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Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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76 projects found  

1 accessions found for Azoarcus sp. BH72  

Data for AM406670  

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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: AM406670.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
AM406670_3682 CDS_4043889-4047515 104.4 3.1e-29 1
AM406670_2574 CDS_2856457-2853962 104.0 3.9e-29 1
AM406670_3942 CDS_4325139-4321945 99.9 5.6e-28 1
AM406670_3944 CDS_4328109-4325551 98.7 1.2e-27 1
AM406670_2401 CDS_2643620-2646658 95.9 7.7e-27 1
AM406670_2481 CDS_2745688-2740640 95.3 1.1e-26 1
AM406670_1491 CDS_1632525-1630684 93.8 3e-26 1
AM406670_0165 CDS_181446-182717 90.4 2.8e-25 1
AM406670_2449 CDS_2705901-2703151 84.8 1e-23 1
AM406670_2411 CDS_2665499-2662752 84.6 1.2e-23 1
AM406670_0654 CDS_685558-689061 80.5 1.7e-22 1
AM406670_2361 CDS_2603754-2601814 72.7 2.8e-20 1
AM406670_2713 CDS_3000354-2999173 71.6 6e-20 1
AM406670_3092 CDS_3402439-3400910 70.0 1.7e-19 1
AM406670_2943 CDS_3233239-3231842 69.3 2.6e-19 1
AM406670_0735 CDS_787797-786724 68.6 4.3e-19 1
AM406670_0975 CDS_1048371-1049858 67.4 9.1e-19 1
AM406670_1816 CDS_1992008-1995052 66.2 2e-18 1
AM406670_3435 CDS_3769862-3771781 64.9 4.7e-18 1
AM406670_0262 CDS_291683-290292 63.5 1.1e-17 1
AM406670_2797 CDS_3082083-3083501 62.0 3.2e-17 1
AM406670_3354 CDS_3694586-3693033 61.8 3.5e-17 1
AM406670_1583 CDS_1743509-1741890 61.6 3.9e-17 1
AM406670_0702 CDS_751824-750394 61.0 5.8e-17 1
AM406670_3380 CDS_3721649-3719043 59.6 1.5e-16 2
AM406670_2456 CDS_2713823-2711355 58.0 4.2e-16 1
AM406670_1661 CDS_1826376-1824697 57.7 5e-16 1
AM406670_3157 CDS_3467557-3468843 57.1 7.4e-16 1
AM406670_1586 CDS_1746744-1744963 56.7 9.5e-16 1
AM406670_3670 CDS_4032106-4033452 54.7 3.6e-15 1
AM406670_0072 CDS_82158-84344 51.7 2.5e-14 1
AM406670_3980 CDS_4368294-4366174 48.9 1.6e-13 1
AM406670_3613 CDS_3967591-3968691 47.6 3.6e-13 1
AM406670_0917 CDS_985311-983320 47.5 3.9e-13 1
AM406670_3489 CDS_3834263-3832128 46.6 7e-13 1
AM406670_2766 CDS_3048521-3049915 45.7 1.3e-12 2
AM406670_1707 CDS_1875826-1874441 44.7 2.4e-12 1
AM406670_2671 CDS_2947732-2945927 44.5 2.9e-12 1
AM406670_0693 CDS_738734-736677 43.3 6.2e-12 1
AM406670_0053 CDS_61287-59974 42.4 1.1e-11 1
AM406670_1914 CDS_2102704-2100821 38.9 1.1e-10 1
AM406670_0457 CDS_488874-490262 36.7 4.4e-10 1
AM406670_2455 CDS_2711352-2709625 34.3 2.2e-09 1
AM406670_2744 CDS_3026732-3028066 33.5 3.7e-09 1
AM406670_3807 CDS_4170469-4171854 33.4 3.9e-09 1
AM406670_1374 CDS_1501285-1503999 32.1 9.2e-09 2

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
AM406670_3682 1/1 557 622 .. 1 87 [] 104.4 3.1e-29
AM406670_2574 1/1 171 236 .. 1 87 [] 104.0 3.9e-29
AM406670_3942 1/1 414 479 .. 1 87 [] 99.9 5.6e-28
AM406670_3944 1/1 619 684 .. 1 87 [] 98.7 1.2e-27
AM406670_2401 1/1 277 342 .. 1 87 [] 95.9 7.7e-27
AM406670_2481 1/1 935 1000 .. 1 87 [] 95.3 1.1e-26
AM406670_1491 1/1 384 452 .. 1 87 [] 93.8 3e-26
AM406670_0165 1/1 188 256 .. 1 87 [] 90.4 2.8e-25
AM406670_2449 1/1 540 606 .. 1 87 [] 84.8 1e-23
AM406670_2411 1/1 685 752 .. 1 87 [] 84.6 1.2e-23
AM406670_0654 1/1 714 780 .. 1 87 [] 80.5 1.7e-22
AM406670_2361 1/1 279 343 .. 1 87 [] 72.7 2.8e-20
AM406670_2713 1/1 161 227 .. 1 87 [] 71.6 6e-20
AM406670_3092 1/1 276 343 .. 1 87 [] 70.0 1.7e-19
AM406670_2943 1/1 244 310 .. 1 87 [] 69.3 2.6e-19
AM406670_0735 1/1 137 202 .. 1 87 [] 68.6 4.3e-19
AM406670_0975 1/1 258 323 .. 1 87 [] 67.4 9.1e-19
AM406670_1816 1/1 631 698 .. 1 87 [] 66.2 2e-18
AM406670_3435 1/1 279 344 .. 1 87 [] 64.9 4.7e-18
AM406670_0262 1/1 234 300 .. 1 87 [] 63.5 1.1e-17
AM406670_2797 1/1 243 310 .. 1 87 [] 62.0 3.2e-17
AM406670_3354 1/1 304 369 .. 1 87 [] 61.8 3.5e-17
AM406670_1583 1/1 308 376 .. 1 87 [] 61.6 3.9e-17
AM406670_0702 1/1 257 322 .. 1 87 [] 61.0 5.8e-17
AM406670_3380 2/2 648 716 .. 1 87 [] 58.6 2.8e-16
AM406670_2456 1/1 598 666 .. 1 87 [] 58.0 4.2e-16
AM406670_1661 1/1 340 408 .. 1 87 [] 57.7 5e-16
AM406670_3157 1/1 210 276 .. 1 87 [] 57.1 7.4e-16
AM406670_1586 1/1 368 436 .. 1 87 [] 56.7 9.5e-16
AM406670_3670 1/1 211 276 .. 1 87 [] 54.7 3.6e-15
AM406670_0072 1/1 457 524 .. 1 87 [] 51.7 2.5e-14
AM406670_3980 1/1 483 555 .. 1 87 [] 48.9 1.6e-13
AM406670_3613 1/1 157 218 .. 1 87 [] 47.6 3.6e-13
AM406670_0917 1/1 441 511 .. 1 87 [] 47.5 3.9e-13
AM406670_3489 1/1 470 537 .. 1 87 [] 46.6 7e-13
AM406670_2766 1/2 245 313 .. 1 87 [] 45.3 1.6e-12
AM406670_1707 1/1 241 300 .. 1 87 [] 44.7 2.4e-12
AM406670_2671 1/1 359 429 .. 1 87 [] 44.5 2.9e-12
AM406670_0693 1/1 312 377 .. 1 87 [] 43.3 6.2e-12
AM406670_0053 1/1 230 289 .. 1 87 [] 42.4 1.1e-11
AM406670_1914 1/1 405 473 .. 1 87 [] 38.9 1.1e-10
AM406670_0457 1/1 237 303 .. 1 87 [] 36.7 4.4e-10
AM406670_2455 1/1 348 416 .. 1 87 [] 34.3 2.2e-09
AM406670_2744 1/1 232 290 .. 1 87 [] 33.5 3.7e-09
AM406670_3807 1/1 207 302 .. 1 87 [] 33.4 3.9e-09
AM406670_1374 1/2 672 742 .. 1 87 [] 32.1 9.3e-09

Alignments of top-scoring domains:
AM406670_3682: domain 1 of 1, from 557 to 622: score 104.4, E = 3.1e-29
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+flan+sHE+RTP+++I+g++el+l+ t l++ q
AM406670_3 557 AKSDFLANMSHEIRTPMNGIIGMTELALD---------TRLDPTQ-- 592

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+yl+++l++ae+ll ++nd+Ld+s+ieag
AM406670_3 593 ----------RDYLNIVLSSAESLLVIVNDILDFSKIEAG 622

AM406670_2574: domain 1 of 1, from 171 to 236: score 104.0, E = 3.9e-29
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+eflan+sHE+RTP+++I+g+++lLl+ ++l +eq
AM406670_2 171 AKGEFLANMSHEIRTPMNGILGMTDLLLD---------SALAPEQ-- 206

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+yl+t++++ae ll L+nd+Ld+srieag
AM406670_2 207 ----------RDYLQTVKSSAEALLTLLNDILDFSRIEAG 236

AM406670_3942: domain 1 of 1, from 414 to 479: score 99.9, E = 5.6e-28
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks f+an+sHE+RTP+++++g++elLl+ tel++eq
AM406670_3 414 AKSLFVANMSHEIRTPMNGVLGMTELLLT---------TELDDEQ-- 449

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++ et++++a+ ll ++nd+Ld+s+i+ag
AM406670_3 450 ----------RDFAETARHSAQALLGILNDILDFSKIDAG 479

AM406670_3944: domain 1 of 1, from 619 to 684: score 98.7, E = 1.2e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks+f+a++sHELRTPL++I+g+ael+++ ++ ++e
AM406670_3 619 MKSDFVASMSHELRTPLNGILGFAELIRD---------DAPNDEV-- 654

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ +ti++++e+ll+L+nd+Ld+++ieag
AM406670_3 655 ----------RDHADTIYQSGEHLLSLVNDVLDIAKIEAG 684

AM406670_2401: domain 1 of 1, from 277 to 342: score 95.9, E = 7.7e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla +sHE+RTP++a++g+++l+l+ tels++q
AM406670_2 277 AKSDFLARMSHEIRTPMNAVIGLTHLALR---------TELSPQQ-- 312

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+yl++i+ +++ ll +ind+Ld+s+ieag
AM406670_2 313 ----------RDYLRKIRGSSQALLGIINDILDFSKIEAG 342

AM406670_2481: domain 1 of 1, from 935 to 1000: score 95.3, E = 1.1e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak flan+sHE+RTP++a++g+++l l+ t+l+ +q
AM406670_2 935 AKANFLANMSHEIRTPMNAVIGMTHLVLN---------TDLTRQQ-- 970

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+yl++i+ ++++ll +ind+Ldls+ieag
AM406670_2 971 ----------RDYLKKIQGSSQHLLGIINDILDLSKIEAG 1000

AM406670_1491: domain 1 of 1, from 384 to 452: score 93.8, E = 3e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ fla++sHELRTPL+aI+g++ +Ll++l ++l+e+q
AM406670_1 384 AKDHFLASMSHELRTPLNAIIGFTGTLLMKL------PGPLNEDQ-- 422

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l+t++r+a +ll+LindlLd +rieag
AM406670_1 423 ----------EKQLRTVQRSASHLLSLINDLLDVARIEAG 452

AM406670_0165: domain 1 of 1, from 188 to 256: score 90.4, E = 2.8e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+an+sHELRTPLt++ g++e+L +++ ++ ++++
AM406670_0 188 MRQDFVANVSHELRTPLTVVGGFLETLIDGA-------GDFEPDDV- 226

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++yl+ +l++++r+++Li+dlL+ls +e+g
AM406670_0 227 ----------QRYLRLALEQSNRMRHLIEDLLTLSALETG 256

AM406670_2449: domain 1 of 1, from 540 to 606: score 84.8, E = 1e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fl+++sHELRTP++a++g+a+lL+ d++l+++q
AM406670_2 540 AKSDFLSSMSHELRTPMNAVLGFAQLLEC--------DDTLTADQ-- 576

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ + il+++ +ll Lin++Ldl+rieag
AM406670_2 577 ----------RDNVAEILKAGGHLLTLINEVLDLARIEAG 606

AM406670_2411: domain 1 of 1, from 685 to 752: score 84.6, E = 1.2e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f++++ HELRTPLt+Ir+++e+L e d+ + e+r
AM406670_2 685 LKDDFMSSVTHELRTPLTSIRALSEMLYE--------DPRIGLEDR- 722

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l +i +eaerl rL+n++Ldl++ie+g
AM406670_2 723 ----------TRFLGIIVSEAERLTRLVNQVLDLAKIESG 752

AM406670_0654: domain 1 of 1, from 714 to 780: score 80.5, E = 1.7e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+ + ++sHELRTPL++I+gya++L d++ ++
AM406670_0 714 AKSRYVTSISHELRTPLNSILGYAQILDG--------DEAIPPHR-- 750

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+++++i++++e+ll+Li+ Ld++rie+g
AM406670_0 751 ----------RQAVSVIKKSGEHLLSLIEGTLDIARIESG 780

AM406670_2361: domain 1 of 1, from 279 to 343: score 72.7, E = 2.8e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sH+LR+PL+a+++y+ +L++ +l++ +
AM406670_2 279 AKSRFLAAASHDLRQPLSALSLYVGTLER----------KLPASE-- 313

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r + + i +++ +l++L+++lLdls++eag
AM406670_2 314 ----------RALASGIGDCVTHLSELLSNLLDLSKLEAG 343

AM406670_2713: domain 1 of 1, from 161 to 227: score 71.6, E = 6e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e++a+l+H+LRTPL+a ++y+ L+ +el++++r
AM406670_2 161 AMGEMVAGLAHQLRTPLAAALLYTGNLRQ---------PELGAPER- 197

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ +++++ +++l+rLi+d+L ++r ++
AM406670_2 198 ----------AKVADRAIERLRYLERLIRDMLLFARGDSL 227

AM406670_3092: domain 1 of 1, from 276 to 343: score 70.0, E = 1.7e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ la++sH++RTPLt++ g+a++L +++ l++e+
AM406670_3 276 LRNSILASISHDIRTPLTVLFGLADALAL-------SEGRLGSEE-- 313

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+ + i+++a rl ++++ lLd++r++ag
AM406670_3 314 ----------REAAHAIRDQAGRLHDMVDKLLDMARLQAG 343

AM406670_2943: domain 1 of 1, from 244 to 310: score 69.3, E = 2.6e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s+f a+++HELRTP++ +++ +e++l +++s+++
AM406670_2 244 RLSDFSADIAHELRTPVSNLMTQTEVALS---------HARSPDE-- 279

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yre l + l+e er+ r+++d+L l+++e+g
AM406670_2 280 ---------YREVLASNLEEYERIARMVSDMLFLAQAENG 310

AM406670_0735: domain 1 of 1, from 137 to 202: score 68.6, E = 4.3e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +e+++nl+HE+++PL +Irg a+lL++ el ++q+
AM406670_0 137 ANRELIRNLAHEIKNPLGGIRGSAQLLER----------ELADPQL- 172

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
rey+e+i+ ea+rl++L n+lL+ + +
AM406670_0 173 ----------REYTEVIIAEADRLQDLMNRLLTSHSMMRP 202

AM406670_0975: domain 1 of 1, from 258 to 323: score 67.4, E = 9.1e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++f+a+++H++RTPLt++++ ++l+l e ++eq+
AM406670_0 258 AQQRFIADAAHQMRTPLTGLKMQTDLALL----------ENDPEQL- 293

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r l i ++a+r ++Lin+lL l+r+ea
AM406670_0 294 ----------RASLTHIADSADRASHLINQLLSLARAEAS 323

AM406670_1816: domain 1 of 1, from 631 to 698: score 66.2, E = 2e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+efla +sHELR PL+a++g +++L + e ++ +
AM406670_1 631 AKDEFLAIVSHELRSPLNALKGWSQVLIG--------SREPDAALV- 668

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ e i+r +++ rLi+dlLd sri +g
AM406670_1 669 ----------ARAAEAIKRNIDHQTRLIDDLLDSSRIISG 698

AM406670_3435: domain 1 of 1, from 279 to 344: score 64.9, E = 4.7e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sH+LR+P++a+ ++++ L + s +
AM406670_3 279 AKSRFLAAASHDLRQPMHALGLFISELAQ---------QSSSHHE-- 314

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+++++i +ae +++L++ lLd+s+++ag
AM406670_3 315 ----------RRLVQRIAASAEAMENLLDSLLDISKLDAG 344

AM406670_0262: domain 1 of 1, from 234 to 300: score 63.5, E = 1.1e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++f+a+++HELRTPL+a+r a+++ + +e s+
AM406670_0 234 GEQRFTADAAHELRTPLAALRIQAQVAAR--------AGEDSAAR-- 270

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l+ ++ ++r+ +L+++lL+l+r+e
AM406670_0 271 ----------ERALDQVIAGVDRMTHLVDQLLTLARLEPA 300

AM406670_2797: domain 1 of 1, from 243 to 310: score 62.0, E = 3.2e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ la+lsH+LRTP+t+++g+a+ L + ++++l++e
AM406670_2 243 LRTSVLAALSHDLRTPMTVLIGLADSLVM-------SRDPLPPEA-- 280

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++l++a+ l+ ++n++Ld++r+ +g
AM406670_2 281 ----------HQTATSLLHQARALSGILNNVLDMARLHSG 310

AM406670_3354: domain 1 of 1, from 304 to 369: score 61.8, E = 3.5e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++++a+++HE+R+PL+a+ +aelL e +++++ q
AM406670_3 304 ALGRLTASMAHEIRNPLSAVTQAAELLTE---------EKRTDMQ-- 339

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++i + a+r++r+i+d+L l r e+
AM406670_3 340 ----------LRLARIINDNARRIERMIRDVLALGRREQA 369

AM406670_1583: domain 1 of 1, from 308 to 376: score 61.6, E = 3.9e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f +++sH+LR PL +I+gya+lL +++d ++l
AM406670_1 308 ELEAFSSSVSHDLRAPLRTIQGYADLLATRVD------PPLEGTP-- 346

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+e+++++a+r++ Li+dlL ls+
AM406670_1 347 ----------LSYVERMRSSARRMQVLIEDLLKLSKVSRT 376

AM406670_0702: domain 1 of 1, from 257 to 322: score 61.0, E = 5.8e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + +l+HEL+ PLta+rg+aelL e + s+++r
AM406670_0 257 YVEHYVQSLAHELKSPLTAVRGAAELLAE----------APSADDR- 292

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++ i ++aer++ +i++lL l+r e+
AM406670_0 293 ----------ARFVGHIGEQAERMQLIIDRLLALARVEQL 322

AM406670_3380: domain 2 of 2, from 648 to 716: score 58.6, E = 2.8e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+ ++sH+L+ PL +I gy++lLle +++ l++e
AM406670_3 648 ELETFAYSVSHDLKAPLRGIDGYSHLLLE------DHSDRLDDEG-- 686

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +++ i+ ++++ rLi+dlL +sr e
AM406670_3 687 ----------RLFISHIRTGVRQMARLIDDLLAYSRVERR 716

AM406670_2456: domain 1 of 1, from 598 to 666: score 58.0, E = 4.2e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+ ++sH+LR PL a++g+a++Lle++ + l+++
AM406670_2 598 ELDSFAYAVSHDLRSPLRAMSGFAQALLEDYG------DRLDADG-- 636

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +l+ i+ +++ +++Li+ +++lsr g
AM406670_2 637 ----------RGFLDQIILASRKMNDLIEGIMELSRSTGG 666

AM406670_1661: domain 1 of 1, from 340 to 408: score 57.7, E = 5e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f ++sH+LR PL aI g+a +L+eel+ ++l+e
AM406670_1 340 ELEAFSYSVSHDLRAPLRAIDGFARILEEELE------EKLDETA-- 378

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r l++i+++++r+ +Li+ l +l+r+ +
AM406670_1 379 ----------RSHLDRIRKATQRMAHLIDALIELARLTRQ 408

AM406670_3157: domain 1 of 1, from 210 to 276: score 57.1, E = 7.4e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + f++++sHELRTPL aI ++elLle el++ +r+
AM406670_3 210 RETLFTSDVSHELRTPLMAIASTCELLLE----------ELPAGTRA 246

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e l+++++ e +++L++ +L l+r
AM406670_3 247 ----------HEQLRRLQHGCEEMRELVETFLCLARGNGR 276

AM406670_1586: domain 1 of 1, from 368 to 436: score 56.7, E = 9.5e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f ++sH+LR PL +I gy+ lL+ e+ + l+++
AM406670_1 368 ELEAFSYSVSHDLRAPLRVIDGYSALLESEYA------EQLDSDA-- 406

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +l +++ +++r+ +Li+dlLdl+r+ +
AM406670_1 407 ----------RGLLGRMRLAVQRMGELIDDLLDLARMSRQ 436

AM406670_3670: domain 1 of 1, from 211 to 276: score 54.7, E = 3.6e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ f+a+++HELRTPL+a+++ ++l ++ + se +r
AM406670_3 211 AQRAFVADAAHELRTPLAALQLQLQLTER----------AGSEAER- 246

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +l +++ + r r +++lL+l+r
AM406670_3 247 ----------RAALGELRQGLLRATRVVQQLLTLARQTPD 276

AM406670_0072: domain 1 of 1, from 457 to 524: score 51.7, E = 2.5e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +e++a+++HE+++P+++I+g++el +e l + s++
AM406670_0 457 AIGELTAGVAHEINNPVAVIQGNLELVRELL-------GGDSAPV-- 494

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l i+ ++ r+ ++ lL+++r +
AM406670_0 495 ----------ADELAQIDAQVGRIHGIVTKLLQFARPGDF 524

AM406670_3980: domain 1 of 1, from 483 to 555: score 48.9, E = 1.6e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a e ++ l+HE+++PLt I++ ae L +l +++ + + +
AM406670_3 483 AWAEVARRLAHEIKNPLTPIQLSAERLAFKL-------ADQLDGDGR 522

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+L ++ ++ti +++e++ +L+n ++d++r+ a+
AM406670_3 523 EML-------ERSTRTIVNQVESMKNLVNAFRDYARLPAP 555

AM406670_3613: domain 1 of 1, from 157 to 218: score 47.6, E = 3.6e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++fla++sH+LRTPLt +++ +e+L + + +
AM406670_3 157 ERDRFLAAVSHDLRTPLTRMKLRVETLAA-------------SGE-- 188

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ +++++++ + ++++ L + r ea
AM406670_3 189 ----------GEAHRRLREDIGEMASMLDATLNYLRGEAH 218

AM406670_0917: domain 1 of 1, from 441 to 511: score 47.5, E = 3.9e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++e++++l+HEL++PL+aI y +l++l+ +e + +++
AM406670_0 441 TMGEMASTLAHELNQPLAAIASYNTGCLNRLE-----ADEFDRDEL- 481

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++ e+i r+a+r ++i+++ d+ r ++
AM406670_0 482 ----------RDIHEKIGRQARRAGDIIRRVHDFVRRAEP 511

AM406670_3489: domain 1 of 1, from 470 to 537: score 46.6, E = 7e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +e++a+++HE+ +P ++I+g++elL+eel +e +
AM406670_3 470 AIGELTAGVAHEISNPTAVIQGNLELLREEL-------GEHATPV-- 507

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ i+++++r+++++ lL+++r ++
AM406670_3 508 ----------LNEIRLIDEQVNRIRKIVTKLLQFARPGEF 537

AM406670_2766: domain 1 of 2, from 245 to 313: score 45.3, E = 1.6e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ l+++sHEL+TPL+++r + lL +++ ++l++ q
AM406670_2 245 NRNRVLRHVSHELKTPLASLREGIALLTDGV------PGPLNAAQ-- 283

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re + ++ a++l++ i++lLd+ + +
AM406670_2 284 ----------REVTGILAANARSLQERIEQLLDYNASQFN 313

AM406670_1707: domain 1 of 1, from 241 to 300: score 44.7, E = 2.4e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ la++sH+LRTPL+ +r+ +e+ + ++e++
AM406670_1 241 DRALILAGVSHDLRTPLARLRLGIEM------------SGAPEDE-- 273

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + ++e ++r+i ++Ld+ r a+
AM406670_1 274 -------------VGAMVADIEEMDRIIGQFLDFGRGSAQ 300

AM406670_2671: domain 1 of 1, from 359 to 429: score 44.5, E = 2.9e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++e+ +l+HEL++PL++I ya+ L++++d + l++ +
AM406670_2 359 VLGELSGTLAHELNQPLATITNYAHSLRRRAD-----NQRLTDAAV- 399

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+ i ++aer ++ +++ ++r + +
AM406670_2 400 ----------REAAAEIAEQAERAAGILGRIRHFARKRRN 429

AM406670_0693: domain 1 of 1, from 312 to 377: score 43.3, E = 6.2e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +l+H++++ Lt I+g++++L++ + + +
AM406670_0 312 AVGQLTGGLAHDFNNLLTIIIGNLSALQT---------QLGDGPG-- 347

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ey+ +l++++r +Li +lL +sr +
AM406670_0 348 ----------AEYVAPALQASRRGAELIKRLLSFSRRQPL 377

AM406670_0053: domain 1 of 1, from 230 to 289: score 42.4, E = 1.1e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++ la++sH+L+TPLt +r+ + +L + +eq+
AM406670_0 230 ERTQILAAISHDLKTPLTRLRLRVGALPA-------------DEQA- 262

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+i+ +++ +++L+++ Ld++r +
AM406670_0 263 -------------RARIEADIDAMSHLVEEGLDYARSARP 289

AM406670_1914: domain 1 of 1, from 405 to 473: score 38.9, E = 1.1e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++++a+++HEL++PL a+rg+a l +l+ ++ l + +
AM406670_1 405 ALGQMAAGVAHELNQPLQALRGFAGNSLVFLE-----RGRLEPLT-- 444

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l+ i + +er+ rL +l ++ ++
AM406670_1 445 -----------DNLRQINELVERMARLTAQLKVFASRQQS 473

AM406670_0457: domain 1 of 1, from 237 to 303: score 36.7, E = 4.4e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++H++R PL a+r +++ +++ ++ ++ +
AM406670_0 237 AAKHVSSAIAHDMRRPLIALRNAIDEARR---------SPGADPAL- 273

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r le +++++e llr + lL l+rieag
AM406670_0 274 ----------RTQLEGLRDQTEELLRTFSALLSLARIEAG 303

AM406670_2455: domain 1 of 1, from 348 to 416: score 34.3, E = 2.2e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++ +l H LR PL aI g+a lLle ++ + l++e
AM406670_2 348 ELEDLAYALTHNLRAPLRAINGFARLLLE------GHAERLNAEA-- 386

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l i+r++ r+ +++n +L l r
AM406670_2 387 ----------RDELMQIQRAGGRMGDMLNGILALLRSTGK 416

AM406670_2744: domain 1 of 1, from 232 to 290: score 33.5, E = 3.7e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++ la++sH+L TP+t +r+ ae+ +
AM406670_2 232 ERTRILAAISHDLQTPITRLRLRAEMVDD------------------ 260

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +i+++++ +++L+ + L ++r
AM406670_2 261 ----------DTLRGRIQSDLDAMQALVKEGLAYARSMDT 290

AM406670_3807: domain 1 of 1, from 207 to 302: score 33.4, E = 3.9e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldk......v.lagdte
++++++a+++HEL++P++ I+g++++L++++ + ++ + +gd++
AM406670_3 207 SLGRLVAGVAHELNNPISFILGNVHALKRYAGRlesylgAiHGGDSA 253

lseeqrlpeLR.......ledpeyreyletilreaerllrLindlLdlsr
q++++LR ++ ++l +++ ++ aer +++++ l +s
AM406670_3 254 EHLAQLRTRLRidrllgdL-----PALIDGTIEGAERTRDIVDGLKRFSA 298

ieag<-*
i+ +
AM406670_3 299 IDRE 302

AM406670_1374: domain 1 of 2, from 672 to 742: score 32.1, E = 9.3e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++e++++l+HEL++PL+aI y+ + +++ +gd + e+
AM406670_1 672 TMGEMASTLAHELNQPLSAIANYCAGCVTRM----QGDNWKQEDI-- 712

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++ +aer ++i++++++ + ++
AM406670_1 713 ----------LGAMQKASFQAERAGKIIRRIREFVKKSEP 742


Histogram of all scores:
score obs exp (one = represents 14 sequences)
----- --- ---
-14 8 0|=
-13 38 2|*==
-12 131 91|======*===
-11 312 472|======================= *
-10 568 877|========================================= *
-9 770 905|======================================================= *
-8 722 678|================================================*===
-7 550 427|==============================*=========
-6 365 245|=================*=========
-5 233 134|=========*=======
-4 104 72|=====*==
-3 60 38|==*==
-2 31 20|=*=
-1 17 10|*=
0 9 5|*
1 9 2|*
2 6 1|*
3 3 0|=
4 1 0|=
5 0 0|
6 1 0|=
> 7 51 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 407.1979
P(chi-square) = 0

Total sequences searched: 3989

Whole sequence top hits:
tophits_s report:
Total hits: 46
Satisfying E cutoff: 46
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 46
Satisfying E cutoff: 46
Total memory: 39K


Acknowledgements:

This research is funded by:

Developed by: