Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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264 projects found  

1 accessions found for Stenotrophomonas maltophilia K279a  

Data for AM743169  

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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: AM743169.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
AM743169_3423 CDS_3683268-3679762 94.3 2.4e-26 1
AM743169_2113 CDS_2266414-2269065 94.3 2.5e-26 1
AM743169_0837 CDS_926897-923670 93.8 3.4e-26 1
AM743169_4064 CDS_4415816-4418044 90.6 2.7e-25 1
AM743169_0187 CDS_206193-209858 88.7 9.5e-25 1
AM743169_2025 CDS_2160209-2163310 84.5 1.5e-23 1
AM743169_0839 CDS_931009-928238 84.3 1.7e-23 1
AM743169_0923 CDS_1023697-1022366 79.8 3.1e-22 1
AM743169_3556 CDS_3844783-3843416 74.7 8.8e-21 1
AM743169_0564 CDS_604707-606176 68.8 4.1e-19 1
AM743169_4279 CDS_4662969-4661236 66.6 1.7e-18 1
AM743169_0386 CDS_403065-400405 66.4 2e-18 1
AM743169_3546 CDS_3833205-3834818 66.2 2.3e-18 1
AM743169_4363 CDS_4754953-4751507 65.1 4.5e-18 1
AM743169_0099 CDS_106963-109380 64.9 5.1e-18 1
AM743169_2028 CDS_2164703-2165836 63.7 1.1e-17 1
AM743169_0540 CDS_581384-583364 60.9 7.2e-17 1
AM743169_4218 CDS_4596530-4597933 59.8 1.4e-16 1
AM743169_2556 CDS_2724601-2725983 58.0 4.7e-16 1
AM743169_2549 CDS_2714987-2716354 57.3 7.2e-16 1
AM743169_3368 CDS_3617906-3616620 55.2 3e-15 1
AM743169_0760 CDS_845026-846297 54.9 3.6e-15 1
AM743169_3729 CDS_4050135-4048744 54.7 4.1e-15 1
AM743169_1358 CDS_1488018-1489478 54.6 4.3e-15 1
AM743169_0149 CDS_171881-172942 53.4 9.5e-15 1
AM743169_3726 CDS_4043733-4046375 52.0 2.3e-14 1
AM743169_3981 CDS_4324058-4322760 50.9 4.8e-14 1
AM743169_3813 CDS_4143056-4141239 47.6 4.3e-13 1
AM743169_2504 CDS_2670209-2671285 47.1 5.9e-13 1
AM743169_2253 CDS_2425075-2422838 45.2 2e-12 1
AM743169_2851 CDS_3061081-3062784 43.3 6.6e-12 1
AM743169_1342 CDS_1467766-1466387 43.3 6.9e-12 1
AM743169_3524 CDS_3804157-3805446 42.7 1e-11 1
AM743169_2514 CDS_2683207-2684262 40.1 5.5e-11 1
AM743169_2079 CDS_2226536-2225460 39.8 6.7e-11 1
AM743169_2452 CDS_2613299-2616628 37.5 3e-10 1
AM743169_2024 CDS_2160030-2158894 37.2 3.6e-10 1
AM743169_2651 CDS_2839452-2840684 36.1 7.4e-10 1
AM743169_0565 CDS_607498-606173 34.6 2e-09 1
AM743169_1549 CDS_1699424-1700767 34.2 2.5e-09 1
AM743169_2237 CDS_2409023-2406717 33.1 5.2e-09 1
AM743169_2251 CDS_2422399-2419979 31.1 2e-08 1
AM743169_3811 CDS_4140797-4139286 28.1 1.4e-07 1
AM743169_1457 CDS_1603557-1604966 27.9 1.5e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
AM743169_3423 1/1 802 867 .. 1 87 [] 94.3 2.4e-26
AM743169_2113 1/1 355 420 .. 1 87 [] 94.3 2.5e-26
AM743169_0837 1/1 471 536 .. 1 87 [] 93.8 3.4e-26
AM743169_4064 1/1 74 139 .. 1 87 [] 90.6 2.7e-25
AM743169_0187 1/1 715 780 .. 1 87 [] 88.7 9.5e-25
AM743169_2025 1/1 364 432 .. 1 87 [] 84.5 1.5e-23
AM743169_0839 1/1 448 513 .. 1 87 [] 84.3 1.7e-23
AM743169_0923 1/1 210 274 .. 1 87 [] 79.8 3.1e-22
AM743169_3556 1/1 243 309 .. 1 87 [] 74.7 8.8e-21
AM743169_0564 1/1 264 332 .. 1 87 [] 68.8 4.1e-19
AM743169_4279 1/1 209 274 .. 1 87 [] 66.6 1.7e-18
AM743169_0386 1/1 652 720 .. 1 87 [] 66.4 2e-18
AM743169_3546 1/1 315 381 .. 1 87 [] 66.2 2.3e-18
AM743169_4363 1/1 782 848 .. 1 87 [] 65.1 4.5e-18
AM743169_0099 1/1 432 497 .. 1 87 [] 64.9 5.1e-18
AM743169_2028 1/1 155 222 .. 1 87 [] 63.7 1.1e-17
AM743169_0540 1/1 298 364 .. 1 87 [] 60.9 7.2e-17
AM743169_4218 1/1 245 309 .. 1 87 [] 59.8 1.4e-16
AM743169_2556 1/1 241 306 .. 1 87 [] 58.0 4.7e-16
AM743169_2549 1/1 236 302 .. 1 87 [] 57.3 7.2e-16
AM743169_3368 1/1 213 279 .. 1 87 [] 55.2 3e-15
AM743169_0760 1/1 213 279 .. 1 87 [] 54.9 3.6e-15
AM743169_3729 1/1 244 309 .. 1 87 [] 54.7 4.1e-15
AM743169_1358 1/1 258 323 .. 1 87 [] 54.6 4.3e-15
AM743169_0149 1/1 122 181 .. 1 79 [. 53.4 9.5e-15
AM743169_3726 1/1 516 581 .. 1 87 [] 52.0 2.3e-14
AM743169_3981 1/1 227 284 .. 1 87 [] 50.9 4.8e-14
AM743169_3813 1/1 366 434 .. 1 87 [] 47.6 4.3e-13
AM743169_2504 1/1 137 201 .. 1 87 [] 47.1 5.9e-13
AM743169_2253 1/1 520 588 .. 1 87 [] 45.2 2e-12
AM743169_2851 1/1 195 261 .. 1 87 [] 43.3 6.6e-12
AM743169_1342 1/1 238 303 .. 1 87 [] 43.3 6.9e-12
AM743169_3524 1/1 208 273 .. 1 87 [] 42.7 1e-11
AM743169_2514 1/1 124 194 .. 1 87 [] 40.1 5.5e-11
AM743169_2079 1/1 138 202 .. 1 87 [] 39.8 6.7e-11
AM743169_2452 1/1 753 818 .. 1 87 [] 37.5 3e-10
AM743169_2024 1/1 144 211 .. 1 87 [] 37.2 3.6e-10
AM743169_2651 1/1 203 269 .. 1 87 [] 36.1 7.4e-10
AM743169_0565 1/1 220 274 .. 1 76 [. 34.6 2e-09
AM743169_1549 1/1 237 295 .. 1 87 [] 34.2 2.5e-09
AM743169_2237 1/1 306 371 .. 1 87 [] 33.1 5.2e-09
AM743169_2251 1/1 429 499 .. 1 87 [] 31.1 2e-08
AM743169_3811 1/1 151 216 .. 1 87 [] 28.1 1.4e-07
AM743169_1457 1/1 254 312 .. 1 87 [] 27.9 1.5e-07

Alignments of top-scoring domains:
AM743169_3423: domain 1 of 1, from 802 to 867: score 94.3, E = 2.4e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++flanl HE+RTP+t+++g++elLl+ ++l+++q
AM743169_3 802 AKTRFLANLGHEIRTPMTGVLGMSELLLA---------SPLDPQQ-- 837

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r y+++i++++e+ll+Lind Ldl+rie+g
AM743169_3 838 ----------RGYTQSIRHAGEHLLHLINDALDLARIESG 867

AM743169_2113: domain 1 of 1, from 355 to 420: score 94.3, E = 2.5e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+flan+sHE+RTPL+++ g++e+L + t l++eq
AM743169_2 355 AKSRFLANMSHEFRTPLNGLAGMTEVLAT---------TRLDDEQ-- 390

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re l+ti+ ++++ll+L++++Ld+s ieag
AM743169_2 391 ----------RECLNTIQASTRSLLALVEEVLDISAIEAG 420

AM743169_0837: domain 1 of 1, from 471 to 536: score 93.8, E = 3.4e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHE+RTPL +++g++elL t+l++ q
AM743169_0 471 AKSQFLATMSHEIRTPLYGVLGTLELLGL---------TPLDARQ-- 506

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++yl ti+r++ l +Li+d+Ld s++eag
AM743169_0 507 ----------QDYLATIQRSSSTLMQLISDILDVSKAEAG 536

AM743169_4064: domain 1 of 1, from 74 to 139: score 90.6, E = 2.7e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+efla++sHE+RTPL++I+ ++el+ + ++l+e+q
AM743169_4 74 AKGEFLATMSHEIRTPLNGILPMLELIAR---------GPLGEDQ-- 109

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l t+ ++++llr+++d+Ld+sr+ea+
AM743169_4 110 ----------RQMLATASASSQQLLRIVDDILDYSRLEAQ 139

AM743169_0187: domain 1 of 1, from 715 to 780: score 88.7, E = 9.5e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHE+RTP+++++g++e+L ++l++eq
AM743169_0 715 AKSRFLATMSHEIRTPMSGVLGMLEVLAH---------SPLDAEQ-- 750

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l +i+++a+ l+++++d+Ld+sr+ea+
AM743169_0 751 ----------KRILGVIEDSAQMLRQILDDILDYSRLEAN 780

AM743169_2025: domain 1 of 1, from 364 to 432: score 84.5, E = 1.5e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHELRTPL++ + +a+lL + +d++l+eeq
AM743169_2 364 YKSEFLANMSHELRTPLNSSLILAKLLAD------NKDGTLTEEQ-- 402

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+y + il++ + ll+Lind+Ldlsrieag
AM743169_2 403 ----------VKYARAILSSNNDLLALINDILDLSRIEAG 432

AM743169_0839: domain 1 of 1, from 448 to 513: score 84.3, E = 1.7e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla++sHE+RTPL +++g++elL t l++ q
AM743169_0 448 AKSAFLATMSHEIRTPLYGVLGTLELLGH---------TSLDARQ-- 483

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+yl+ti++++ ll+Li+d+Ld s+ie+g
AM743169_0 484 ----------SQYLRTIESSSSVLLQLISDVLDVSKIESG 513

AM743169_0923: domain 1 of 1, from 210 to 274: score 79.8, E = 3.1e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+an+sHELRTPLt++ gy++++ ++ +
AM743169_0 210 VRRDFVANVSHELRTPLTVVHGYLDMMDP---------EDFPGTG-- 245

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+le ++++++r+ +L++dlL+lsr+e++
AM743169_0 246 -----------PMLEEMRKQSQRMAQLVEDLLTLSRLESQ 274

AM743169_3556: domain 1 of 1, from 243 to 309: score 74.7, E = 8.8e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +ef a++sHELRTPL++Irg++elLl+ ++ l+e+
AM743169_3 243 RDREFNADVSHELRTPLAVIRGATELLLT--------RPGLDEKV-- 279

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l++i+r+ +++++Li lL lsr e g
AM743169_3 280 ----------LQRLQRIQRAEQQCSDLIGALLLLSRNERG 309

AM743169_0564: domain 1 of 1, from 264 to 332: score 68.8, E = 4.1e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++e++an+sH+LRTPL+++ gy+e+L +d++ls+++r
AM743169_0 264 QRRELVANISHDLRTPLSSLHGYLETLAL-------KDATLSPDER- 302

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+yl ++l ++ rL + l +l+r+e+g
AM743169_0 303 ----------RRYLGIALAQSAKVGRLARALFELARLEHG 332

AM743169_4279: domain 1 of 1, from 209 to 274: score 66.6, E = 1.7e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++f+ ++sHELRTPL+aI+ ++lL+ ++s+ q
AM743169_4 209 AQGRFVGTMSHELRTPLNAIISGIQLLEV---------NTASAAQ-- 244

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +l t+ +a+ l+r i+d+Ld + i+ g
AM743169_4 245 ----------RHALATVAGQAQALRRRIDDVLDVASIDGG 274

AM743169_0386: domain 1 of 1, from 652 to 720: score 66.4, E = 2e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+s +l+++sH+LR PL+a++g a+ L ++ ++++ +r
AM743169_0 652 LRSALLSSVSHDLRSPLAAMIGSADSLASYG-------AAMDTADR- 690

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +l+til e+erl+r i++lLd++r++++
AM743169_0 691 ----------RALLDTILVEGERLDRYIQNLLDMTRLGHE 720

AM743169_3546: domain 1 of 1, from 315 to 381: score 66.2, E = 2.3e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++f a+l+HE+R+PL+aI +++lL+e+ t +e +
AM743169_3 315 AMGRFSASLAHEIRNPLAAINYAVQLLEEG--------TGFNESD-- 351

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l++i+++ +r + +++ +L l+r e
AM743169_3 352 ----------RRLLQIIRQQCQRTNGIVESVLGLARRERA 381

AM743169_4363: domain 1 of 1, from 782 to 848: score 65.1, E = 4.5e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++fla++sH+ +PL+a r++a++L++ +++ s+eq
AM743169_4 782 SKTRFLAAISHDVLQPLNAARLFASALRD--------SDHVSDEQ-- 818

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + e+++ +++ ++L++ lLd sr++ag
AM743169_4 819 ----------KHLAERVDASLRAAEELLDGLLDVSRLDAG 848

AM743169_0099: domain 1 of 1, from 432 to 497: score 64.9, E = 5.1e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak fla++sHE+RTP+++++g++e L+ ++l+ q
AM743169_0 432 AKAHFLATMSHEIRTPMSTLLGMLERLEG---------SDLDHRQ-- 467

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l t+ ++a+ l+++++d+L r++a
AM743169_0 468 ----------QQVLVTVGDAAQMLRQILDDVLHSQRLQAL 497

AM743169_2028: domain 1 of 1, from 155 to 222: score 63.7, E = 1.1e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++a l H+LRTPL+aI++ ++ L el +e ++
AM743169_2 155 LNETMAAVLTHDLRTPLSAILLCTDKLALEL-------PEDNAGA-- 192

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l+ ++ ++ r+ r++++lLd+sri++g
AM743169_2 193 ----------QQTLQYLEASTLRMARMVEQLLDFSRIRSG 222

AM743169_0540: domain 1 of 1, from 298 to 364: score 60.9, E = 7.2e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+efla+lsHELRTPLt+I+g +elLl + +
AM743169_0 298 LKDEFLATLSHELRTPLTTILGWSELLLQ---------RVDNTSPL- 334

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l++i ++a rLi+d+Ldls + g
AM743169_0 335 ----------YKGLNVIANSAGAQKRLISDMLDLSSMLLG 364

AM743169_4218: domain 1 of 1, from 245 to 309: score 59.8, E = 1.4e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ f+a++sHELRTPL+++r+ +e++++ + ++ +
AM743169_4 245 NRRAFIADISHELRTPLAVVRAELEAIED---------GIRPLDR-- 280

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l ++ e+++l +Li+dl dls ++g
AM743169_4 281 -----------ANLVGLQGEIRQLGKLIDDLHDLSMTQSG 309

AM743169_2556: domain 1 of 1, from 241 to 306: score 58.0, E = 4.7e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++f++n++H+LRTPL+a++ +e l+ ++ + q
AM743169_2 241 AQRRFVSNAAHQLRTPLAAMQVELESSLR---------QHDPQAQ-- 276

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l+ l + rl++L+n+lL lsr e +
AM743169_2 277 ----------QLALSGTLAGLARLQHLVNQLLMLSRSEDP 306

AM743169_2549: domain 1 of 1, from 236 to 302: score 57.3, E = 7.2e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ef +l+HELRTP+t +++ +++ l+ +++s e
AM743169_2 236 RLTEFSGDLAHELRTPITNMLTQVQVVLA---------HPRSNEA-- 271

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yre l + +e+++l + + dlL l+++ea+
AM743169_2 272 ---------YRETLASCAEELQQLAQTVGDLLYLAQAEAP 302

AM743169_3368: domain 1 of 1, from 213 to 279: score 55.2, E = 3e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + f++++sHELRTP++++ g+ael+le ++ +e +
AM743169_3 213 RERVFISTASHELRTPIAVMTGAAELALE---------QPGLPERA- 249

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ +++lr a++ ++Li+ lL l+r a
AM743169_3 250 ----------RQQMQRVLRTAQSVEQLIELLLVLARDPAR 279

AM743169_0760: domain 1 of 1, from 213 to 279: score 54.9, E = 3.6e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + f++++sHELRTPLt+Ir +++++l +e ++
AM743169_0 213 RERNFTRDASHELRTPLTVIRVASDMALG-------------DESLQ 246

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
p+L r+ l++i+r+++ +++ i+ +L l+r
AM743169_0 247 PRL-------RRSLQRIQRAGRDMEAVIDAFLILAREADV 279

AM743169_3729: domain 1 of 1, from 244 to 309: score 54.7, E = 4.1e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ f+a ++H++RTPL+a+r+ a+l+l+ + ++e++
AM743169_3 244 TLRAFMAEAAHQMRTPLAALRAQAQLALD----------DDDPEDM- 279

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l+ i+r a +++rL+n+lL + +
AM743169_3 280 ----------RRSLQAIERNATHMSRLLNQLLSDASVIHR 309

AM743169_1358: domain 1 of 1, from 258 to 323: score 54.6, E = 4.3e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ + +l HE++ PL+aIrg+aelL+e +l+e +r
AM743169_1 258 YVEQYVQSLTHEMKSPLAAIRGAAELLQE----------PLPEADR- 293

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++i ++ erl + i+ lL l+ e+
AM743169_1 294 ----------VHFARSIVDQQERLTETIDKLLALAEVEQH 323

AM743169_0149: domain 1 of 1, from 122 to 181: score 53.4, E = 9.5e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+s l +l+HELR+PL++++g+a+lL +++ + +++ +
AM743169_0 122 ALSAALKGLAHELRNPLAGLKGAAQLLARRA-------AQRDAGE-- 159

peLRledpeyreyletilreaerllrLindlL<-*
re++e i +e+erl+ L+++lL
AM743169_0 160 ----------RELIELIGSEIERLNGLLDQLL 181

AM743169_3726: domain 1 of 1, from 516 to 581: score 52.0, E = 2.3e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f+a++ H+L +PL+a r+++++L+ +ls++ +
AM743169_3 516 YKTRFVASAVHDLLQPLNAARMFVSVLRG----------KLSDPAQ- 551

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + i+ ++ ++++n lLd++r+e+g
AM743169_3 552 ----------QQTSDHIDAALAAQDAILNSLLDIARLESG 581

AM743169_3981: domain 1 of 1, from 227 to 284: score 50.9, E = 4.8e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +la+++H+LRTPLt++r+ ae + +
AM743169_3 227 DMTHMLAAVAHDLRTPLTGLRLRAEFAPT------------------ 255

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++er++ +i+++Ld++r e +
AM743169_3 256 -----------PQAARMVADIERMDTMIEQVLDYARGELQ 284

AM743169_3813: domain 1 of 1, from 366 to 434: score 47.6, E = 4.3e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f ++sH+LR PL + g+++ L + + +++ +++
AM743169_3 366 ELEAFSYSVSHDLRAPLRHVAGFSDKLSR-------HLGDAADDKS- 404

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r yl++i ++a+r+ +Li+dlL +sr++
AM743169_3 405 ----------RHYLDVISSSARRMAALIDDLLVYSRLGRA 434

AM743169_2504: domain 1 of 1, from 137 to 201: score 47.1, E = 5.9e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + a+++HELRTP+t +rg ++ + e+++ e ++eq
AM743169_2 137 NRVFWNAAIAHELRTPMTILRGRLQGIAEGVF-------EPGPEQ-- 174

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++l ++e l r+i+dl+ s +e+g
AM743169_2 175 -------------FNSMLTQLEGLTRIIEDLRVVSLAESG 201

AM743169_2253: domain 1 of 1, from 520 to 588: score 45.2, E = 2e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f ++sH+LR P I gy+elL + + l++ +
AM743169_2 520 ELEAFSYSVSHDLRAPFRHIVGYSELLGSSAG------ERLNDTE-- 558

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l+ti ++a++ L++dlL +s+++
AM743169_2 559 ----------RRFLDTIVESAKSAGTLVDDLLSFSQMGRS 588

AM743169_2851: domain 1 of 1, from 195 to 261: score 43.3, E = 6.6e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ L +I g +++Ll t e+ r
AM743169_2 195 AIGQLTGGVAHDFNNLLQVITGSVDMLLH---------TWPAEDAR- 231

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+y++ i+ +a+r rL +lL +sr ++
AM743169_2 232 ----------LRYVQAIETAADRATRLTAQLLAFSRRQSL 261

AM743169_1342: domain 1 of 1, from 238 to 303: score 43.3, E = 6.9e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+a+++H+LR PL+++ ++++ +l+ + +++++
AM743169_1 238 LQNRFIADAAHQLRSPLAGMALHVDQALA----------HGDPDTV- 273

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+l+ i+r +r r +lL lsr+++
AM743169_1 274 ----------REALQHIRRLNQRTARVSTQLLALSRAQTV 303

AM743169_3524: domain 1 of 1, from 208 to 273: score 42.7, E = 1e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++ ++sHELRTP++ + + ++l+++ + e r
AM743169_3 208 RQRDLTHAISHELRTPIARVAFGLDLMQD----------SDDRERR- 243

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ + ++ ++ l+rL+++lL ++r+e++
AM743169_3 244 ----------ERLARGLHGDLAELNRLVSELLAYERLEHP 273

AM743169_2514: domain 1 of 1, from 124 to 194: score 40.1, E = 5.5e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+e++ +++HE ++PL+aI ae+++++l ++ + +++
AM743169_2 124 TVGELTTSIAHEVNQPLAAIASSAEACQRWLA------QDPPNVDKA 164

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ + +il +a+r + i +++ l++ a+
AM743169_2 165 ----------RQTVARILADAHRAGDVIARIRGLTQGAAP 194

AM743169_2079: domain 1 of 1, from 138 to 202: score 39.8, E = 6.7e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ + a+++HELRTP+t +rg ++ L e + +++
AM743169_2 138 ERAMWHAAIAHELRTPVTILRGRLQGLAE---------GVFQPDE-- 173

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++l +e l+rLi+dl+ ls ++
AM743169_2 174 -----------SQFRSLLAHVEGLSRLIEDLRVLSLSDNA 202

AM743169_2452: domain 1 of 1, from 753 to 818: score 37.5, E = 3e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++fl ++ H+L +PL+a ++++e++ + +e +
AM743169_2 753 AKTRFLTAVGHDLIQPLHAAQLLTEAMSQ----------HIESEFL- 788

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+l+ i+ ++++ ++L++ lLd+sr+eag
AM743169_2 789 ----------DSFLRQIRGALDSTDDLLSGLLDISRLEAG 818

AM743169_2024: domain 1 of 1, from 144 to 211: score 37.2, E = 3.6e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +++ ++lsHE+++ Lt+I +++lL ++ + ++
AM743169_2 144 AVGRLSRGLSHEFNNLLTTIGNALDLLSLRV-------GGDDARA-- 181

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+l+ ++++++r L ++lL +s ++
AM743169_2 182 ----------AELLDAAQSATDRGALLTRQLLAFSTGQTL 211

AM743169_2651: domain 1 of 1, from 203 to 269: score 36.1, E = 7.4e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + f ++sHELRTPL+ I g+ae+L l+++ +l
AM743169_2 203 REQCFSGDASHELRTPLAIIGGAAETLAC----------QLPADSHL 239

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ilr ++ ++r++ lL lsr+ +
AM743169_2 240 ----------VPSAERILRTTQEMQRQLTFLLLLSRAPST 269

AM743169_0565: domain 1 of 1, from 220 to 274: score 34.6, E = 2e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++ +++HE RTPL+ +r+ + L++ t+l+e q
AM743169_0 220 SQRVLAQAVAHEVRTPLARMRFGLADLED---------TALDEIQ-- 255

peLRledpeyreyletilreaerllrLin<-*
r++l ++ +++rl++L +
AM743169_0 256 ----------RDALGGLRTDVDRLQHLTD 274

AM743169_1549: domain 1 of 1, from 237 to 295: score 34.2, E = 2.5e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++fla+++HELR P++++++ ++ L
AM743169_1 237 ARDKFLADAAHELRVPIAVVQARLSQLPQ------------------ 265

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ + +l ++ rl + + lLdl r++ +
AM743169_1 266 ----------GELKSQLLTDVARLGNVAEHLLDLQRLDRN 295

AM743169_2237: domain 1 of 1, from 306 to 371: score 33.1, E = 5.2e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+ + + +lsHE R+ a+++ ++lL + ++ q
AM743169_2 306 ARARAIGMLSHEVRNSAQAVLASIDLLSQ---------PSAPMGQ-- 341

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+l ++ ++ +l++L+n+ L++sr+ +g
AM743169_2 342 ----------REALAAAHAAGSSLRNLLNRSLEFSRLASG 371

AM743169_2251: domain 1 of 1, from 429 to 499: score 31.1, E = 2e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+I+g++e + + + + +
AM743169_2 429 AVGQLTGGIAHDFNNILTVISGNVEHAML------LNERAGEAGA-- 467

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++l+ +l+ + r +L ++lL ++r +
AM743169_2 468 --------MVSRALDNALKGVGRAASLTQRLLAFARRQPL 499

AM743169_3811: domain 1 of 1, from 151 to 216: score 28.1, E = 1.4e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s ++a+lsH+LR+ L ++ + +lL++ +++q+
AM743169_3 151 SLSLLAAGLSHDLRNILQPLLIMPDLLKA----------RTDDPQL- 186

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + ++i ++++r ++ + +L + r
AM743169_3 187 ----------HHLADVIAECGRRGHEMAESMLSFVRGSRK 216

AM743169_1457: domain 1 of 1, from 254 to 312: score 27.9, E = 1.5e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++la++ H+L TPLt +r+ +e +
AM743169_1 254 ERTQMLAAITHDLQTPLTRLRLRLENVSD------------------ 282

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + e+++ ++ +++L+++ L+l+r +
AM743169_1 283 ----------EVLRERLIGDLAAMQALVREGLELARSAES 312


Histogram of all scores:
score obs exp (one = represents 14 sequences)
----- --- ---
-14 6 0|=
-13 39 3|*==
-12 168 100|=======*====
-11 395 519|============================= *
-10 765 964|======================================================= *
-9 817 996|==========================================================*
-8 757 745|=====================================================*=
-7 565 470|=================================*=======
-6 348 270|===================*=====
-5 204 148|==========*====
-4 129 79|=====*====
-3 56 41|==*=
-2 34 22|=*=
-1 30 11|*==
0 10 6|*
1 6 3|*
2 4 1|*
3 1 0|=
4 0 0|
5 1 0|=
> 6 51 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 286.3462
P(chi-square) = 0

Total sequences searched: 4430

Whole sequence top hits:
tophits_s report:
Total hits: 44
Satisfying E cutoff: 44
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 44
Satisfying E cutoff: 44
Total memory: 38K


Acknowledgements:

This research is funded by:

Developed by: