Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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264 projects found  

1 accessions found for Xanthomonas campestris pv. campestris str. B100  

Data for AM920689  

Available Atlases
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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: AM920689.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
AM920689_2169 CDS_2480191-2482371 95.2 1.3e-26 1
AM920689_1836 CDS_2120991-2116897 91.6 1.4e-25 1
AM920689_1331 CDS_1524360-1528238 89.2 6.7e-25 1
AM920689_1329 CDS_1516986-1520546 87.7 1.8e-24 2
AM920689_1330 CDS_1520628-1524170 86.1 5.1e-24 1
AM920689_0517 CDS_563082-560779 84.0 2e-23 1
AM920689_3191 CDS_3595076-3598216 83.4 3.1e-23 1
AM920689_3426 CDS_3859192-3860535 80.7 1.7e-22 1
AM920689_3200 CDS_3609346-3608468 78.8 6e-22 1
AM920689_3564 CDS_3997708-3999618 76.0 3.7e-21 1
AM920689_1102 CDS_1240767-1242101 75.6 4.8e-21 1
AM920689_1115 CDS_1256825-1255215 67.9 7.5e-19 1
AM920689_3687 CDS_4132859-4130193 66.3 2.2e-18 1
AM920689_3868 CDS_4339454-4337346 65.2 4.5e-18 1
AM920689_4123 CDS_4617173-4618372 65.0 5e-18 1
AM920689_2053 CDS_2363294-2359854 64.1 8.9e-18 1
AM920689_4319 CDS_4842642-4839199 63.6 1.2e-17 1
AM920689_2361 CDS_2721556-2720285 61.8 4.1e-17 1
AM920689_3609 CDS_4042387-4041116 58.1 4.5e-16 1
AM920689_0211 CDS_241334-242383 57.2 8.2e-16 1
AM920689_3194 CDS_3599618-3600742 53.0 1.3e-14 1
AM920689_0865 CDS_966611-963966 51.3 3.8e-14 1
AM920689_0861 CDS_959737-961122 49.4 1.3e-13 1
AM920689_1490 CDS_1691147-1692595 45.6 1.6e-12 1
AM920689_0772 CDS_860040-861851 45.1 2.1e-12 1
AM920689_1452 CDS_1645374-1646750 44.9 2.4e-12 1
AM920689_3257 CDS_3667721-3666438 44.6 3e-12 1
AM920689_1592 CDS_1808298-1806391 44.1 4.1e-12 1
AM920689_2639 CDS_3021286-3018452 38.2 2e-10 1
AM920689_1762 CDS_2005750-2008563 37.4 3.4e-10 1
AM920689_4403 CDS_4942367-4943614 35.9 8.7e-10 1
AM920689_2636 CDS_3016408-3014306 35.7 9.7e-10 1
AM920689_3190 CDS_3595045-3593756 30.1 3.9e-08 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
AM920689_2169 1/1 188 253 .. 1 87 [] 95.2 1.3e-26
AM920689_1836 1/1 643 708 .. 1 87 [] 91.6 1.4e-25
AM920689_1331 1/1 921 986 .. 1 87 [] 89.2 6.7e-25
AM920689_1329 1/2 807 872 .. 1 87 [] 87.4 2.2e-24
AM920689_1330 1/1 807 872 .. 1 87 [] 86.1 5.1e-24
AM920689_0517 1/1 110 175 .. 1 87 [] 84.0 2e-23
AM920689_3191 1/1 365 433 .. 1 87 [] 83.4 3.1e-23
AM920689_3426 1/1 214 278 .. 1 87 [] 80.7 1.7e-22
AM920689_3200 1/1 57 125 .. 1 87 [] 78.8 6e-22
AM920689_3564 1/1 275 340 .. 1 87 [] 76.0 3.7e-21
AM920689_1102 1/1 235 301 .. 1 87 [] 75.6 4.8e-21
AM920689_1115 1/1 314 380 .. 1 87 [] 67.9 7.5e-19
AM920689_3687 1/1 654 722 .. 1 87 [] 66.3 2.2e-18
AM920689_3868 1/1 322 388 .. 1 87 [] 65.2 4.5e-18
AM920689_4123 1/1 169 234 .. 1 87 [] 65.0 5e-18
AM920689_2053 1/1 761 827 .. 1 87 [] 64.1 8.9e-18
AM920689_4319 1/1 783 849 .. 1 87 [] 63.6 1.2e-17
AM920689_2361 1/1 177 242 .. 1 87 [] 61.8 4.1e-17
AM920689_3609 1/1 213 279 .. 1 87 [] 58.1 4.5e-16
AM920689_0211 1/1 120 187 .. 1 87 [] 57.2 8.2e-16
AM920689_3194 1/1 156 222 .. 1 87 [] 53.0 1.3e-14
AM920689_0865 1/1 516 581 .. 1 87 [] 51.3 3.8e-14
AM920689_0861 1/1 242 307 .. 1 87 [] 49.4 1.3e-13
AM920689_1490 1/1 258 323 .. 1 87 [] 45.6 1.6e-12
AM920689_0772 1/1 368 436 .. 1 87 [] 45.1 2.1e-12
AM920689_1452 1/1 248 313 .. 1 87 [] 44.9 2.4e-12
AM920689_3257 1/1 212 278 .. 1 87 [] 44.6 3e-12
AM920689_1592 1/1 417 483 .. 1 87 [] 44.1 4.1e-12
AM920689_2639 1/1 565 633 .. 1 87 [] 38.2 2e-10
AM920689_1762 1/1 564 632 .. 1 87 [] 37.4 3.4e-10
AM920689_4403 1/1 182 247 .. 1 87 [] 35.9 8.7e-10
AM920689_2636 1/1 326 394 .. 1 87 [] 35.7 9.7e-10
AM920689_3190 1/1 197 263 .. 1 87 [] 30.1 3.9e-08

Alignments of top-scoring domains:
AM920689_2169: domain 1 of 1, from 188 to 253: score 95.2, E = 1.3e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+flan+sHE+RTPL++++g++e+L + t l++eq
AM920689_2 188 AKSRFLANMSHEFRTPLNGLSGMTEVLAT---------TRLDAEQ-- 223

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e l+ti+ +a++ll+L++++Ld+s ieag
AM920689_2 224 ----------KECLNTIQASARSLLSLVEEVLDISAIEAG 253

AM920689_1836: domain 1 of 1, from 643 to 708: score 91.6, E = 1.4e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks+flan+sHE+RTP++aI+g++ lL++ +el+
AM920689_1 643 SKSDFLANMSHEIRTPMNAILGMLYLLQR---------SELPGAA-- 678

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++ +i+r+a++ll++ind+Ld+s+ieag
AM920689_1 679 ----------QDMVTKIDRSARSLLEIINDILDFSKIEAG 708

AM920689_1331: domain 1 of 1, from 921 to 986: score 89.2, E = 6.7e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++fla+l HE RTP+t+++g++elLl+ t l+ +q
AM920689_1 921 AKTRFLATLGHEVRTPMTGVLGMSELLLK---------TQLDHKQ-- 956

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r y+e+i+r++ +llrL+nd Ldl+rie+g
AM920689_1 957 ----------RSYTESIRRAGSHLLRLVNDALDLARIESG 986

AM920689_1329: domain 1 of 2, from 807 to 872: score 87.4, E = 2.2e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++fla+l HE RTP+t+++g++elLl t+l+ q
AM920689_1 807 AKTRFLATLGHEVRTPMTGVLGMSELLLQ---------TPLDGRQ-- 842

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ y + i++++++llrL+nd Ldl+rieag
AM920689_1 843 ----------QGYASAIQSAGKHLLRLVNDALDLARIEAG 872

AM920689_1330: domain 1 of 1, from 807 to 872: score 86.1, E = 5.1e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla+l HE RTP+t+++g++elLl+ t+l+++q
AM920689_1 807 AKSNFLATLGHEVRTPMTGVLGMSELLLA---------TPLDAKQ-- 842

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r ++ i++++ +llrL+nd Ldl+rieag
AM920689_1 843 ----------RGHVDAIRKAGAHLLRLVNDALDLARIEAG 872

AM920689_0517: domain 1 of 1, from 110 to 175: score 84.0, E = 2e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+efla++sHE+RTPL++I+ ++el+ + + ls +q
AM920689_0 110 AKGEFLATMSHEIRTPLNGIIPMLELISR---------GQLSLDQ-- 145

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l+t+ ++ +llr+++d+Ld+s++ea+
AM920689_0 146 ----------RDMLQTATGSSLQLLRIVDDILDYSKLEAN 175

AM920689_3191: domain 1 of 1, from 365 to 433: score 83.4, E = 3.1e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHELRTPL++ + +a+lL + +d++l++eq
AM920689_3 365 YKSEFLANMSHELRTPLNSSLILAKLLAD------NKDHTLTAEQ-- 403

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+y + i+++ + ll+Lind+Ldls+ieag
AM920689_3 404 ----------VKYAQAIHSSNNDLLALINDILDLSKIEAG 433

AM920689_3426: domain 1 of 1, from 214 to 278: score 80.7, E = 1.7e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+an+sHELRTPLt++ gy+++L ++ ++
AM920689_3 214 VRRDFVANVSHELRTPLTVVHGYLDMLDP---------EDFPDSG-- 249

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+l ++++++r+ +L++dlL+lsr+e++
AM920689_3 250 -----------PMLAEMRKQSQRMAQLVEDLLTLSRLESQ 278

AM920689_3200: domain 1 of 1, from 57 to 125: score 78.8, E = 6e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+fl+++sHE+RTPL +I+ + lL++++d ++l++eq
AM920689_3 57 LKSRFLSYMSHEFRTPLGSILSITRLLEDGMD------GPLNAEQ-- 95

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++ + +++ l+++++dlLdl++ieag
AM920689_3 96 ----------LKQVRFVSASTRELSEMVDDLLDLAKIEAG 125

AM920689_3564: domain 1 of 1, from 275 to 340: score 76.0, E = 3.7e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+efl+ sHELRTPL+aI+gya++L++ +l+e+ +
AM920689_3 275 AKTEFLSRSSHELRTPLNAILGYAQVLEM----------DLPEPGH- 310

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l+ il ++++ll Li +lLd++riea
AM920689_3 311 ----------RRHLQHILGAGRHLLGLITELLDIARIEAD 340

AM920689_1102: domain 1 of 1, from 235 to 301: score 75.6, E = 4.8e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +ef a++sHELRTPL++Irg++elLl+ ++l+e+
AM920689_1 235 RDREFNADVSHELRTPLAVIRGATELLLT--------KPNLDEKV-- 271

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l++i+r+ +++++Li lL lsr e g
AM920689_1 272 ----------LQRLQRIQRAEQQCSDLIGSLLLLSRNERG 301

AM920689_1115: domain 1 of 1, from 314 to 380: score 67.9, E = 7.5e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++f a+l+HE+R+PL+aI +++lL+e +++ ++ +
AM920689_1 314 AMGRFSASLAHEIRNPLAAINYASQLLEE--------SPDIGDAD-- 350

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l++i+++ +r + +++ +L l+r e
AM920689_1 351 ----------RRLLQIIHQQCQRTNGIVESVLGLARRERA 380

AM920689_3687: domain 1 of 1, from 654 to 722: score 66.3, E = 2.2e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+s +l+++sH+LR PL++++g a+ L e++ +++++ +r
AM920689_3 654 LRSALLSSVSHDLRSPLASMIGSASSLAEYG-------EAMDATDR- 692

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +leti+ e+erl+r i++lLd++r+++
AM920689_3 693 ----------RSLLETIQLEGERLDRYIQNLLDMTRLGHT 722

AM920689_3868: domain 1 of 1, from 322 to 388: score 65.2, E = 4.5e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+efla+lsHELRTPLt+I+g +elLl +++ +++ + +
AM920689_3 322 LKDEFLATLSHELRTPLTTILGWSELLLQRVE-----EGHPNYKG-- 361

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l++i ++a+ rLi+d+Ldls + g
AM920689_3 362 -------------LSVIASSARAQKRLISDMLDLSSMLLG 388

AM920689_4123: domain 1 of 1, from 169 to 234: score 65.0, E = 5e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++f+a+++HELRTPL+a+ +yae++l+ t+l +++
AM920689_4 169 AERDFVADAAHELRTPLSALHAYAEVALR--------ATTLESKD-- 205

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+l+++l+ a+r +rL ++lLdl+r++ag
AM920689_4 206 -----------AALQRLLETARRSNRLAEQLLDLARLDAG 234

AM920689_2053: domain 1 of 1, from 761 to 827: score 64.1, E = 8.9e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+efla+lsHELRTPL+aI+g + l+++ ++ + ++
AM920689_2 761 VKDEFLATLSHELRTPLNAILGWSRLMQA---------DAFEPAKL- 797

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l +i+r+a+ ++i+dlLd+s i +g
AM920689_2 798 ----------GKGLVVIERSARAQTQIIDDLLDMSAILSG 827

AM920689_4319: domain 1 of 1, from 783 to 849: score 63.6, E = 1.2e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++fla++sH+ +PL+a r++a++L+e ++++ e++
AM920689_4 783 SKTRFLAAISHDVLQPLNAARLFASALRE---------SHQNNEEQ- 819

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r + e+++ +++ ++L++ lLd sr++ag
AM920689_4 820 ----------RHLAERVDASLRAAEELLDGLLDVSRLDAG 849

AM920689_2361: domain 1 of 1, from 177 to 242: score 61.8, E = 4.1e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+a l H+LR PL +I++++e+L+ +++s+
AM920689_2 177 LRDQFIAVLGHDLRSPLQSISMATEMLQL---------EPQSPRG-- 212

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l i+ ++ r+ L++d+Ld++r + g
AM920689_2 213 ----------ASLLGHIRTSLTRIGGLVDDVLDFARGRLG 242

AM920689_3609: domain 1 of 1, from 213 to 279: score 58.1, E = 4.5e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + f++++sHELRTPLt+Ir +++++l+ d+el + +
AM920689_3 213 RERNFTRDASHELRTPLTVIRVASDMALA--------DEELAPRT-- 249

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l++i+r+++ +++ i+ +L l+r +
AM920689_3 250 ----------QRSLRRIQRAGRDMEAVIDAFLILAREAEI 279

AM920689_0211: domain 1 of 1, from 120 to 187: score 57.2, E = 8.2e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+s l +l+HELR+PL++++g+a+lL +++ + ++e++
AM920689_0 120 ALSAALKGLAHELRNPLAGLKGAAQLLARRA-------AGRDEDE-- 157

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re++e i e+erl+ L+++lL s ++
AM920689_0 158 ----------RELIELIGTEIERLNTLLERLLSPSPLRPH 187

AM920689_3194: domain 1 of 1, from 156 to 222: score 53.0, E = 1.3e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++a l H+LRTPL++I++ a+ L + + +
AM920689_3 156 LNETMMAVLTHDLRTPLSVILLCADKLGL---------DVPEDGSA- 192

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ le ++++a+r+ r++++lLd+sr+++
AM920689_3 193 ----------ARTLEHLENSARRMARMVEQLLDFSRLRTD 222

AM920689_0865: domain 1 of 1, from 516 to 581: score 51.3, E = 3.8e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f+a++ H+L +PL+a r+++++L+ +
AM920689_0 516 YKTRFVASAVHDLLQPLNAARMFVSVLRG---------QVHATGS-- 551

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++ i+ ++ ++++n lLd+sr+eag
AM920689_0 552 ----------AQLVDNIDGALAAQDAILNSLLDISRLEAG 581

AM920689_0861: domain 1 of 1, from 242 to 307: score 49.4, E = 1.3e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ f+a ++H++RTPL+a+r+ a+l+ + + ++ ++
AM920689_0 242 TLRAFMAEAAHQMRTPLAALRAQAQLAMD----------DDDPRDM- 277

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l i+r a +++rL+n+lL + +
AM920689_0 278 ----------QRSLVAIERNASHMSRLLNQLLSDASVIHR 307

AM920689_1490: domain 1 of 1, from 258 to 323: score 45.6, E = 1.6e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + +l HE++ PL+aIrg++elL e +l+e +r
AM920689_1 258 YVEHYVQSLTHEMKSPLAAIRGASELLTE----------PLPECDR- 293

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++ +i+ + +rl + i+ lL l+ e+
AM920689_1 294 ----------QHFVASIRAQEQRLTETIDKLLALAEVEQH 323

AM920689_0772: domain 1 of 1, from 368 to 436: score 45.1, E = 2.1e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f ++sH+LR PL + g+++ L + + +++ +e+
AM920689_0 368 ELEAFSYSVSHDLRAPLRHVAGFSDKLAR-------HLGDAADEKS- 406

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r y e+i ++a+r+ +Li+dlL +sr++
AM920689_0 407 ----------RHYMEVISSSARRMASLIDDLLVYSRLGRS 436

AM920689_1452: domain 1 of 1, from 248 to 313: score 44.9, E = 2.4e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + +l + HE+RTPL++I+g+a++L + + l+e
AM920689_1 248 RERSLLDQANHEFRTPLAVISGAADVLHK---------QQLPERA-- 283

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l++i+++++ l r+ + lL lsr ++
AM920689_1 284 ----------QGPLHRIDEAVDNLTRIMEALLYLSRESTP 313

AM920689_3257: domain 1 of 1, from 212 to 278: score 44.6, E = 3e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + f+ ++sHELRTP+++I +ael+le ++ ++ +
AM920689_3 212 RERAFIDSASHELRTPIAVIGNAAELALE---------QPDTPAVV- 248

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r l++i + + ++Li lL l++
AM920689_3 249 ----------RHQLQRIAQTSGAVEQLITLLLVLAKDPGR 278

AM920689_1592: domain 1 of 1, from 417 to 483: score 44.1, E = 4.1e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + ++a+++HE R+PL +I+ +++++++ t +
AM920689_1 417 AVGALMAGVAHEVRNPLFGISSTLDAMEA---------TFNTGRSG- 453

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ e+++re++rl++L dlL++ r ++
AM920689_1 454 ----------GRHQEVLRREVRRLNKLMTDLLEYGRPPTE 483

AM920689_2639: domain 1 of 1, from 565 to 633: score 38.2, E = 2e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +l+H++++ LtaI+ +elL++ + +++ +rl
AM920689_2 565 AVGQLTGGLAHDFNNLLTAISVGLELLQT--------RIAQGRYDRL 603

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y+e ++++a r +L ++lL +sr ++
AM920689_2 604 ----------ERYVEMAQSSAARAAALTQRLLAFSRRQTL 633

AM920689_1762: domain 1 of 1, from 564 to 632: score 37.4, E = 3.4e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +l+H++++ Lt+I+g +el+++++ g + ++ +
AM920689_1 564 AVGQLTGGLAHDFNNLLTGISGSLELMQTRM-----GQGRFDDVE-- 603

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+ +++++a r +L +lL +sr ++
AM920689_1 604 -----------CYIAVAQKAAGRAAALTHRLLAFSRRQTL 632

AM920689_4403: domain 1 of 1, from 182 to 247: score 35.9, E = 8.7e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ef+ l H+LR+PL ++ + +++L + ls q
AM920689_4 182 LREEFIGILGHDLRNPLQSMHAVVDMLSI---------DQLSQRQ-- 217

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++++r+++r+++Li+ d++r +
AM920689_4 218 ----------GGAIRSLQRSLRRMEELIDFASDFARGIER 247

AM920689_2636: domain 1 of 1, from 326 to 394: score 35.7, E = 9.7e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+I+ +++l++ + d + +se
AM920689_2 326 AVGQLTGGIAHDFNNMLTGILSALDLARLRID------QGRSEGL-- 364

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l+++ +a r +L ++lL +sr ++
AM920689_2 365 ----------GRFLDVASASALRAAALTQRLLAFSRRQSL 394

AM920689_3190: domain 1 of 1, from 197 to 263: score 30.1, E = 3.9e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++++ +l+H++++ Lt++ + ++l+ ++ ++ +
AM920689_3 197 ALGRLTLGLAHDFNNLLTVMVTSLDLIAL--------RAGEDART-- 233

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r ++e ++ +++r L ++lL ++r +
AM920689_3 234 ----------RMLVEAAQTAVDRGTLLTRQLLAFARGQRL 263


Histogram of all scores:
score obs exp (one = represents 15 sequences)
----- --- ---
-14 16 0|==
-13 65 3|*====
-12 211 102|======*========
-11 397 529|=========================== *
-10 698 982|=============================================== *
-9 860 1014|==========================================================*
-8 739 759|==================================================*
-7 585 478|===============================*=======
-6 373 275|==================*======
-5 191 151|==========*==
-4 140 80|=====*====
-3 69 42|==*==
-2 28 22|=*
-1 26 11|*=
0 12 6|*
1 6 3|*
> 2 51 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 408.2545
P(chi-square) = 0

Total sequences searched: 4513

Whole sequence top hits:
tophits_s report:
Total hits: 33
Satisfying E cutoff: 33
Total memory: 21K

Domain top hits:
tophits_s report:
Total hits: 33
Satisfying E cutoff: 33
Total memory: 34K


Acknowledgements:

This research is funded by:

Developed by: