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Classification of phyla is from NCBI page
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2 accessions found for Rhodopseudomonas palustris CGA009  

Data for BX571963  

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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: BX571963.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
BX571963_4415 CDS_4977876-4975255 96.1 8.3e-27 1
BX571963_1679 CDS_1873113-1870522 90.1 4.1e-25 1
BX571963_0318 CDS_346622-344712 89.4 6.5e-25 1
BX571963_1936 CDS_2181242-2178903 87.9 1.7e-24 1
BX571963_1556 CDS_1728789-1731500 86.9 3.3e-24 1
BX571963_1856 CDS_2086715-2088547 84.4 1.6e-23 1
BX571963_1970 CDS_2221778-2220180 83.9 2.4e-23 1
BX571963_4778 CDS_5397587-5396238 78.7 6.9e-22 1
BX571963_1249 CDS_1369928-1366560 75.8 4.6e-21 1
BX571963_3931 CDS_4441771-4444836 73.9 1.5e-20 1
BX571963_4138 CDS_4683029-4684075 72.6 3.8e-20 1
BX571963_0358 CDS_387781-386036 70.2 1.7e-19 1
BX571963_0079 CDS_91963-89417 70.2 1.8e-19 1
BX571963_2999 CDS_3399286-3396563 67.9 8e-19 1
BX571963_0854 CDS_948562-945053 61.6 5e-17 1
BX571963_0981 CDS_1081721-1084108 59.4 2e-16 1
BX571963_3932 CDS_4444803-4446011 58.6 3.5e-16 1
BX571963_2590 CDS_2947222-2948394 51.0 5e-14 1
BX571963_4750 CDS_5365239-5364022 50.1 8.7e-14 1
BX571963_2365 CDS_2683532-2682429 47.2 5.8e-13 1
BX571963_1930 CDS_2167673-2169121 46.7 8.4e-13 1
BX571963_2592 CDS_2950006-2952297 44.2 4.1e-12 1
BX571963_1313 CDS_1433238-1435136 42.7 1.1e-11 1
BX571963_1765 CDS_1980956-1978647 41.9 1.9e-11 1
BX571963_4365 CDS_4917727-4916339 41.7 2.1e-11 1
BX571963_0573 CDS_635547-634225 41.0 3.4e-11 1
BX571963_4245 CDS_4791190-4792716 39.8 7.4e-11 1
BX571963_3569 CDS_4036352-4037686 39.2 1.1e-10 1
BX571963_3214 CDS_3632669-3634729 38.5 1.7e-10 1
BX571963_1328 CDS_1447208-1451350 38.1 2.2e-10 1
BX571963_3013 CDS_3411808-3414084 37.4 3.4e-10 1
BX571963_0584 CDS_645698-648439 37.4 3.5e-10 1
BX571963_3880 CDS_4384519-4381871 32.9 6.8e-09 1
BX571963_4787 CDS_5407468-5409120 31.9 1.3e-08 1
BX571963_0495 CDS_546761-550042 29.7 5.2e-08 1
BX571963_2105 CDS_2372346-2367208 29.4 6.4e-08 1
BX571963_3014 CDS_3414088-3416415 29.3 6.8e-08 1
BX571963_0980 CDS_1080263-1081615 28.5 1.2e-07 1
BX571963_2432 CDS_2764537-2763005 27.1 2.9e-07 2

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
BX571963_4415 1/1 371 436 .. 1 87 [] 96.1 8.3e-27
BX571963_1679 1/1 331 396 .. 1 87 [] 90.1 4.1e-25
BX571963_0318 1/1 122 187 .. 1 87 [] 89.4 6.5e-25
BX571963_1936 1/1 546 615 .. 1 87 [] 87.9 1.7e-24
BX571963_1556 1/1 399 465 .. 1 87 [] 86.9 3.3e-24
BX571963_1856 1/1 355 424 .. 1 87 [] 84.4 1.6e-23
BX571963_1970 1/1 264 333 .. 1 87 [] 83.9 2.4e-23
BX571963_4778 1/1 216 283 .. 1 87 [] 78.7 6.9e-22
BX571963_1249 1/1 672 738 .. 1 87 [] 75.8 4.6e-21
BX571963_3931 1/1 358 424 .. 1 87 [] 73.9 1.5e-20
BX571963_4138 1/1 121 190 .. 1 87 [] 72.6 3.8e-20
BX571963_0358 1/1 347 412 .. 1 87 [] 70.2 1.7e-19
BX571963_0079 1/1 616 684 .. 1 87 [] 70.2 1.8e-19
BX571963_2999 1/1 674 742 .. 1 87 [] 67.9 8e-19
BX571963_0854 1/1 802 867 .. 1 87 [] 61.6 5e-17
BX571963_0981 1/1 423 489 .. 1 87 [] 59.4 2e-16
BX571963_3932 1/1 39 105 .. 1 87 [] 58.6 3.5e-16
BX571963_2590 1/1 139 194 .. 1 78 [. 51.0 5e-14
BX571963_4750 1/1 33 98 .. 1 87 [] 50.1 8.7e-14
BX571963_2365 1/1 134 198 .. 1 87 [] 47.2 5.8e-13
BX571963_1930 1/1 237 303 .. 1 87 [] 46.7 8.4e-13
BX571963_2592 1/1 507 578 .. 1 87 [] 44.2 4.1e-12
BX571963_1313 1/1 400 470 .. 1 87 [] 42.7 1.1e-11
BX571963_1765 1/1 385 451 .. 1 87 [] 41.9 1.9e-11
BX571963_4365 1/1 259 317 .. 1 87 [] 41.7 2.1e-11
BX571963_0573 1/1 210 274 .. 1 87 [] 41.0 3.4e-11
BX571963_4245 1/1 279 350 .. 1 87 [] 39.8 7.4e-11
BX571963_3569 1/1 232 290 .. 1 87 [] 39.2 1.1e-10
BX571963_3214 1/1 314 382 .. 1 87 [] 38.5 1.7e-10
BX571963_1328 1/1 1153 1223 .. 1 87 [] 38.1 2.2e-10
BX571963_3013 1/1 522 590 .. 1 87 [] 37.4 3.4e-10
BX571963_0584 1/1 537 603 .. 1 87 [] 37.4 3.5e-10
BX571963_3880 1/1 498 564 .. 1 87 [] 32.9 6.8e-09
BX571963_4787 1/1 321 390 .. 1 87 [] 31.9 1.3e-08
BX571963_0495 1/1 690 756 .. 1 87 [] 29.7 5.2e-08
BX571963_2105 1/1 1490 1555 .. 1 82 [. 29.4 6.4e-08
BX571963_3014 1/1 537 605 .. 1 87 [] 29.3 6.8e-08
BX571963_0980 1/1 206 301 .. 1 87 [] 28.5 1.2e-07

Alignments of top-scoring domains:
BX571963_4415: domain 1 of 1, from 371 to 436: score 96.1, E = 8.3e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla++sHE+RTP+++++g+a Lle t+l++eq
BX571963_4 371 AKSSFLAMMSHEIRTPMNGVLGLANSLLE---------TKLDPEQ-- 406

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++ ti+++++ llr++nd+Ldls++eag
BX571963_4 407 ----------QQAVTTIRDSGDDLLRILNDILDLSKLEAG 436

BX571963_1679: domain 1 of 1, from 331 to 396: score 90.1, E = 4.1e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks f+a++sHE+RTP++a++g+a Lle t l++eq
BX571963_1 331 AKSSFVAMMSHEIRTPMNAVIGLATNLLE---------TRLDAEQ-- 366

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+++ +i+++++ ll++++d+Ld+s++eag
BX571963_1 367 ----------RQAVTSIHDAGDNLLQILDDILDFSKLEAG 396

BX571963_0318: domain 1 of 1, from 122 to 187: score 89.4, E = 6.5e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks++la++sHE+RTPL++I+g++ lLl+ t+ls+eq
BX571963_0 122 AKSRLLAMASHEIRTPLNGIIGMSRLLLD---------TPLSAEQ-- 157

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ y + ++ ++e ll+L ++lLd++rieag
BX571963_0 158 ----------ATYAKAVKTSGEALLALTDELLDYARIEAG 187

BX571963_1936: domain 1 of 1, from 546 to 615: score 87.9, E = 1.7e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+flan+sHELRTPL+aI+g++e++ +++ ++l++e+
BX571963_1 546 TKSKFLANMSHELRTPLNAIIGFSEIMGSGMF------GTLGSEK-- 584

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+ey + i ++++ll+ ind+Ld+s+ieag
BX571963_1 585 ---------YQEYCHDIMTSGHYLLEVINDILDMSKIEAG 615

BX571963_1556: domain 1 of 1, from 399 to 465: score 86.9, E = 3.3e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak +flan+sHE+RTPL++I+gya+l le d++l +++
BX571963_1 399 AKADFLANMSHEIRTPLNGIIGYADLVLE--------DETLAPDT-- 435

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ + +i +++++l+ +i+d+Ld+s+iea
BX571963_1 436 ----------RRQVMRIFEASDSLRVIIDDILDFSKIEAC 465

BX571963_1856: domain 1 of 1, from 355 to 424: score 84.4, E = 1.6e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHELRTPL+aI+g+++++l l++e r
BX571963_1 355 AKSRFLATMSHELRTPLNAIIGFSDMILQ------DDVLMLGPERR- 394

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ey + i +++++ll+ +n +Ld+s++e+g
BX571963_1 395 ----------KEYAQLINDSGQHLLSVVNGILDMSKMESG 424

BX571963_1970: domain 1 of 1, from 264 to 333: score 83.9, E = 2.4e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla +sHELRTPL+aI+g++e+++ + ++
BX571963_1 264 AKSRFLAQMSHELRTPLNAILGFSEVMKS---------EIFGAHA-- 299

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+p y++y i++++ +ll+Lin++Ldlsrieag
BX571963_1 300 ------VPAYKDYSADIHNSGVHLLNLINEILDLSRIEAG 333

BX571963_4778: domain 1 of 1, from 216 to 283: score 78.7, E = 6.9e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+an+sHELRTPL+a++g++++L+ +++++++++
BX571963_4 216 MRADFVANASHELRTPLAALSGFIDTLQG---------QARDDPKAR 253

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l +++ +a r+ rLi+dlL lsr e
BX571963_4 254 ----------ERFLGIMHAQATRMARLIDDLLSLSRVELS 283

BX571963_1249: domain 1 of 1, from 672 to 738: score 75.8, E = 4.6e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+ + +lsHELR PL+aI+gya+lL+ d +l++
BX571963_1 672 AKSRYVVGLSHELRSPLNAISGYAQLLEQ--------DNTLPPRP-- 708

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ ++ ++r+a++l+ Li+ lLd+s+ieag
BX571963_1 709 ----------RDQIRLMRRSADHLSGLIDGLLDISKIEAG 738

BX571963_3931: domain 1 of 1, from 358 to 424: score 73.9, E = 1.5e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ f++n+sHE+RTPLt ++ +e +l ++ +eq
BX571963_3 358 AKTAFFSNVSHEFRTPLTLMLSPLEEALG--------RDGIADEQ-- 394

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +l +++r + rll+L+n lLd++rieag
BX571963_3 395 ----------RTLLGIAHRNGLRLLKLVNTLLDFARIEAG 424

BX571963_4138: domain 1 of 1, from 121 to 190: score 72.6, E = 3.8e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak + la lsHE+R PL+aI+g+ae++ e + ++l+ e
BX571963_4 121 AKADVLARLSHEIRAPLNAIIGFAEVMIE------ERFGPLGNER-- 159

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y +y + i+ ++er +++dlLdlsrie+g
BX571963_4 160 ---------YVDYMKDIRASGERVIGIVDDLLDLSRIETG 190

BX571963_0358: domain 1 of 1, from 347 to 412: score 70.2, E = 1.7e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++f+a++sHEL++PLt++r ++e+L ++++ r
BX571963_0 347 AIERFAADVSHELKNPLTSLRSAVETLPL----------AKTDNSR- 382

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l++i+++++rl+rLi+d+ d sr++a+
BX571963_0 383 ----------ARLLSVIEHDVKRLDRLISDISDASRLDAE 412

BX571963_0079: domain 1 of 1, from 616 to 684: score 70.2, E = 1.8e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k +f+ ++s ELR PLt+I+g+a+ L + + ++l+e+q
BX571963_0 616 IKIDFVHHVSYELRSPLTTIIGFAHFLSD------SSTGPLTEKQ-- 654

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ey++ i +++ l ++in++Ldl+ i+ag
BX571963_0 655 ----------AEYVNYITTSTNALMAIINNILDLASIDAG 684

BX571963_2999: domain 1 of 1, from 674 to 742: score 67.9, E = 8e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +l ++sH+L+TPL+a++g+a ++++ + ++ls+ qr
BX571963_2 674 LRQALLTSISHDLKTPLAAVLGAATTMRDLA-------SHLSDAQR- 712

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e++ ti +e+erl+r i +lLd++++e+g
BX571963_2 713 ----------TELIGTIVEESERLNRFIANLLDMTKLESG 742

BX571963_0854: domain 1 of 1, from 802 to 867: score 61.6, E = 5e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++fla++sH++ +PL+a r+ya L e + e+
BX571963_0 802 SKTRFLAAASHDILQPLNAARLYATSLVE---------RQNGGED-- 837

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++e i+++++ ++++i lLd+sr++ag
BX571963_0 838 ----------SRLVENIDESLQAIEEIIGALLDISRLDAG 867

BX571963_0981: domain 1 of 1, from 423 to 489: score 59.4, E = 2e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt Ir +++ L++ +l+ee r
BX571963_0 423 AVGQLTGGVAHDFNNLLTIIRSAVDFLRR---------RDLPEERR- 459

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+y++ i + a+r ++L +lL ++r +
BX571963_0 460 ----------RRYVDAISDTADRASKLTGQLLAFARRQPL 489

BX571963_3932: domain 1 of 1, from 39 to 105: score 58.6, E = 3.5e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+Ir a+lL++ el++e +
BX571963_3 39 AIGQLTGGVAHDFNNMLTVIRSSADLLRR---------RELPPERV- 75

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+y++ i + a+r +L +lL+++r a+
BX571963_3 76 ----------RRYVDAISDTADRAAKLTGQLLTFARRHAQ 105

BX571963_2590: domain 1 of 1, from 139 to 194: score 51.0, E = 5e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++a+l+HE+++PL++Irg+a+lL+ +s+e+
BX571963_2 139 SVIALAAMLAHEIKNPLSGIRGAAQLLEQ----------QASAED-- 173

peLRledpeyreyletilreaerllrLindl<-*
r +++ i +ea+r+ L++++
BX571963_2 174 ----------RMLTRLICDEADRIVTLVDRM 194

BX571963_4750: domain 1 of 1, from 33 to 98: score 50.1, E = 8.7e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + la+ +HE RTPLt+I++ +elL + ++l+e +
BX571963_4 33 MIETVLATFAHEVRTPLTGILAVSELLAT---------SDLNERE-- 68

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ ++ti+ ae+l+ L + d +r+++
BX571963_4 69 ----------RRWVDTIKAGAEHLSGLATLFVDAARLGTT 98

BX571963_2365: domain 1 of 1, from 134 to 198: score 47.2, E = 5.8e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ + a+++HELRTPLt +rg ++ L ++++ e+
BX571963_2 134 SMTSWNAAIAHELRTPLTILRGRLQGLTDGVF----------EPS-- 168

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+++++l ++e l+rL++dl+ + +++
BX571963_2 169 ----------DELFRSLLVQVENLSRLVDDLRVVTLSDSQ 198

BX571963_1930: domain 1 of 1, from 237 to 303: score 46.7, E = 8.4e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ e n++H+L+TPLt +r ae +l+ ++se +
BX571963_1 237 GMKEVSDNIAHDLKTPLTRLRNRAEEALA---------RAASESD-- 272

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yr +le+ ++e++ l r n lL ++r+eag
BX571963_1 273 ---------YRVALERTIEESDGLIRTFNALLMIARAEAG 303

BX571963_2592: domain 1 of 1, from 507 to 578: score 44.2, E = 4.1e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++ ++ ++HE+++PLt I++ ae +++++ g ++ +
BX571963_2 507 AWGDVARRIAHEIKNPLTPIQLSAERIKRKF-----GKVIVEDKNI- 547

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ ++ti r+++ ++r+++++ ++r+ +
BX571963_2 548 ---------FEQCTDTIVRQVDDIRRMVDEFSRFARMPKP 578

BX571963_1313: domain 1 of 1, from 400 to 470: score 42.7, E = 1.1e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++a+++HE ++PL+aI+ y + +++l +++ + ++
BX571963_1 400 VLGQLAASIAHEVNQPLAAIINYGKSGKRWLV-----RPTSDIGEV- 440

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e l++i + a+r + + +++ l+r a+
BX571963_1 441 ----------AECLDKIVSNANRAAEVVGRVRFLARKSAP 470

BX571963_1765: domain 1 of 1, from 385 to 451: score 41.9, E = 1.9e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+I+g+ae+Ll+el t++++
BX571963_1 385 AIGQLTGGVAHDFNNMLTVISGTAEILLDEL-------TDRPDLV-- 422

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + i+++aer +L ++lL ++r +
BX571963_1 423 -----------TIAKMIDQAAERGADLTRQLLAFARKQPL 451

BX571963_4365: domain 1 of 1, from 259 to 317: score 41.7, E = 2.1e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +la++sH+LRT Lt ++ +el+ + +++
BX571963_4 259 QRTAMLAGVSHDLRTILTRFKLELELIGD-------------APE-- 290

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e ++++++ ++++++ L ++r ++g
BX571963_4 291 -------------TEGMRKDVDEMSAMLEAYLAFARGDSG 317

BX571963_0573: domain 1 of 1, from 210 to 274: score 41.0, E = 3.4e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++a+++HEL TPL++I + + L++ ++++e
BX571963_0 210 QLDGLAAAAAHELGTPLSTIFLISRELEK----------TAPPEM-- 244

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l+t++++a+r+++++ + +ls ++a+
BX571963_0 245 ----------ASDLRTLREQAQRCREILGKIAQLSSAGAP 274

BX571963_4245: domain 1 of 1, from 279 to 350: score 39.8, E = 7.4e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e++++l+HEL++PL+aI+ y + ++ +lag+t+ + ++
BX571963_4 279 AMGEMASALAHELNQPLSAISNYMKGSRR----LLAGSTDPNTVKI- 320

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + e++ ++a r ++i++l+d+ ++
BX571963_4 321 ----------ESAMERAAEQALRAGQIIRRLRDFVARGES 350

BX571963_3569: domain 1 of 1, from 232 to 290: score 39.2, E = 1.1e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++la++sH+LRTP+t +r+ ae +++
BX571963_3 232 DRTRMLAAISHDLRTPITRMRLRAEFIED------------------ 260

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l++++++ +++ +L++ r +a
BX571963_3 261 ----------DHQRTQTLHDLDQMGAMLTAVLTFLRDGAT 290

BX571963_3214: domain 1 of 1, from 314 to 382: score 38.5, E = 1.7e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +l+H++++ L++I+g +el+ +
BX571963_3 314 AVGQLTGGLAHDFNNLLAGISGSLELMSS---------RIRQGRV-- 349

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+++y+ ++ +++r +L +lL ++r ++
BX571963_3 350 -------GEIEKYVVAAQGAVKRAASLTHRLLAFARRQTL 382

BX571963_1328: domain 1 of 1, from 1153 to 1223: score 38.1, E = 2.2e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ f+a++ HE+++P+++I++ +e++l++l+ e+++
BX571963_1 1153 ALGSFAASIVHEINQPIASILAQTEAALRWLN------REQPDIG-- 1191

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ + l +i+++++r +++ l+ l +
BX571963_1 1192 --------EVTQGLTRIRNSGRRTADIVKSLRSLGKQAPA 1223

BX571963_3013: domain 1 of 1, from 522 to 590: score 37.4, E = 3.4e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+ +sH+++ PL I ++a lL ++ e+++e +
BX571963_3 522 ELESFAHVASHDIKEPLRHIEAFAGLLADNI-------REMGDERL- 560

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ i+++++rl++Lindl ++s+++
BX571963_3 561 ----------GVMVSGIEKSSRRLRNLINDLAEFSQLGRR 590

BX571963_0584: domain 1 of 1, from 537 to 603: score 37.4, E = 3.5e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H+L++ Lt+I g +e+L + + + + +
BX571963_0 537 AIGQLTGGVAHDLNNILTVITGGIEILAD---------GVSDRPGL- 573

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ +++++ r ++L lL +sr +
BX571963_0 574 ----------KDVAAMVDQAVTRASDLTHGLLSFSRKQPL 603

BX571963_3880: domain 1 of 1, from 498 to 564: score 32.9, E = 6.8e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++ +++H++++ L+aI+++ + Ll+ ++ +++
BX571963_3 498 TIGQLAGGIAHDFNNVLSAIMMANDFLLN--------AHKPTDPS-- 534

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + i++ a r L+++lL +sr ++
BX571963_3 535 ----------FQDIMQIKQNATRAATLVRQLLAFSRKQTL 564

BX571963_4787: domain 1 of 1, from 321 to 390: score 31.9, E = 1.3e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+e l +++H+L++PL +I+g +e+L e ++ +e s +++
BX571963_4 321 FKNEILGTVAHDLKNPLGVILGRTEMLTE------LIGAESSKDHV- 360

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ i+++++rl +++ l + ++a
BX571963_4 361 ----------IAQVDHIRDATRRLTLMVDHLISDAMADAF 390

BX571963_0495: domain 1 of 1, from 690 to 756: score 29.7, E = 5.2e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++ +++H++++ Lt+I g+++++ + + ++ +++
BX571963_0 690 SIGQLTGGIAHDFNNMLTVITGTIDIISD---------GVADQPHL- 726

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + + i ++a+r +L + lL ++r +
BX571963_0 727 ----------AAIAKLISEAADRGAELTRLLLAFARKQPL 756

BX571963_2105: domain 1 of 1, from 1490 to 1555: score 29.4, E = 6.4e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +e++ +++HE+++PLtaI+++a+++l++l+ e+++
BX571963_2 1490 AIGELVISIAHEINQPLTAIITNADVCLRWLN------NEQPSIA-- 1528

peLRledpeyreyletilreaerllrLindlLdls<-*
e + + +++++ ++r + ++ ++ l+
BX571963_2 1529 --------EAKNAASRVIENGRRAANVVQTIRGLA 1555

BX571963_3014: domain 1 of 1, from 537 to 605: score 29.3, E = 6.8e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+ ++H+L+ PL I ++a lL + +l
BX571963_3 537 ELESFAYVAAHDLKEPLRHIEAFAGLLND---------------LLL 568

peLR..ledpeyreyletilreaerllrLindlLdlsrieag<-*
pe+R++l +++ i+ +++rl++Lindl ++sri+ +
BX571963_3 569 PEARsrL-----SLMVNGIEASSRRLRALINDLAEYSRIGRQ 605

BX571963_0980: domain 1 of 1, from 206 to 301: score 28.5, E = 1.2e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldk....v.lagdtels
++++++a+++HEL++P++ I g++++L ++ d+ + +++ ++++ +
BX571963_0 206 SLGRLVAGVAHELNNPISFIYGNIHTLDRYRDRmsayLgAIHRGAEP 252

eeqrlpeLR..l....edpeyreyletilreaerllrLindlLdlsriea
+e +LR++l+ + y ++e l+ a r + + +l+ ls +
BX571963_0 253 AEI--ERLRrdLkidaLLADYGSLIEGTLEGAMRVADVVKNLRRLSFPKS 300

g<-*
g
BX571963_0 301 G 301


Histogram of all scores:
score obs exp (one = represents 17 sequences)
----- --- ---
-15 1 0|=
-14 5 0|=
-13 58 3|*===
-12 183 110|======*====
-11 413 570|========================= *
-10 800 1058|================================================ *
-9 988 1093|==========================================================*
-8 836 818|================================================*=
-7 615 515|==============================*======
-6 374 296|=================*====
-5 236 162|=========*====
-4 123 87|=====*==
-3 58 46|==*=
-2 34 24|=*
-1 24 12|*=
0 11 6|*
1 2 3|*
2 2 1|*
3 2 0|=
4 0 0|
5 1 0|=
6 0 0|
7 1 0|=
8 0 0|
9 0 0|
10 1 0|=
11 0 0|
12 1 0|=
13 3 0|=
14 0 0|
15 0 0|
> 16 43 -|===


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 272.6487
P(chi-square) = 0

Total sequences searched: 4833

Whole sequence top hits:
tophits_s report:
Total hits: 39
Satisfying E cutoff: 39
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 38
Satisfying E cutoff: 38
Total memory: 36K


Acknowledgements:

This research is funded by:

Developed by: