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Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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39 projects found  

1 accessions found for Gloeobacter violaceus PCC 7421  

Data for BA000045  

Available Atlases
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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: BA000045.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
BA000045_2749 CDS_2921186-2925076 141.4 1.1e-39 2
BA000045_4161 CDS_4360564-4359536 96.0 7.9e-27 1
BA000045_1854 CDS_1976366-1972641 92.0 1.1e-25 1
BA000045_0718 CDS_760721-763291 91.1 1.9e-25 1
BA000045_0033 CDS_31169-33247 90.2 3.6e-25 1
BA000045_0055 CDS_57918-55984 90.1 3.8e-25 1
BA000045_0635 CDS_681164-677001 88.2 1.3e-24 1
BA000045_0376 CDS_392640-394373 88.2 1.3e-24 1
BA000045_4411 CDS_4640201-4638075 87.6 1.9e-24 1
BA000045_4212 CDS_4409534-4411594 86.3 4.4e-24 1
BA000045_3736 CDS_3948927-3946195 85.9 5.6e-24 1
BA000045_2059 CDS_2210423-2212471 84.8 1.2e-23 1
BA000045_1493 CDS_1607384-1605576 84.6 1.4e-23 1
BA000045_1239 CDS_1318140-1320281 82.3 6.1e-23 1
BA000045_0861 CDS_907227-908669 81.3 1.2e-22 1
BA000045_1816 CDS_1937458-1936112 80.2 2.3e-22 1
BA000045_0634 CDS_676997-674979 79.6 3.6e-22 1
BA000045_1016 CDS_1088255-1091647 77.2 1.7e-21 1
BA000045_0418 CDS_439564-440721 75.2 6.4e-21 1
BA000045_2627 CDS_2785284-2783410 75.0 7.2e-21 1
BA000045_0099 CDS_100268-97911 73.5 1.9e-20 1
BA000045_1686 CDS_1799198-1797837 70.9 1e-19 1
BA000045_0023 CDS_22677-21151 65.0 4.7e-18 1
BA000045_1533 CDS_1654683-1653181 62.8 2.1e-17 1
BA000045_3138 CDS_3340069-3341817 61.1 6.2e-17 1
BA000045_2258 CDS_2419843-2421054 60.1 1.2e-16 1
BA000045_0282 CDS_294756-296066 54.6 4.4e-15 1
BA000045_0814 CDS_870978-868822 53.6 8.1e-15 1
BA000045_3675 CDS_3880658-3882214 51.1 4.1e-14 1
BA000045_3562 CDS_3754571-3758248 50.7 5.3e-14 1
BA000045_3432 CDS_3633338-3635038 47.9 3.3e-13 1
BA000045_3434 CDS_3635481-3637403 46.3 9.4e-13 2
BA000045_0572 CDS_610656-609544 41.9 1.7e-11 1
BA000045_3122 CDS_3325146-3324070 41.1 2.8e-11 1
BA000045_0380 CDS_398040-396973 39.0 1.1e-10 1
BA000045_1586 CDS_1703404-1704639 27.7 1.8e-07 1
BA000045_1587 CDS_1704641-1705279 27.1 2.7e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
BA000045_4161 1/1 102 170 .. 1 87 [] 96.0 7.9e-27
BA000045_1854 1/1 1005 1071 .. 1 87 [] 92.0 1.1e-25
BA000045_0718 1/1 483 549 .. 1 87 [] 91.1 1.9e-25
BA000045_0033 1/1 314 379 .. 1 87 [] 90.2 3.6e-25
BA000045_0055 1/1 404 472 .. 1 87 [] 90.1 3.8e-25
BA000045_0635 1/1 703 771 .. 1 87 [] 88.2 1.3e-24
BA000045_0376 1/1 349 415 .. 1 87 [] 88.2 1.3e-24
BA000045_4411 1/1 326 392 .. 1 87 [] 87.6 1.9e-24
BA000045_4212 1/1 309 377 .. 1 87 [] 86.3 4.4e-24
BA000045_3736 1/1 673 739 .. 1 87 [] 85.9 5.6e-24
BA000045_2059 1/1 362 428 .. 1 87 [] 84.8 1.2e-23
BA000045_1493 1/1 377 443 .. 1 87 [] 84.6 1.4e-23
BA000045_1239 1/1 484 550 .. 1 87 [] 82.3 6.1e-23
BA000045_0861 1/1 252 318 .. 1 87 [] 81.3 1.2e-22
BA000045_1816 1/1 209 275 .. 1 87 [] 80.2 2.3e-22
BA000045_0634 1/1 295 361 .. 1 87 [] 79.6 3.6e-22
BA000045_2749 2/2 1064 1130 .. 1 87 [] 78.0 1e-21
BA000045_1016 1/1 630 698 .. 1 87 [] 77.2 1.7e-21
BA000045_0418 1/1 155 219 .. 1 87 [] 75.2 6.4e-21
BA000045_2627 1/1 243 309 .. 1 87 [] 75.0 7.2e-21
BA000045_0099 1/1 407 473 .. 1 87 [] 73.5 1.9e-20
BA000045_1686 1/1 209 276 .. 1 87 [] 70.9 1e-19
BA000045_0023 1/1 271 334 .. 1 87 [] 65.0 4.7e-18
BA000045_2749 1/2 372 438 .. 1 87 [] 63.4 1.4e-17
BA000045_1533 1/1 272 340 .. 1 87 [] 62.8 2.1e-17
BA000045_3138 1/1 350 417 .. 1 87 [] 61.1 6.2e-17
BA000045_2258 1/1 163 235 .. 1 87 [] 60.1 1.2e-16
BA000045_0282 1/1 195 262 .. 1 87 [] 54.6 4.4e-15
BA000045_0814 1/1 494 562 .. 1 87 [] 53.6 8.1e-15
BA000045_3675 1/1 296 359 .. 1 87 [] 51.1 4.1e-14
BA000045_3562 1/1 998 1066 .. 1 87 [] 50.7 5.3e-14
BA000045_3432 1/1 343 411 .. 1 87 [] 47.9 3.3e-13
BA000045_3434 2/2 271 338 .. 1 87 [] 45.9 1.3e-12
BA000045_0572 1/1 134 202 .. 1 87 [] 41.9 1.7e-11
BA000045_3122 1/1 137 205 .. 1 87 [] 41.1 2.8e-11
BA000045_0380 1/1 128 196 .. 1 87 [] 39.0 1.1e-10
BA000045_1586 1/1 192 238 .. 1 67 [. 27.7 1.8e-07
BA000045_1587 1/1 6 54 .. 9 77 .. 27.1 2.7e-07

Alignments of top-scoring domains:
BA000045_4161: domain 1 of 1, from 102 to 170: score 96.0, E = 7.9e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++f++++sHELRTPLt+I+g++++Ll+ + + lse q+
BA000045_4 102 AQTDFVSTVSHELRTPLTSIKGFVDTLLRSG-------SQLSEAQH- 140

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l++i+++a+rl rL++d+L+ sri++g
BA000045_4 141 ----------RRFLRIIKNQADRLTRLVEDILTVSRIQSG 170

BA000045_1854: domain 1 of 1, from 1005 to 1071: score 92.0, E = 1.1e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+efla+lsHELRTPL+ I+g+++lL++ +++++ q+
BA000045_1 1005 SKDEFLATLSHELRTPLNPIIGFSQLLRR---------GKCDPAQT- 1041

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++le+i+r+++ +Li+d+Ld+sri +g
BA000045_1 1042 ----------AQALEVIERCGKLQAQLIDDMLDISRIISG 1071

BA000045_0718: domain 1 of 1, from 483 to 549: score 91.1, E = 1.9e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+efla++sHE+RTP+++++g+a++Ll+ d+ l+ q
BA000045_0 483 TKNEFLATMSHEIRTPMNGVIGLADVLLA--------DGGLTHRQ-- 519

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ +eti+ ++e ll +ind+Ld+s++e+g
BA000045_0 520 ----------RDSIETIRASGETLLTIINDILDFSKAESG 549

BA000045_0033: domain 1 of 1, from 314 to 379: score 90.2, E = 3.6e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHELRTP+++I+ +++lLle ++l++eq
BA000045_0 314 AKSDFLAAASHELRTPMHGIISMTDLLLE---------SDLGAEQ-- 349

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+ +i ++e +l+Lin++Ld+s+ieag
BA000045_0 350 ----------RELAAIIGYCGETMLSLINNILDISKIEAG 379

BA000045_0055: domain 1 of 1, from 404 to 472: score 90.1, E = 3.8e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+f++n+sHELRTPL++I+ y+e+ e++ + l++ ++
BA000045_0 404 AKSQFISNVSHELRTPLSSIKSYIETVYEFG-------DSLDDSTK- 442

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+l+t+ +e++rl rL+nd+Ldlsr+e+g
BA000045_0 443 ----------NEFLKTANQETDRLTRLVNDVLDLSRLESG 472

BA000045_0635: domain 1 of 1, from 703 to 771: score 88.2, E = 1.3e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHELRTPL++++ +a lL ++++ ++lse+q
BA000045_0 703 YKSEFLANMSHELRTPLNSLLILARLLSDNAE------GNLSEKQ-- 741

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
ey +ti++++ ll Lind+Ldl++ie+g
BA000045_0 742 ----------VEYGRTIHSAGADLLGLINDILDLAKIESG 771

BA000045_0376: domain 1 of 1, from 349 to 415: score 88.2, E = 1.3e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+efla+lsHELRTPL+ I+g +++L++ ++l++e +
BA000045_0 349 AKDEFLAMLSHELRTPLNPIIGWTQMLRR---------GNLTPEMQ- 385

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++leti+r ++ ++Li+dlLd+sri g
BA000045_0 386 ----------AKALETIERNGKLQNQLIEDLLDISRIIRG 415

BA000045_4411: domain 1 of 1, from 326 to 392: score 87.6, E = 1.9e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+efla+lsHELRTPL++I+g+a lL++ + l+ e++
BA000045_4 326 LKDEFLATLSHELRTPLNGILGFAGLLRR---------GRLDTETA- 362

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+++e+i+r a+ +Li+dlLd+s i ag
BA000045_4 363 ----------RRAVEIIERNAQAQAQLIEDLLDMSSIAAG 392

BA000045_4212: domain 1 of 1, from 309 to 377: score 86.3, E = 4.4e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k ef++ +sHELRTPLt+Irg++ lL +l ++lse+
BA000045_4 309 LKAEFVSVVSHELRTPLTSIRGALGLLTGGL------LGPLSEKG-- 347

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l++++ ++rl rLind+Ld +r+e+g
BA000045_4 348 ----------RRMLDIAIANTDRLVRLINDILDVERMESG 377

BA000045_3736: domain 1 of 1, from 673 to 739: score 85.9, E = 5.6e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+efla++sHELRTPL+aI+g +++L++ +l++e +
BA000045_3 673 IKDEFLATVSHELRTPLNAILGWTQILRR---------RKLDAESQ- 709

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++leti+r ++ ++Li+d+Ld sri +g
BA000045_3 710 ----------ARALETIERNGRAQNQLIEDILDVSRIITG 739

BA000045_2059: domain 1 of 1, from 362 to 428: score 84.8, E = 1.2e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+efla+lsHELRTPL+ I+g+++lL++ + l+e +
BA000045_2 362 IKDEFLATLSHELRTPLNPIIGFTQLLRK---------GQLDEASA- 398

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++leti+r a+ +r+i+d+Ldlsri +g
BA000045_2 399 ----------ARALETIERNARAQSRIIEDMLDLSRIITG 428

BA000045_1493: domain 1 of 1, from 377 to 443: score 84.6, E = 1.4e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+efla++sHELRTPL++I+g+++lL++ ++ ++e +
BA000045_1 377 AKDEFLATVSHELRTPLNSILGFTQLLRR---------HAGDPERL- 413

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l+ i+r a+ rL +dlLd sri +g
BA000045_1 414 ----------AVALDAIERNAKAQARLTEDLLDVSRIITG 443

BA000045_1239: domain 1 of 1, from 484 to 550: score 82.3, E = 6.1e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+efla lsHELRTPL+ I+g+a+lL++ + ls+ +
BA000045_1 484 AKDEFLAVLSHELRTPLNPIIGFAQLLRR--------KSGLSAAD-- 520

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++leti+r ++ +Li+d+Ld sri +g
BA000045_1 521 ----------YRALETIERNGRLQAQLIDDVLDVSRIISG 550

BA000045_0861: domain 1 of 1, from 252 to 318: score 81.3, E = 1.2e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++e+lan+sH+LRTPLta+r+ +e+ l+ + + eq+
BA000045_0 252 SRRELLANISHDLRTPLTAMRLSLEAVLD---------GVVNGEQV- 288

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yle+++rea +l +L+++l+ l+r ++g
BA000045_0 289 ----------GGYLEKMRREAIYLGQLVDQLMLLARSDSG 318

BA000045_1816: domain 1 of 1, from 209 to 275: score 80.2, E = 2.3e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+efla lsHELRTPL+ I+g +++L++ + ++++
BA000045_1 209 AKDEFLALLSHELRTPLNPIIGWTQMLKR---------GSVAADKQ- 245

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e le+i+r a+ ++Li+dlLd +rie+g
BA000045_1 246 ----------VEVLEIIERNAKLQNQLIQDLLDVARIEQG 275

BA000045_0634: domain 1 of 1, from 295 to 361: score 79.6, E = 3.6e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+efla++sHELRTPL++I+g a+lL++ +e+ +
BA000045_0 295 MKDEFLAMVSHELRTPLNSILGWAQLLRA---------RRIDEKAA- 331

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+le+i+r a+ +rLi+dlLd+sr +g
BA000045_0 332 ----------TGALESIERNARMQNRLIEDLLDISRVVTG 361

BA000045_2749: domain 2 of 2, from 1064 to 1130: score 78.0, E = 1e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+efla l HELRTPL+ I+g +++L++ ++ +++++
BA000045_2 1064 TKDEFLAILGHELRTPLNPIIGWTQMLRR---------GKVGPDKH- 1100

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++le+i+r a+ +Li+dlLd sri g
BA000045_2 1101 ----------DQALEIIERNARLQTQLIDDLLDVSRIMRG 1130

BA000045_1016: domain 1 of 1, from 630 to 698: score 77.2, E = 1.7e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+ fla++sHELRTPL+aI+g+++lLl++ +l e+ +
BA000045_1 630 QKNNFLASMSHELRTPLNAIIGFSQLLLRN--------KNLQEQPQ- 667

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l+++++ ++ lrL+nd+Ldl++i ag
BA000045_1 668 ---------VLLQLDRVYQNGKIQLRLVNDILDLAKIKAG 698

BA000045_0418: domain 1 of 1, from 155 to 219: score 75.2, E = 6.4e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++ +++HEL+TPLt+Ir+ ae+ l +++q
BA000045_0 155 QRDRWVGDAAHELKTPLTSIRLVAEMVLP----------RVGPDQ-- 189

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ le++l e++rl+ L++dlL++sr +ag
BA000045_0 190 ----------QRWLERLLGEVQRLNLLVQDLLEFSRWQAG 219

BA000045_2627: domain 1 of 1, from 243 to 309: score 75.0, E = 7.2e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+efla+lsHELRTPL++I+g+++lL++ + +++ +
BA000045_2 243 AKDEFLATLSHELRTPLNSIIGFSQLLRR---------GRMNPAAI- 279

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ e i+r ++ +L++dlLd s + g
BA000045_2 280 ----------EQAAEAIERNGRLQAQLVDDLLDASYMLRG 309

BA000045_0099: domain 1 of 1, from 407 to 473: score 73.5, E = 1.9e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+efla+lsHELR PLtaI+g ++lL+ +l++ +
BA000045_0 407 LKDEFLATLSHELRSPLTAILGWTKLLRQ---------VDLGAVRA- 443

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +le+i+r a ++Li+dlLd+sri ag
BA000045_0 444 ----------AHALEVIERNALAQNQLIEDLLDISRIVAG 473

BA000045_1686: domain 1 of 1, from 209 to 276: score 70.9, E = 1e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+a++sHELRTPL+a++++++++l+ +++++ +
BA000045_1 209 RLKQFTADASHELRTPLAALQTNVQVALA---------DPQPSVD-- 244

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
eyr+ le+ +r ++rl rL+ dlL l+r e
BA000045_1 245 --------EYRRSLEVTERLTRRLGRLVADLLFLARNEGL 276

BA000045_0023: domain 1 of 1, from 271 to 334: score 65.0, E = 4.7e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f++++ HELRTP+t +rg++elL + ++ +r
BA000045_0 271 SQRNFISDAGHELRTPITIVRGHLELLGD------------DPGER- 304

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e ++++e++r++r ++dlL l+r+e +
BA000045_0 305 ----------AETMAIVYDELDRMNRFVDDLLLLARAERP 334

BA000045_2749: domain 1 of 2, from 372 to 438: score 63.4, E = 1.4e-17
*->akseflanlsHELRTPLtaIrgyae.lLleeldkvlagdtelseeqr
ak+ f++n+sHE+RTPL+ ++g +e++L + s+++
BA000045_2 372 AKTVFFSNVSHEFRTPLSLLLGPLEdVLAG---------DGISAPT- 408

lpeLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re l ++r ++rll+L+n lLd+srieag
BA000045_2 409 -----------REQLTLAQRNGRRLLKLVNTLLDFSRIEAG 438

BA000045_1533: domain 1 of 1, from 272 to 340: score 62.8, E = 2.1e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+ ++sH+LR PL ++g+a++Lle++ +++ ++++
BA000045_1 272 ELEAFTYSVSHDLREPLRNMQGLAQALLEDF-------SAQLPPTA- 310

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y + i r++++++ Li+dlL++sr++
BA000045_1 311 ----------HQYAQLIVRSSQQMDTLIQDLLTYSRLGRA 340

BA000045_3138: domain 1 of 1, from 350 to 417: score 61.1, E = 6.2e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +a++sH+L+TPL++I++ a+l+ + +s q
BA000045_3 350 LQTDIVAGVSHDLKTPLAGIIASAQLIAS---------GRASGVQ-- 385

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e +++ il ea+rl + ++ +L+++++e+
BA000045_3 386 --------ETKQFSGYILAEARRLTAVVEKVLTMAKLESR 417

BA000045_2258: domain 1 of 1, from 163 to 235: score 60.1, E = 1.2e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++ l+ l+HEL+TPL++I+gya l l+ g+t + ++l
BA000045_2 163 AHQDNLSVLAHELKTPLNSIIGYANLFLR------TGRTRTDIGDTL 203

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
p e +e++ r + rll+Lind L++sr eag
BA000045_2 204 PD--------FEHIERVVRNGTRLLHLINDALEFSRSEAG 235

BA000045_0282: domain 1 of 1, from 195 to 262: score 54.6, E = 4.4e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+a++sHELR+PL aI+ ++ ++ + +++ ++ q+
BA000045_0 195 RLEQFAADASHELRNPLMAIQSNCAVAIK-----YPEQMRPGDRQK- 235

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +i+++a++ll L+++lL l+r ++g
BA000045_0 236 -------------FLRIEDAARQLLTLVQELLMLARTGEG 262

BA000045_0814: domain 1 of 1, from 494 to 562: score 53.6, E = 8.1e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+a+l H+LRTPL a ++ l++++ ++ls+ q
BA000045_0 494 LREDFVATLTHDLRTPLLAAVQTLGFTLDGQY------GPLSDGQ-- 532

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l ++++ + ll L++ lL++ r eag
BA000045_0 533 ----------QQILLAVIESHRELLGLVESLLTIYRYEAG 562

BA000045_3675: domain 1 of 1, from 296 to 359: score 51.1, E = 4.1e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ f+ +sHELRTPLt Irg++el+ + ++ +r
BA000045_3 296 TQRHFVNEVSHELRTPLTIIRGHLELIGD------------DPHER- 329

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e +++++e+ r+ r ++ lL l r+e
BA000045_3 330 ----------AETMHIVHDELGRMHRFVESLLLLDRLERH 359

BA000045_3562: domain 1 of 1, from 998 to 1066: score 50.7, E = 5.3e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+++a+ sHE+RTPL++I++ ++lL ++ +++s+++r
BA000045_3 998 LKSRLIAMTSHEFRTPLSTIILSTQLLSSDS-------PHQSAQKR- 1036

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++i+r++e++ +L++ +L + ++e
BA000045_3 1037 ----------LKQQQRIERAIEQMTDLLDGILSIGQAEID 1066

BA000045_3432: domain 1 of 1, from 343 to 411: score 47.9, E = 3.3e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+ +sH+L PL I y++lL+ ++ ++l+++
BA000045_3 343 DLEQFAYVASHDLQEPLRMIGSYLQLLEQRYQ------DKLDPDA-- 381

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e++ + + a+ ++ LindlL +sr +
BA000045_3 382 ----------QEFIGYAVDGARWMQTLINDLLAYSRVGIR 411

BA000045_3434: domain 2 of 2, from 271 to 338: score 45.9, E = 1.3e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++ +++H+L++ Lt I ++a+lL +l t+l+ ++
BA000045_3 271 SLGTLAGGIAHDLNNILTPIVAAAQLLPLRL-------TDLDQQD-- 308

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l+ +++ ++r ++L+ ++L ++r +g
BA000045_3 309 ----------LRLLRMLEENSRRGSHLVTQILSFARGMEG 338

BA000045_0572: domain 1 of 1, from 134 to 202: score 41.9, E = 1.7e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+s+f+a+l H+L+TPL + + +++ ++++ +e s++q
BA000045_0 134 AQSDFVATLTHDLKTPLLGAQQTLQFFGRGQF------GEVSPQQ-- 172

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e ++++ + ll+L++ lL + r
BA000045_0 173 ----------LGVIEMLQKSNHKLLALVDTLLAIYRNSLS 202

BA000045_3122: domain 1 of 1, from 137 to 205: score 41.1, E = 2.8e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+a l+H+LRTPL a + lL + +++++
BA000045_3 137 QREDFVARLAHDLRTPLVAADRMFNLLGQ------GALGPMPPSM-- 175

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e ++++ r+ ll+L++ lLd r eag
BA000045_3 176 ----------AETVDIMARSNSNLLALVRTLLDVYRYEAG 205

BA000045_0380: domain 1 of 1, from 128 to 196: score 39.0, E = 1.1e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + f+a+l H+L+TPL ++ ++ +++ + l++ q
BA000045_0 128 AYENFTAALTHDLKTPLQGMAQTLRFFAQGQF------GRLTDAQ-- 166

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ ++ +r++ ll+L + lL++ r e +
BA000045_0 167 ----------RQVVQLFERSLGTLLELTDTLLTIYRNERE 196

BA000045_1586: domain 1 of 1, from 192 to 238: score 27.7, E = 1.8e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +fl l+HE RTPLt+Ir+++ l l+ + l+e
BA000045_1 192 SELDFLELLAHEVRTPLTTIRTLTRLVLR--------KGGLTESA-- 228

peLRledpeyreyletilre<-*
r le i+re
BA000045_1 229 ----------RTHLEAIDRE 238

BA000045_1587: domain 1 of 1, from 6 to 54: score 27.1, E = 2.7e-07
*->lsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrlpeLRledp
l+H+LR+P+ +Ir++a l ++l ++ ++ q
BA000045_1 6 LAHQLRNPVMVIRTLARLVGKRL-------GPDDPNQ---------- 35

eyreyletilreaerllrLind<-*
+le i re +rl++L++d
BA000045_1 36 ---VLLEQIARECRRLDALLED 54


Histogram of all scores:
score obs exp (one = represents 15 sequences)
----- --- ---
-15 2 0|=
-14 13 0|=
-13 53 3|*===
-12 181 101|======*======
-11 425 525|============================= *
-10 709 974|================================================ *
-9 832 1006|======================================================== *
-8 769 753|==================================================*=
-7 572 474|===============================*=======
-6 350 273|==================*=====
-5 228 149|=========*======
-4 110 80|=====*==
-3 61 42|==*==
-2 37 22|=*=
-1 19 11|*=
0 14 6|*
1 6 3|*
2 3 1|*
> 3 46 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 310.9798
P(chi-square) = 0

Total sequences searched: 4430

Whole sequence top hits:
tophits_s report:
Total hits: 37
Satisfying E cutoff: 37
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 38
Satisfying E cutoff: 38
Total memory: 36K


Acknowledgements:

This research is funded by:

Developed by: