS_729190-726452 34.0 4e-09 1
AM181176_4814 CDS_5405889-5407925 32.9 8.4e-09 1
AM181176_1808 CDS_2017915-2016875 32.0 1.5e-08 1
AM181176_1086 CDS_1240113-1238734 28.4 1.5e-07 2
AM181176_5337 CDS_5987381-5986062 28.0 2e-07 1
AM181176_2451 CDS_2728429-2727116 27.5 2.7e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
AM181176_3692 1/1 284 349 .. 1 87 [] 101.7 2.7e-28
AM181176_3057 1/1 205 273 .. 1 87 [] 98.1 2.7e-27
AM181176_0592 1/1 417 482 .. 1 87 [] 93.2 6.9e-26
AM181176_1796 1/1 264 329 .. 1 87 [] 92.8 8.6e-26
AM181176_1695 1/1 299 364 .. 1 87 [] 87.2 3.5e-24
AM181176_1567 1/1 504 569 .. 1 87 [] 83.7 3.3e-23
AM181176_1565 1/1 459 524 .. 1 87 [] 83.3 4.2e-23
AM181176_1698 1/1 721 787 .. 1 87 [] 81.8 1.1e-22
AM181176_5912 1/1 205 272 .. 1 87 [] 81.7 1.2e-22
AM181176_2865 1/1 400 464 .. 1 87 [] 81.0 1.9e-22
AM181176_2214 1/1 552 618 .. 1 87 [] 79.6 4.7e-22
AM181176_2947 1/1 512 580 .. 1 87 [] 76.8 3e-21
AM181176_1535 1/1 230 296 .. 1 87 [] 74.9 1e-20
AM181176_2131 1/1 714 780 .. 1 87 [] 71.6 8.8e-20
AM181176_1639 1/1 651 719 .. 1 87 [] 71.1 1.2e-19
AM181176_3475 1/1 161 226 .. 1 87 [] 69.8 2.8e-19
AM181176_0087 1/1 375 443 .. 1 87 [] 69.6 3.2e-19
AM181176_5005 1/1 517 588 .. 1 87 [] 67.7 1.1e-18
AM181176_5281 1/1 418 483 .. 1 87 [] 67.7 1.2e-18
AM181176_0334 1/1 132 197 .. 1 87 [] 66.6 2.3e-18
AM181176_4619 1/1 308 373 .. 1 87 [] 66.3 2.7e-18
AM181176_0936 1/1 236 302 .. 1 87 [] 66.2 3.1e-18
AM181176_4195 1/1 116 180 .. 1 87 [] 65.3 5.5e-18
AM181176_1417 1/1 244 309 .. 1 87 [] 63.9 1.3e-17
AM181176_3056 1/1 238 303 .. 1 87 [] 63.5 1.7e-17
AM181176_5521 1/1 255 320 .. 1 87 [] 62.7 3e-17
AM181176_4033 1/1 239 303 .. 1 87 [] 61.7 5.7e-17
AM181176_1106 1/1 366 432 .. 1 87 [] 61.7 5.8e-17
AM181176_4684 1/1 172 237 .. 1 87 [] 61.2 8.1e-17
AM181176_2196 1/1 180 245 .. 1 87 [] 58.8 3.7e-16
AM181176_4868 1/1 211 277 .. 1 87 [] 58.3 5e-16
AM181176_0681 1/1 241 307 .. 1 87 [] 58.2 5.4e-16
AM181176_4771 1/1 227 291 .. 1 87 [] 57.6 8e-16
AM181176_4089 1/1 245 311 .. 1 87 [] 56.2 2.1e-15
AM181176_3372 1/1 150 216 .. 1 87 [] 54.8 5.2e-15
AM181176_4014 1/1 201 263 .. 1 87 [] 53.5 1.2e-14
AM181176_4377 1/1 796 863 .. 1 87 [] 53.3 1.4e-14
AM181176_4995 1/1 238 303 .. 1 87 [] 53.2 1.4e-14
AM181176_4348 1/1 186 252 .. 1 87 [] 52.6 2.1e-14
AM181176_2193 1/1 177 242 .. 1 87 [] 50.1 1.1e-13
AM181176_3006 1/1 136 200 .. 1 87 [] 48.8 2.5e-13
AM181176_2655 1/1 212 277 .. 1 87 [] 48.7 2.7e-13
AM181176_4288 1/1 225 289 .. 1 87 [] 48.1 4.1e-13
AM181176_3405 1/1 205 270 .. 1 87 [] 47.9 4.5e-13
AM181176_2696 1/1 361 427 .. 1 87 [] 47.2 7.4e-13
AM181176_0279 1/1 368 436 .. 1 87 [] 44.1 5.6e-12
AM181176_3562 1/1 236 294 .. 1 87 [] 43.9 6.2e-12
AM181176_0253 1/1 221 280 .. 1 87 [] 42.9 1.2e-11
AM181176_2950 2/2 168 241 .. 1 87 [] 42.9 1.2e-11
AM181176_2953 1/1 185 253 .. 1 87 [] 40.8 4.9e-11
AM181176_5120 1/1 756 822 .. 1 87 [] 39.5 1.1e-10
AM181176_2561 1/1 457 525 .. 1 87 [] 39.5 1.1e-10
AM181176_3521 1/1 198 264 .. 1 87 [] 36.4 8.1e-10
AM181176_1110 1/1 410 478 .. 1 87 [] 36.2 9.6e-10
AM181176_4846 1/1 270 313 .. 1 65 [. 34.9 2.3e-09
AM181176_0618 1/1 682 752 .. 1 87 [] 34.0 4e-09
AM181176_4814 1/1 412 502 .. 1 87 [] 32.9 8.4e-09
AM181176_1808 1/1 142 185 .. 1 65 [. 32.0 1.5e-08
AM181176_5337 1/1 205 271 .. 1 87 [] 28.0 2e-07
AM181176_2451 1/1 203 269 .. 1 87 [] 27.5 2.7e-07

Alignments of top-scoring domains:
AM181176_3692: domain 1 of 1, from 284 to 349: score 101.7, E = 2.7e-28
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHE+RTPL++I+g+++lL++ +el++ q
AM181176_3 284 IKSEFLANMSHEIRTPLNGILGFTHLLQK---------SELTPRQ-- 319

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+yl ti+++a+ ll +in++Ld+s+ieag
AM181176_3 320 ----------LDYLGTIEKSADNLLGIINEILDFSKIEAG 349

AM181176_3057: domain 1 of 1, from 205 to 273: score 98.1, E = 2.7e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ksefla++sHELRTPL+a++g++e+L+++l +e+s+ q
AM181176_3 205 MKSEFLATMSHELRTPLNAVIGFSEALKDGL------VGEMSDTQ-- 243

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
rey+ i ++++ll+Lind+Ldls+ eag
AM181176_3 244 ----------REYIGDIFTSGQHLLSLINDILDLSKVEAG 273

AM181176_0592: domain 1 of 1, from 417 to 482: score 93.2, E = 6.9e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak efla +sHE+RTP+++++g++elLl t+ls +q
AM181176_0 417 AKAEFLAKISHEIRTPMNGVLGMTELLLG---------TPLSVKQ-- 452

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+y++ti+++++ ll Lin++Ld+s++e+g
AM181176_0 453 ----------RDYVQTIHSAGNELLTLINEILDISKLESG 482

AM181176_1796: domain 1 of 1, from 264 to 329: score 92.8, E = 8.6e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHELRTP+++++g+++l+++ te++eeq
AM181176_1 264 AKSDFLAMMSHELRTPMNGVLGMLQLMET---------TEMTEEQ-- 299

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
ey + +++e+ll+ ind+Ld+srie
AM181176_1 300 ----------SEYAALASESTEHLLKVINDILDFSRIERA 329

AM181176_1695: domain 1 of 1, from 299 to 364: score 87.2, E = 3.5e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+ flan+sHE+RTPL++++g++ l l+ ++l++eq
AM181176_1 299 ARAAFLANMSHEIRTPLNGLLGMIALSLD---------SPLNAEQ-- 334

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l++++++++ l +L+nd+Ldls+ +ag
AM181176_1 335 ----------RQQLSIAHDSGKVLVELLNDILDLSKFDAG 364

AM181176_1567: domain 1 of 1, from 504 to 569: score 83.7, E = 3.3e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ fla++sHE+RTPL +++g++el+ t++se q
AM181176_1 504 AKTVFLATMSHEIRTPLYGVLGNLELMAL---------TDMSERQ-- 539

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+yle+i+ ++ l +Li+++Ld s+ie+g
AM181176_1 540 ----------RQYLEIIQGSSTVLFQLISNVLDVSKIESG 569

AM181176_1565: domain 1 of 1, from 459 to 524: score 83.3, E = 4.2e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ fla++sHE+RTPL +++g++elL + t+l+++q
AM181176_1 459 AKTLFLATMSHEIRTPLYGVLGTLELLAR---------TDLNSQQ-- 494

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r yl+ i+ ++ ll+Li d+Ld s+ieag
AM181176_1 495 ----------RGYLNAIEGSSANLLQLICDVLDVSKIEAG 524

AM181176_1698: domain 1 of 1, from 721 to 787: score 81.8, E = 1.1e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla++sHE+RTP++a++g++el l+ +++++ +
AM181176_1 721 AKSTFLATMSHEIRTPMNAVIGMLELTLK--------RADQGHLD-- 757

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r ++e+++++a+ ll+Li d+Ld++rie+g
AM181176_1 758 ----------RPAIEVAYNSAKDLLELIGDILDIARIESG 787

AM181176_5912: domain 1 of 1, from 205 to 272: score 81.7, E = 1.2e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+an+sHELRTPLt+I gy+e+Ll+++ +e ++
AM181176_5 205 MRKDFVANVSHELRTPLTVICGYLETLLDNV-------DEINPRW-- 242

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l+ +++++ r++ L+ndlL l+++ea
AM181176_5 243 ----------SRALQQMQQQGSRMQTLLNDLLLLAKLEAT 272

AM181176_2865: domain 1 of 1, from 400 to 464: score 81.0, E = 1.9e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aksefl+ +sHELRTPL++I+g+a+lL + + q
AM181176_2 400 AKSEFLSRMSHELRTPLNSILGFAQLLDM----------DSAGGQ-- 434

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + ilr++++ll Lin++Ld+++ieag
AM181176_2 435 ----------KAHVGHILRAGQHLLTLINEVLDIAKIEAG 464

AM181176_2214: domain 1 of 1, from 552 to 618: score 79.6, E = 4.7e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+f+a++sHELRTPLt I++ +e L + ++l++ +
AM181176_2 552 AKSDFVATVSHELRTPLTLILAPLEQLSA---------ATLPPAD-- 587

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+r +++++r a rl + +nd+Ld+s++eag
AM181176_2 588 ---------WRVQIDRAQRNALRLMNRVNDILDFSKAEAG 618

AM181176_2947: domain 1 of 1, from 512 to 580: score 76.8, E = 3e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHELRTPL++ + +a+lL e ++ls+eq
AM181176_2 512 YKSEFLANMSHELRTPLNSSLILAKLLAE------NPQENLSAEQ-- 550

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ e+i+++++ ll+Lind+Ld+s+ eag
AM181176_2 551 ----------VKFAESIYSAGNDLLNLINDILDISKVEAG 580

AM181176_1535: domain 1 of 1, from 230 to 296: score 74.9, E = 1e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s f a+++HELRTPL+ +++ ++++l+ ++++ e+
AM181176_1 230 RLSAFSADIAHELRTPLSNLLTQTQVILT---------QPRPLED-- 265

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yre+l++ l+e++ + +L+nd+L l+++++g
AM181176_1 266 ---------YREALHSNLEELQWMAQLVNDMLYLAKADHG 296

AM181176_2131: domain 1 of 1, from 714 to 780: score 71.6, E = 8.8e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ fla++sHE+RTP++a++g++el+++++ e++ +
AM181176_2 714 AKTTFLATMSHEIRTPMNAVIGMIELAQKNA--------EQGRVD-- 750

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++le++ +++++l+Li d+Ld++rie+g
AM181176_2 751 ----------QDALEVASMASRSMLELIGDILDIARIETG 780

AM181176_1639: domain 1 of 1, from 651 to 719: score 71.1, E = 1.2e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+s +la++sH+LRTPLt++rg ++ Ll+ + ++ + e+r
AM181176_1 651 LRSALLASVSHDLRTPLTSMRGSIDSLLALG-------EAIPLEDR- 689

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+le ++eaerl+r i++lLd++r+++g
AM181176_1 690 ----------RELLEGTRDEAERLDRYIQNLLDMTRLGHG 719

AM181176_3475: domain 1 of 1, from 161 to 226: score 69.8, E = 2.8e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++a +sH+L++PLtaIr++++ L + +e+++++
AM181176_3 161 FAEQMVAIVSHDLKNPLTAIRMASDFLSR---------GERTPKE-- 196

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l i +++er +r+i dlLd+++++ g
AM181176_3 197 ----------QQLLGHIGQSSERAQRMIADLLDFTQARVG 226

AM181176_0087: domain 1 of 1, from 375 to 443: score 69.6, E = 3.2e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+sef+ +sHELRTP+t++ ++ l +e +++ +++ r
AM181176_0 375 VRSEFVLRASHELRTPVTGMHMAFGLFRE--------RAKFPPDSRE 413

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l+t+ +e +rl +LindlL +sr ++g
AM181176_0 414 ----------ADLLDTVNEEMQRLMQLINDLLNFSRYQNG 443

AM181176_5005: domain 1 of 1, from 517 to 588: score 67.7, E = 1.1e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e++a +sH+LR+P+t+I++++ ++++ a +++ + r+
AM181176_5 517 ARDELVAVVSHDLRNPMTVISMLCGMMQK------AFSSDGPHTSRR 557

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++t++++a r++ L++dlLd s+ieag
AM181176_5 558 ---------ISSAIDTMQQAAARMNVLLEDLLDTSKIEAG 588

AM181176_5281: domain 1 of 1, from 418 to 483: score 67.7, E = 1.2e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+efla+l HELRTP+++++g +el+++ +l+++
AM181176_5 418 LKDEFLATLTHELRTPMNGVIGSLELMQT---------VPLDADL-- 453

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y +t+ +a+ + r++n +L+l+ ++ag
AM181176_5 454 ----------AQYQQTAAGSARDMMRMVNGILTLTELQAG 483

AM181176_0334: domain 1 of 1, from 132 to 197: score 66.6, E = 2.3e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++l+HE+++PL +Irg+a+lL + el+ee++
AM181176_0 132 TSKMLVRGLAHEIKNPLGGIRGAAQLLAR----------ELPEEHL- 167

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y+++i++ea+rl++L++++L ++ +
AM181176_0 168 ----------KDYTNVIIEEADRLRNLVDRMLGSNKLPSL 197

AM181176_4619: domain 1 of 1, from 308 to 373: score 66.3, E = 2.7e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++e+++++sHELRTP++ +r+ +e+ + + ++e r
AM181176_4 308 IQRELVRAVSHELRTPVARLRFGLEMVGD----------ATTPEAR- 343

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+yle ++++++ l+ L++++L+++r+e+g
AM181176_4 344 ----------RKYLEGMDSDIQDLDGLVDEMLTYARLEQG 373

AM181176_0936: domain 1 of 1, from 236 to 302: score 66.2, E = 3.1e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f a+++HELR PLt ++g ++++l+ +s+e+
AM181176_0 236 RLESFNADVAHELRSPLTNLIGQTQVALT---------RGRSAEH-- 271

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y e l++ l+e+erl+++ind+L l+ +++g
AM181176_0 272 ---------YFEVLQSNLEELERLRSIINDMLFLASADQG 302

AM181176_4195: domain 1 of 1, from 116 to 180: score 65.3, E = 5.5e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ la+++HELR+PLt I++ ae + + l+++q+
AM181176_4 116 QQKSILAMVAHELRNPLTPISLIAERMVR-----------LPSDQL- 150

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ e i+ +++++++L++dlLd sr+ +g
AM181176_4 151 ----------PRMRELIEGQVQHISQLVDDLLDVSRASTG 180

AM181176_1417: domain 1 of 1, from 244 to 309: score 63.9, E = 1.3e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+a+++HELRTPL+a+++ +el l+ + + +
AM181176_1 244 RQAQFIADAAHELRTPLAALKARLELGLR----------AEEPAT-- 278

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+r let+ + ++rl +L n+lL l+rie+g
AM181176_1 279 ---------WRSTLETAAQGTDRLTHLANQLLSLARIENG 309

AM181176_3056: domain 1 of 1, from 238 to 303: score 63.5, E = 1.7e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++f+a+++HE+RTPL+++r +a+ Lle + ++ +r
AM181176_3 238 RERRFIADAAHEMRTPLAVLRVHAQNLLE----------AGTDTER- 273

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re l ++ ++r rL+n+lL+++r+e
AM181176_3 274 ----------RESLAFLITGVDRTTRLVNQLLTMARLEPS 303

AM181176_5521: domain 1 of 1, from 255 to 320: score 62.7, E = 3e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + +l HEL+ PL+aIrg+aelL+ +++ eq+
AM181176_5 255 YVEHYVHTLTHELKSPLAAIRGAAELLQG----------DMTREQQ- 290

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++ i++e+ rl++Li++lL l++ e+
AM181176_5 291 ----------QRFVGNIDSESARLQQLIERLLNLAQVEQR 320

AM181176_4033: domain 1 of 1, from 239 to 303: score 61.7, E = 5.7e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ef+a++sHELRTPL+++rg +e++++ + ++ +q
AM181176_4 239 MRREFMADVSHELRTPLSVLRGELEAIED---------GVRTLDQ-- 274

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++ e+ l++L++dl dls ++ g
AM181176_4 275 -----------GSMKSLQGEVSMLSKLVDDLYDLSLADVG 303

AM181176_1106: domain 1 of 1, from 366 to 432: score 61.7, E = 5.8e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e + +l+HE+R+PL I+++++lL + +++l + +
AM181176_1 366 ALGEVAMGLAHEIRNPLGIIKTATQLLHR--------RADLADTD-- 402

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ le +++e+ r+++Li ++Ld+++ +
AM181176_1 403 ----------KRHLEYVISEVSRINDLITEFLDFAKPNPP 432

AM181176_4684: domain 1 of 1, from 172 to 237: score 61.2, E = 8.1e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+a l H+LR+PL aI + ae Ll+ + +++ +
AM181176_4 172 LREQFIAVLGHDLRNPLFAINFGAERLLR----------KFPDPAT- 207

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ il +++r +L++dlLd++r + g
AM181176_4 208 ----------DTLVRHILTSGRRAAQLVEDLLDFARGRLG 237

AM181176_2196: domain 1 of 1, from 180 to 245: score 58.8, E = 3.7e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks+fla +sH+LR+P+++I +++ L++ ++l+ e+
AM181176_2 180 EKSRFLAQASHDLRQPIHSIGLFTACLRD---------ANLGGEE-- 215

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++ i+r+++ ++L + +Ld+ +++g
AM181176_2 216 ----------LRLVDNIDRSLHTVSQLFRSILDIYTLDNG 245

AM181176_4868: domain 1 of 1, from 211 to 277: score 58.3, E = 5e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + f++++sHELRTPL ++ +elLle+ ++ +
AM181176_4 211 REQMFTSDVSHELRTPLMVLASSCELLLEN--------PAIDQRG-- 247

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +++i r+ e +++L++ +L l+r+e+
AM181176_4 248 ----------RNQVQRIARACEEMRELVQTFLMLARAEHD 277

AM181176_0681: domain 1 of 1, from 241 to 307: score 58.2, E = 5.4e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s+f +l+HELR PLt ++g a++ l e+++e+
AM181176_0 241 QLSQFSDDLAHELRAPLTNLMGKAQVTLS---------RERPSEE-- 276

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+ le+ +e erl+r+++d+L l++ ++
AM181176_0 277 ---------YKTSLESCTEEMERLSRMVSDMLFLAQVSHP 307

AM181176_4771: domain 1 of 1, from 227 to 291: score 57.6, E = 8e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++l+++sHELR PL+ +r ++ l+++ +s+e+r
AM181176_4 227 SQRQLLRDVSHELRSPLARLRIALALAER-----------ASPEER- 261

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ ++ re +rl++Li+++L l+r +a
AM181176_4 262 ----------EKLWPRLTRECDRLEALISEILVLARVDAD 291

AM181176_4089: domain 1 of 1, from 245 to 311: score 56.2, E = 2.1e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++ +++HELRTP++ ++g ++++l + +s e
AM181176_4 245 QLGQVSTDMAHELRTPINNLLGETQVALQ---------QSRSIES-- 280

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+++l + +e+erl r+++++L l+r +
AM181176_4 281 ---------YQQLLASNVEELERLARMLDNMLFLARTDPA 311

AM181176_3372: domain 1 of 1, from 150 to 216: score 54.8, E = 5.2e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ fl l H+LRTPL aI++ a++L++ +++l+e
AM181176_3 150 SRNVFLGILGHDLRTPLGAILLGADMLRR--------SPALGERN-- 186

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ i+ +++r ++++ dlLdl+r + g
AM181176_3 187 ----------TRVATQIYTSVQRASQIVGDLLDLTRCQMG 216

AM181176_4014: domain 1 of 1, from 201 to 263: score 53.5, E = 1.2e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+ +l ++sHELR PLt +++++ lL+ + r
AM181176_4 201 AQHHLLHDISHELRSPLTRMQAAIGLLRQ-------------DAAR- 233

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+le+i+re+er++ Li+ lL+l+r++
AM181176_4 234 ----------LEMLERIERESERMDTLIEALLTLARLQGR 263

AM181176_4377: domain 1 of 1, from 796 to 863: score 53.3, E = 1.4e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++fla++sH+L +PL+a r+++ +L + + ls+e
AM181176_4 796 SKTRFLAAVSHDLMQPLNAARLFSAALSH-------QNDGLSSEA-- 833

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++++ +++++++ ++Li+dlLd+sr+e+g
AM181176_4 834 ----------RQLVQHLDSSLRSAEDLISDLLDISRLENG 863

AM181176_4995: domain 1 of 1, from 238 to 303: score 53.2, E = 1.4e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++f+a+++HELRTPL+ +r +a+ ++ + +e qr
AM181176_4 238 RERRFIADAAHELRTPLAILRIHAQNAQS----------AITEAQR- 273

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+l+ + + ++r r+ ++lL+++rie +
AM181176_4 274 ----------REALDFLVNGVDRATRIGSQLLTMARIEPQ 303

AM181176_4348: domain 1 of 1, from 186 to 252: score 52.6, E = 2.1e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++a+l+H++RTPL+a + ya+ L + + l+ ++
AM181176_4 186 SLGRMVASLAHQIRTPLSAALIYASHLTD---------EQLPVATH- 222

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ ++++ ++ l+++++d+L ++r e +
AM181176_4 223 ----------QRFAGRLKERLHELEHQVRDMLVFARGELP 252

AM181176_2193: domain 1 of 1, from 177 to 242: score 50.1, E = 1.1e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks+fla +sH+LR+P+++I +++ L++ + l e+
AM181176_2 177 EKSRFLAQASHDLRQPIHSIGLFTACLRD---------ASLRGEE-- 212

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++ i+r+++ ++L + +Ld+ +++
AM181176_2 213 ----------LRLVDNIDRSLHTVSQLFRSILDIYTLDNR 242

AM181176_3006: domain 1 of 1, from 136 to 200: score 48.8, E = 2.5e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s + a+++HELRTPLt +rg ++ L e + +++q
AM181176_3 136 EQSFWNAAIAHELRTPLTILRGRLQGLAE---------GVFTPDQ-- 171

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++l+++e l rLi+dl+ +++g
AM181176_3 172 -----------AQFYSLLNQVEGLTRLIEDLRVVGLADNG 200

AM181176_2655: domain 1 of 1, from 212 to 277: score 48.7, E = 2.7e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++l ++sHELRTPLt + + + l+l ++l+e
AM181176_2 212 QQRDLLNAVSHELRTPLTRLDFGLALALS---------EDLPEAS-- 247

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re l+++ ++ l++L+ +lL +sr++++
AM181176_2 248 ----------RERLQSLVAHIRELDELVLELLSYSRLQNP 277

AM181176_4288: domain 1 of 1, from 225 to 289: score 48.1, E = 4.1e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++ +++HELR PLtaI+++++++++ te + +
AM181176_4 225 RERRLTGDAAHELRSPLTAIKTHLQVARM---------TEGAARD-- 260

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l +++ a+rl r +++lL l+r e
AM181176_4 261 -----------QSLAHAEEGADRLHRTLEQLLLLARVEGS 289

AM181176_3405: domain 1 of 1, from 205 to 270: score 47.9, E = 4.5e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++e++ ++sHELRTP++ +++ ++ L+ ++ qr
AM181176_3 205 NQRELTNAVSHELRTPIARLSFELDQLKQ----------QTDPRQR- 240

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e++ ++ ++ l++++++lL+++ +e g
AM181176_3 241 ----------SELIADMYADLGELEEMVSELLTYASLERG 270

AM181176_2696: domain 1 of 1, from 361 to 427: score 47.2, E = 7.4e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt Ir ++ L+ + lsee r
AM181176_2 361 AIGQLTGGVAHDFNNLLTIIRSSVDFLRQ---------PGLSEERR- 397

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y + + +er ++L ++lL ++r +
AM181176_2 398 ----------QRYMGAVSDTVERASKLTSQLLAFARRQPL 427

AM181176_0279: domain 1 of 1, from 368 to 436: score 44.1, E = 5.6e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ + a++sHEL++PL+aIr yae ++ ld +e++ +
AM181176_0 368 ALGTMSASISHELNQPLAAIRSYAENAEILLD------HERTTDA-- 406

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r l+ i + + r+ ++i l+ ++r +
AM181176_0 407 ----------RGNLKLISELTGRMASIIAHLRAFARRDRH 436

AM181176_3562: domain 1 of 1, from 236 to 294: score 43.9, E = 6.2e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++la++sH+L+TPLt +r+ +elL+
AM181176_3 236 GRTRMLAAVSHDLNTPLTELRLQVELLEP------------------ 264

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ + +l+++ l++++++ L + r +a
AM181176_3 265 ----------GEARDDMLESLSELSAMVRETLNFVRDDAV 294

AM181176_0253: domain 1 of 1, from 221 to 280: score 42.9, E = 1.2e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +la++sH+LRTPLt +r+ +el+ + +
AM181176_0 221 ERELMLAGVSHDLRTPLTRLRLSLELMGN----------------H- 250

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++ + r++e ++++++++L + r +
AM181176_0 251 ----------TDLTDDMVRDIEDMDAILDQFLAFIRDGRD 280

AM181176_2950: domain 2 of 2, from 168 to 241: score 42.9, E = 1.2e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f++ ++HE RTPL+++++ ++l ++ + ++++ + +
AM181176_2 168 MRDDFMSIVAHEVRTPLNGLILETQLRKM-----HLARDNAAAFALD 209

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + ++++ +r++++l rLi+d+Ld sri++g
AM181176_2 210 KM--------HAMVDRDERQIQSLIRLIEDMLDVSRIRTG 241

AM181176_2953: domain 1 of 1, from 185 to 253: score 40.8, E = 4.9e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+I+g +elL++++ ++++l++ +
AM181176_2 185 AVGQLTGGIAHDFNNMLTGIIGSLELLRRRV-----SRGKLDDLD-- 224

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ +a+r L +lL +sr ++
AM181176_2 225 -----------SLIDLGVTSANRAAGLTHRLLAFSRRQSL 253

AM181176_5120: domain 1 of 1, from 756 to 822: score 39.5, E = 1.1e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++a+++HE+ +P+t+I +a+ L+e e +
AM181176_5 756 SIGRLAAGVAHEIGNPITGIACLAQNLRE-------------ERE-- 787

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
ed+e+ e+ il++++r +r+++ l+ ++ ++
AM181176_5 788 -----EDGEIIEISGQILEQTKRVSRIVQSLMSFAHAGGH 822

AM181176_2561: domain 1 of 1, from 457 to 525: score 39.5, E = 1.1e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+I+g ++l++++ + +s++
AM181176_2 457 AVGQLTGGIAHDFNNMLTGIIGSLDLMQRYIA------AGRSDDI-- 495

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++ + ++a+r +L +lL +sr ++
AM181176_2 496 ----------GRFTDAAVSSAHRAAALTHRLLAFSRRQSL 525

AM181176_3521: domain 1 of 1, from 198 to 264: score 36.4, E = 8.1e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + ++ +++H++++ L +I g+++lL + +e + +q+
AM181176_3 198 AIGGLTGGVAHDFNNLLQVIAGNLHLLSR---------HEPDNPQV- 234

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + ++ ++er +L ++lL ++r +
AM181176_3 235 ----------QRRVAAAIAAVERGAKLSSQLLAFARRQPL 264

AM181176_1110: domain 1 of 1, from 410 to 478: score 36.2, E = 9.6e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +++ +++HEL++PL+a+r+++ ++l + +++
AM181176_1 410 AIGQMSTSIAHELNQPLAALRTLSGNTVRFL-------ERGALDTA- 448

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l+ti + ++r+ r+ l+ ++r +
AM181176_1 449 ----------SANLKTINELIDRMGRITASLRSFARRGDD 478

AM181176_4846: domain 1 of 1, from 270 to 313: score 34.9, E = 2.3e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s++++++sH+LRTP+t +r+ +elL++ ++l ++
AM181176_4 270 ERSQLFSAISHDLRTPITRLRLRVELLED---------ENLQAKF-- 305

peLRledpeyreyletil<-*
+ l+ ++
AM181176_4 306 ----------GRDLDELE 313

AM181176_0618: domain 1 of 1, from 682 to 752: score 34.0, E = 4e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++e++ +l+HE+++PL+++r+++ l++l ++ ++++
AM181176_0 682 TLGEMATGLAHEINQPLNVMRMAIVNVLKRL-------GNGDAQT-- 719

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++L e l++i+ +++r r ++ ++ + r +
AM181176_0 720 DYL-------TEKLQRIDAQVQRAARVVDHMRVFGRRSEI 752

AM181176_4814: domain 1 of 1, from 412 to 502: score 32.9, E = 8.4e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + ++a+++HE+++PL aI+ +++ ++++l d +++ e++
AM181176_4 412 SVGGLAAGMAHEINNPLGAILHNVQNIRRRL----SPDLPKNLEHAE 454

peLR.l.......edpeyreyletilreaerllrLindlLdlsrieag<-
++ +l++ ++ +e+ ++l+ i++++ r +++ +L +sr +
AM181176_4 455 QAGIeLetvnrylQSREVPQLLDGIQQAGARAAKIVTHMLSFSRRSNR 502

*

AM181176_4 - -

AM181176_1808: domain 1 of 1, from 142 to 185: score 32.0, E = 1.5e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ ++l ++sH+LRTPL+ +++ +e +++ t+l +
AM181176_1 142 QRARMLGAVSHDLRTPLSRLKLRLEQIED---------TKLQGQM-- 177

peLRledpeyreyletil<-*
r+ l+ ++
AM181176_1 178 ----------RQDLDDMI 185

AM181176_5337: domain 1 of 1, from 205 to 271: score 28.0, E = 2e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +a+++H++++ L a+++ +++ + ++ ++++
AM181176_5 205 SLGMVAASIAHDFNNLLQALSASLQMVRL--------RARRPDDV-- 241

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ + l+++++ + L+n lL+ r +++
AM181176_5 242 ----------ERFSDAGLQAVDQGRLLVNHLLTSVRHDSP 271

AM181176_2451: domain 1 of 1, from 203 to 269: score 27.5, E = 2.7e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +a+++H++++ L a+++ +++++ ++ ++ +
AM181176_2 203 SLGMVTASIAHDFNNILQALSASLQMIRL--------RARRPKDV-- 239

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ +t l+++++ ++L++ lL r++++
AM181176_2 240 ----------EKFSDTGLQAVDQGRQLVSHLLSCVRLDSP 269


Histogram of all scores:
score obs exp (one = represents 19 sequences)
----- --- ---
-16 1 0|=
-15 0 0|
-14 11 0|=
-13 45 4|*==
-12 214 135|=======*====
-11 552 701|============================== *
-10 971 1302|==================================================== *
-9 1084 1344|==========================================================*
-8 1025 1006|====================================================*=
-7 796 634|=================================*========
-6 442 365|===================*====
-5 305 200|==========*======
-4 167 107|=====*===
-3 107 56|==*===
-2 57 29|=*=
-1 36 15|*=
0 18 8|*
1 12 4|*
2 4 2|*
3 5 1|*
> 4 69 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 467.1361
P(chi-square) = 0

Total sequences searched: 6009

Whole sequence top hits:
tophits_s report:
Total hits: 61
Satisfying E cutoff: 61
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 60
Satisfying E cutoff: 60
Total memory: 45K


Acknowledgements:

This research is funded by:

Developed by: