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Classification of phyla is from NCBI page
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25 projects found  

1 accessions found for Gemmatimonas aurantiaca T-27  

Data for AP009153  

Available Atlases
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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: AP009153.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
AP009153_2360 CDS_2763040-2764479 101.9 1.5e-28 1
AP009153_1860 CDS_2176935-2174698 89.7 4.2e-25 1
AP009153_2866 CDS_3370912-3367826 85.2 8.3e-24 1
AP009153_0200 CDS_242684-240054 80.0 2.4e-22 1
AP009153_3843 CDS_4523230-4524783 78.8 5.2e-22 1
AP009153_2880 CDS_3386580-3388118 74.4 9.2e-21 1
AP009153_3137 CDS_3701527-3700037 73.5 1.7e-20 1
AP009153_0389 CDS_440140-441411 70.6 1.1e-19 1
AP009153_1435 CDS_1722963-1721701 70.0 1.7e-19 1
AP009153_1000 CDS_1178880-1175863 68.6 4.1e-19 1
AP009153_2191 CDS_2566260-2567735 62.6 2e-17 1
AP009153_2012 CDS_2344165-2342651 60.7 7.1e-17 1
AP009153_2888 CDS_3396857-3397993 59.4 1.7e-16 1
AP009153_0979 CDS_1156188-1157804 56.9 8.6e-16 1
AP009153_1004 CDS_1183349-1181358 56.1 1.4e-15 1
AP009153_2015 CDS_2347757-2346255 54.6 3.9e-15 1
AP009153_3284 CDS_3892469-3891180 50.8 4.6e-14 1
AP009153_2526 CDS_2960984-2959314 49.0 1.4e-13 1
AP009153_2522 CDS_2956543-2955476 48.9 1.6e-13 1
AP009153_2543 CDS_2978749-2977127 47.9 3e-13 1
AP009153_2787 CDS_3281973-3283109 47.4 4.1e-13 1
AP009153_3192 CDS_3777568-3779637 44.6 2.6e-12 1
AP009153_0207 CDS_252176-249756 44.6 2.6e-12 1
AP009153_1026 CDS_1208158-1210365 43.1 6.8e-12 1
AP009153_0519 CDS_602725-604659 41.4 2.1e-11 1
AP009153_2669 CDS_3137335-3139470 39.9 5.7e-11 1
AP009153_3229 CDS_3825002-3828943 37.4 2.9e-10 1
AP009153_0767 CDS_921351-924269 37.1 3.4e-10 1
AP009153_1444 CDS_1737456-1739564 35.0 1.4e-09 1
AP009153_0652 CDS_772728-771523 34.1 2.5e-09 1
AP009153_3262 CDS_3867199-3869424 33.2 4.5e-09 1
AP009153_2617 CDS_3072060-3070669 33.0 5e-09 1
AP009153_1742 CDS_2066740-2064083 32.6 6.4e-09 1
AP009153_0577 CDS_678902-678054 32.2 8.6e-09 1
AP009153_0839 CDS_1004786-1008097 31.4 1.4e-08 1
AP009153_3088 CDS_3638637-3636553 30.7 2.2e-08 1
AP009153_1340 CDS_1605665-1608253 29.5 4.9e-08 1
AP009153_0610 CDS_726311-730255 27.3 2.1e-07 1
AP009153_3592 CDS_4226602-4228464 27.0 2.5e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
AP009153_2360 1/1 245 311 .. 1 87 [] 101.9 1.5e-28
AP009153_1860 1/1 156 221 .. 1 87 [] 89.7 4.2e-25
AP009153_2866 1/1 528 597 .. 1 87 [] 85.2 8.3e-24
AP009153_0200 1/1 658 723 .. 1 87 [] 80.0 2.4e-22
AP009153_3843 1/1 283 350 .. 1 87 [] 78.8 5.2e-22
AP009153_2880 1/1 266 333 .. 1 87 [] 74.4 9.2e-21
AP009153_3137 1/1 267 333 .. 1 87 [] 73.5 1.7e-20
AP009153_0389 1/1 192 260 .. 1 87 [] 70.6 1.1e-19
AP009153_1435 1/1 186 253 .. 1 87 [] 70.0 1.7e-19
AP009153_1000 1/1 631 697 .. 1 87 [] 68.6 4.1e-19
AP009153_2191 1/1 253 321 .. 1 87 [] 62.6 2e-17
AP009153_2012 1/1 254 320 .. 1 87 [] 60.7 7.1e-17
AP009153_2888 1/1 153 213 .. 1 87 [] 59.4 1.7e-16
AP009153_0979 1/1 308 375 .. 1 87 [] 56.9 8.6e-16
AP009153_1004 1/1 300 372 .. 1 87 [] 56.1 1.4e-15
AP009153_2015 1/1 268 337 .. 1 87 [] 54.6 3.9e-15
AP009153_3284 1/1 219 285 .. 1 87 [] 50.8 4.6e-14
AP009153_2526 1/1 313 383 .. 1 87 [] 49.0 1.4e-13
AP009153_2522 1/1 85 151 .. 1 87 [] 48.9 1.6e-13
AP009153_2543 1/1 314 386 .. 1 87 [] 47.9 3e-13
AP009153_2787 1/1 148 208 .. 1 87 [] 47.4 4.1e-13
AP009153_3192 1/1 321 387 .. 1 87 [] 44.6 2.6e-12
AP009153_0207 1/1 431 497 .. 1 87 [] 44.6 2.6e-12
AP009153_1026 1/1 363 429 .. 1 87 [] 43.1 6.8e-12
AP009153_0519 1/1 267 335 .. 1 87 [] 41.4 2.1e-11
AP009153_2669 1/1 353 419 .. 1 87 [] 39.9 5.7e-11
AP009153_3229 1/1 948 1014 .. 1 87 [] 37.4 2.9e-10
AP009153_0767 1/1 597 663 .. 1 87 [] 37.1 3.4e-10
AP009153_1444 1/1 324 403 .. 1 87 [] 35.0 1.4e-09
AP009153_0652 1/1 176 240 .. 1 87 [] 34.1 2.5e-09
AP009153_3262 1/1 363 429 .. 1 87 [] 33.2 4.5e-09
AP009153_2617 1/1 228 304 .. 1 87 [] 33.0 5e-09
AP009153_1742 1/1 526 592 .. 1 87 [] 32.6 6.4e-09
AP009153_0577 1/1 65 124 .. 10 87 .] 32.2 8.6e-09
AP009153_0839 1/1 854 928 .. 1 87 [] 31.4 1.4e-08
AP009153_3088 1/1 325 390 .. 1 87 [] 30.7 2.2e-08
AP009153_1340 1/1 490 556 .. 1 87 [] 29.5 4.9e-08
AP009153_0610 1/1 916 975 .. 1 80 [. 27.3 2.1e-07
AP009153_3592 1/1 250 316 .. 1 87 [] 27.0 2.5e-07

Alignments of top-scoring domains:
AP009153_2360: domain 1 of 1, from 245 to 311: score 101.9, E = 1.5e-28
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+an+sHELRTPLt+I g++e+L++ + l++e r
AP009153_2 245 VRRDFVANVSHELRTPLTVIGGFVETLQD---------EQLPPELR- 281

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l+ ++ +++r++r+++dlLdlsrie+g
AP009153_2 282 ----------TQFLQMVDASVRRMQRIVDDLLDLSRIESG 311

AP009153_1860: domain 1 of 1, from 156 to 221: score 89.7, E = 4.2e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks flan+sHE+RTP++aI+g++elLl ++l+ q
AP009153_1 156 AKSTFLANMSHEIRTPMNAIIGFTELLLQ---------SDLTTTQ-- 191

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r l+t+++++++ll Lind+Ld +r+e g
AP009153_1 192 ----------RNHLSTVRQSSRSLLGLINDILDTTRLEKG 221

AP009153_2866: domain 1 of 1, from 528 to 597: score 85.2, E = 8.3e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+kseflan+sHE+RTPLtaI+g+++lL+ee+ + + ++
AP009153_2 528 SKSEFLANMSHEIRTPLTAILGHTDLLREEA------VRSAAPRDQ- 567

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ leti+r++e+ll +nd+Ld+srieag
AP009153_2 568 ----------VQGLETIQRAGEHLLTVLNDILDISRIEAG 597

AP009153_0200: domain 1 of 1, from 658 to 723: score 80.0, E = 2.4e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +e++a+++HE+++PLt+I+++a+lLle ++l+++q
AP009153_0 658 AVGELVAGVAHEINNPLTGISAFAQLLLE---------ETLTDDQ-- 693

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re + i++e++r i dlL ++r +
AP009153_0 694 ----------RESVALIKKETDRAKGVIHDLLLFARNTER 723

AP009153_3843: domain 1 of 1, from 283 to 350: score 78.8, E = 5.2e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+a++sHELRTP++ Irg a++ l+ +t+++e +
AP009153_3 283 TQRQFVADASHELRTPIAIIRGEADVTLR--------RTARTEAE-- 319

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yre+l++i+ e+ rl r+++dl l+r +ag
AP009153_3 320 ---------YREALSVIQGESIRLTRIVEDLFLLARVDAG 350

AP009153_2880: domain 1 of 1, from 266 to 333: score 74.4, E = 9.2e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+a++sHELRTP++ +++ a+++l+ ++++see+
AP009153_2 266 QQRQFVADASHELRTPVAILQAEADVALA--------RAARSEEE-- 302

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yr+++ ++ ++++rl+r+++dl l+r ++g
AP009153_2 303 ---------YRQAIGVMSSASQRLSRIVDDLFLLARVDSG 333

AP009153_3137: domain 1 of 1, from 267 to 333: score 73.5, E = 1.7e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+a++sHELRTP++ ++g +el+l +++s++q
AP009153_3 267 QRRRFTADASHELRTPVAIVIGESELALS---------SDRSADQ-- 302

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yr +l++i+ ea+rl +++ dl l+r +
AP009153_3 303 ---------YRSALRIIHGEARRLASIVGDLFLLARRDGA 333

AP009153_0389: domain 1 of 1, from 192 to 260: score 70.6, E = 1.1e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ +la+lsHELRTPLta+ gy elL++ + ++ls eq
AP009153_0 192 AKTSLLATLSHELRTPLTALEGYGELLED------EILGPLSHEQ-- 230

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ + +++ +++l +Li+d+L+++ +ea
AP009153_0 231 ----------RDVITRLRTVGRHLGSLIEDILTYASLEAD 260

AP009153_1435: domain 1 of 1, from 186 to 253: score 70.0, E = 1.7e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s f++++sHELRTPL+ I+++ae+L+ g++ + +
AP009153_1 186 QRSAFASTVSHELRTPLAQILLFAETLQL-------GRARTTGDR-- 223

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l i +e++rl rL++++L ++r+e+g
AP009153_1 224 ----------ELALGAIVQETRRLMRLVDNVLRFTRLEQG 253

AP009153_1000: domain 1 of 1, from 631 to 697: score 68.6, E = 4.1e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+efla+l+HELR+PL+ +r +e+L+ ++ s+e +
AP009153_1 631 RKDEFLATLAHELRNPLAPLRNGVEILRL---------AAPSPEII- 667

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++r++ +l rL++dlLd sri +g
AP009153_1 668 ----------ERTRGMMERQLGQLVRLVDDLLDVSRITSG 697

AP009153_2191: domain 1 of 1, from 253 to 321: score 62.6, E = 2e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+ef++n+sH+L+ PL+++r +++lLl+e+ ++l + q
AP009153_2 253 MKREFVSNVSHDLKSPLASLRETTSLLLDEV------PGPLRDSQ-- 291

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l +++a+rl +i lLdlsrieag
AP009153_2 292 ----------RRVLLLQRESADRLGVMIAKLLDLSRIEAG 321

AP009153_2012: domain 1 of 1, from 254 to 320: score 60.7, E = 7.1e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++f+a++sHEL+TPL++Ir+ +e + ++ +e ++
AP009153_2 254 ALRRFTADASHELKTPLAVIRADVERAIS---------PTTNETEQ- 290

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +le +l+++ r+ +L++ lL+l+r+++g
AP009153_2 291 ----------AIALEEALQQVTRMADLVDSLLTLARADEG 320

AP009153_2888: domain 1 of 1, from 153 to 213: score 59.4, E = 1.7e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ +la++sH+LRTPLt+Irg+a+ + +++
AP009153_2 153 LKDALLATVSHDLRTPLTTIRGLAHDIVRDG---------------- 183

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ i++e+erl+rL+ dlLdlsr+ ag
AP009153_2 184 ----------DDRALAIEEEVERLNRLVTDLLDLSRLKAG 213

AP009153_0979: domain 1 of 1, from 308 to 375: score 56.9, E = 8.6e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ f++++sHELRTPLt Ir+yae+L+ + l++ +
AP009153_0 308 LRATFVSSVSHELRTPLTQIRLYAEMLRL---------GLLPAVADA 345

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l++i++ea+rl+ L+++ L++ r+++
AP009153_0 346 ----------SRALSIIEKEADRLSILVERSLTFVRAGTV 375

AP009153_1004: domain 1 of 1, from 300 to 372: score 56.1, E = 1.4e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++a+l+HEL++PL+++++ +elL ++l e +++++
AP009153_1 300 AIGRMTAGLAHELNNPLATVLASSELLATRL-------NENDPPTME 339

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e++e ++rea+r + L++ lL+++r ++
AP009153_1 340 QLS-------VEFVEPMRREAQRARLLVRSLLQFARRGES 372

AP009153_2015: domain 1 of 1, from 268 to 337: score 54.6, E = 3.9e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++++a++ HE+++PL++I + ae + +el++ ++
AP009153_2 268 ALGQLAAGVMHEINNPLATIAACAESMSL--------QQELGPGAAP 306

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
p e+l++i+ e++r+ +++n lLd+sr +
AP009153_2 307 P---------TELLRIIDLEVQRCKKIVNGLLDFSRPKTA 337

AP009153_3284: domain 1 of 1, from 219 to 285: score 50.8, E = 4.6e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +ef++++sHELRTP++++r +++lL + d++l++
AP009153_3 219 REREFVSGASHELRTPISVVRSASDLLMR--------DPALPDSA-- 255

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++ ++ +l++ lL l+r e+
AP009153_3 256 ----------VVHVQRVHTASLQLEETTAALLALAREEEA 285

AP009153_2526: domain 1 of 1, from 313 to 383: score 49.0, E = 1.4e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkv.lagdtelseeqr
a e+ a+l+HE+R+PL++Ir ++e L + ++++ ++ ++e +
AP009153_2 313 AVAELSASLAHEIRNPLASIRSATEQLAR----RrSLQVDADDDERI 355

lpeLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l + rea+rl+rL+ d+Ld++r++
AP009153_2 356 L-------------HGLVVREADRLSRLLADFLDFARARVT 383

AP009153_2522: domain 1 of 1, from 85 to 151: score 48.9, E = 1.6e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +a++sHE+ +P++aI ya++L++ +++ + +
AP009153_2 85 TMGRIAAGISHEIGNPVAAIANYAHVLRM---------RTADVPGT- 121

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e ++ ++re+ r++r+ + lLd++r +
AP009153_2 122 ----------TEPIDALEREITRIDRIMRGLLDYARPRRL 151

AP009153_2543: domain 1 of 1, from 314 to 386: score 47.9, E = 3e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++e la +sH+LR+P++a+ +++ + l ++t++++e++
AP009153_2 314 ERDERLAIVSHDLRNPVNAVVMLTGAVLS-------RETPAGAEDVG 353

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ re +e i+ +a++ + Li+dl d sri ag
AP009153_2 354 IMG-------REEVEAIRGAARQVDGLIQDLQDVSRISAG 386

AP009153_2787: domain 1 of 1, from 148 to 208: score 47.4, E = 4.1e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+ +la++sH+L TPLt+Ir++a + + +++ +
AP009153_2 148 MKDALLATVSHDLHTPLTTIRALAGR--R---------SVADDAD-- 181

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++e++rl +L+++lLd+sri+ g
AP009153_2 182 -------------WLLVQQETDRLAHLVRELLDYSRIRGG 208

AP009153_3192: domain 1 of 1, from 321 to 387: score 44.6, E = 2.6e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + ++ +++H++++ L+ I+ ++e+++++l + + e
AP009153_3 321 AIGTLAGGIAHDFNNLLHPILSNTEAARAQL--------DNNGEA-- 357

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ yl+ i+r+aer + L++++L +sr ++
AP009153_3 358 ----------AMYLDDIRRSAERARTLVRRILSYSRTDNA 387

AP009153_0207: domain 1 of 1, from 431 to 497: score 44.6, E = 2.6e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++ +++H++++ LtaI g a+l+l+el + + +
AP009153_0 431 SLGRLAGGVAHDFNNLLTAIVGSADLALDEL--------PIDHPA-- 467

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r l ti+++a r +L ++lLd+sr
AP009153_0 468 ----------RAELATIKSSASRSGSLTRQLLDFSRRAPL 497

AP009153_1026: domain 1 of 1, from 363 to 429: score 43.1, E = 6.8e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++ +++H++++ Lta++g+++++ + ++ + +
AP009153_1 363 SIGRLAGGVAHDFNNILTAVIGFTDMAAA---------EAGESGRL- 399

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l+ ++r+a+r + L ++lL +sr +
AP009153_1 400 ----------QADLHQVRRAADRASVLTRQLLSFSRQQVL 429

AP009153_0519: domain 1 of 1, from 267 to 335: score 41.4, E = 2.1e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++a++ HE+++PL +r+++e L++ + +ee
AP009153_0 267 SLGRLAAGVGHEINNPLQYLRFNLEELRD------HPALRDDEEG-- 305

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +++ + + ++r+++ ++ l+++ r +a
AP009153_0 306 ----------RVAVDQAFEGVDRIRQVVDGLRTYVRPGAD 335

AP009153_2669: domain 1 of 1, from 353 to 419: score 39.9, E = 5.7e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++ +++H+L++ +a++ ya+l++ ++ + ++
AP009153_2 353 SLGTLAGGVAHDLNNVFAAVSSYAQLARQ---------QAHGQVTL- 389

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e l i+ +a+r +L++++L+++r ++
AP009153_2 390 ----------EEDLTAIETAAQRGTSLVRRVLQFARRQTR 419

AP009153_3229: domain 1 of 1, from 948 to 1014: score 37.4, E = 2.9e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++ +++H++++ Lt+I ++ael+ +l ++
AP009153_3 948 SMGTLAGGVAHDFNNLLTVIHANAELAASDL--------VPTSAA-- 984

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+++ +l +++r ++ ++++L++sr a
AP009153_3 985 ----------GEAISQLLVASHRAREVVRQILTFSRRTAL 1014

AP009153_0767: domain 1 of 1, from 597 to 663: score 37.1, E = 3.4e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +++ +++H++++ Lt+I g+++ L++ + +e +
AP009153_0 597 AIAQLAGGIAHDFNNLLTVITGATSFLRD---------SLDTESPL- 633

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e + i+r++er ++L ++lL r +
AP009153_0 634 ----------LEDIAAIERASERAEELTRQLLAVGRRQML 663

AP009153_1444: domain 1 of 1, from 324 to 403: score 35.0, E = 1.4e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkv.lagdtelseeqr
a + ++ +++H++++ LtaI g+++l + ++ + + e +r
AP009153_1 324 AVGTLAGGIAHDFNNLLTAIVGFTQLSEQQVS-AlQNAFAGSAESDR 369

lpeLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l+eL r+ l il++a+r + L +lL++sr ++
AP009153_1 370 LTEL-------RQDLTEILKAADRASLLTAQLLTFSRRQTV 403

AP009153_0652: domain 1 of 1, from 176 to 240: score 34.1, E = 2.5e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +e ++ +HEL++PLt Ir++++ L++++ +e++
AP009153_0 176 AFRESARRFAHELKNPLTPIRFAVDRLRRQA-----------PEEL- 210

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ ++++ +ea rl+ + + + ++ r+ g
AP009153_0 211 ----------RDTVDVLAEEAARLETMARSFAQFGRLPDG 240

AP009153_3262: domain 1 of 1, from 363 to 429: score 33.2, E = 4.5e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt++r yae+ + el +e
AP009153_3 363 AVGRLAGGIAHDFNNMLTVVRNYAEMVRS----------ELEPES-- 397

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
p+ + + il+++ + +Li++lL +sr +
AP009153_3 398 PM--------SKDMDEILHATSHAAQLIRQLLAFSRQQIL 429

AP009153_2617: domain 1 of 1, from 228 to 304: score 33.0, E = 5e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkv.lagdtelseeqr
+++efla+++HELRTP++ +r+ +el+ ++ v+ + ++ + e +
AP009153_2 228 QQREFLADAAHELRTPIARMRARVELAMLGVS-VqGPDGADVTGEVA 273

lpeLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + l ++ e++ ++++++lL+l+r++a
AP009153_2 274 R----------GDVLIALDGELRAVSHQVDELLQLARADAM 304

AP009153_1742: domain 1 of 1, from 526 to 592: score 32.6, E = 6.4e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ f+ +++H++++ L+aI ++aelL++el +l + +
AP009153_1 526 ALGAFAGGIAHDFNNYLSAIATNAELLRDEL--------PLLSSH-- 562

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r + il +a+r ++L +++L +sr +
AP009153_1 563 ----------RLEASEILGAAQRASALTRQILVFSRRQVV 592

AP009153_0577: domain 1 of 1, from 65 to 124: score 32.2, E = 8.6e-09
*->sHELRTPLtaIrgyaelLleeldkvlagdtelseeqrlpeLRledpe
+H+LR P+ a +++ae L+++++ ++ +++q
AP009153_0 65 AHDLRSPIGATLLLAERLRAGQF------GPVTAQQ----------- 94

yreyletilreaerllrLindlLdlsrieag<-*
++ l i++++ +++L dlLdl+r ++
AP009153_0 95 -ERQLGLIYESIFGMSALTGDLLDLARHGTS 124

AP009153_0839: domain 1 of 1, from 854 to 928: score 31.4, E = 1.4e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkv.lagdtelseeqr
+e++a+lsHEL +PL+aI +ae++++ g++ + + r
AP009153_0 854 VAGELTASLSHELGQPLAAIVNNAEVARR----MiERGRDGRHVDRR 896

lpeLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+L + l+ + +++r ++++++++ + r e g
AP009153_0 897 --AL-------DDVLRDVVAQGHRASEIVREFRRFLRREKG 928

AP009153_3088: domain 1 of 1, from 325 to 390: score 30.7, E = 2.2e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++++ +++H++++ Lt+I+ ae t ++
AP009153_3 325 ALGRLAGGIAHDFNNLLTVILHSAESVDG---------TITDDAA-- 360

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+ + +a r ++L+ ++L++sr++
AP009153_3 361 ----------REANADVMAAATRARDLVHRILTFSRMRDA 390

AP009153_1340: domain 1 of 1, from 490 to 556: score 29.5, E = 4.9e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++ +++H++++ Lt+I+++ + + +l+++++l
AP009153_1 490 SVGRLAGGIAHDFNNLLTVILAHNQFVTA----------ALPDDDTL 526

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + i +++ r L ++lL +sr +
AP009153_1 527 ----------KHDVAQIASAGTRAAGLTRQLLAFSRRQVL 556

AP009153_0610: domain 1 of 1, from 916 to 975: score 27.3, E = 2.1e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++ l ++ EL++PL+++++ ael + +t l e++
AP009153_0 916 AVGQSLGRVANELNNPLASLLAVAELHVT--------STQLVEDD-- 952

peLRledpeyreyletilreaerllrLindlLd<-*
r++ + + +ea+r +r++n+lLd
AP009153_0 953 ----------RRAMQQMVEEARRASRIVNQLLD 975

AP009153_3592: domain 1 of 1, from 250 to 316: score 27.0, E = 2.5e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + f+ ++sH++++ Lt+++gy++lLl +l + s e
AP009153_3 250 AIGTFAGGISHDFNNLLTGMLGYCDLLLSQL--------NPSTEA-- 286

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ i+ a r +L +++L sr
AP009153_3 287 ----------FADVNEIRALAVRGTELSRQILAVSRKAVL 316


Histogram of all scores:
score obs exp (one = represents 13 sequences)
----- --- ---
-14 4 0|=
-13 36 2|*==
-12 125 89|======*===
-11 307 466|======================== *
-10 619 865|================================================ *
-9 759 893|==========================================================*
-8 703 669|===================================================*===
-7 537 421|================================*=========
-6 337 242|==================*=======
-5 185 133|==========*====
-4 123 71|=====*====
-3 60 37|==*==
-2 42 19|=*==
-1 24 10|*=
0 11 5|*
1 6 2|*
2 3 1|*
3 2 0|=
> 4 52 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 348.7458
P(chi-square) = 0

Total sequences searched: 3935

Whole sequence top hits:
tophits_s report:
Total hits: 39
Satisfying E cutoff: 39
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 39
Satisfying E cutoff: 39
Total memory: 36K


Acknowledgements:

This research is funded by:

Developed by: