Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
Search:
264 projects found  

1 accessions found for Pseudomonas syringae pv. syringae B728a  

Data for CP000075  

Available Atlases
Other Plots
hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP000075.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP000075_1099 CDS_1246415-1244685 105.8 1.5e-29 2
CP000075_3697 CDS_4385550-4388303 101.9 2e-28 1
CP000075_4407 CDS_5270882-5273671 91.0 2.3e-25 1
CP000075_2020 CDS_2347746-2345809 90.1 4.2e-25 1
CP000075_1938 CDS_2213422-2211083 86.4 5e-24 1
CP000075_2112 CDS_2473020-2469400 84.4 1.8e-23 2
CP000075_3611 CDS_4295384-4297774 84.4 1.8e-23 1
CP000075_2939 CDS_3531746-3527685 83.4 3.5e-23 1
CP000075_5032 CDS_5971772-5973094 83.3 3.5e-23 1
CP000075_3772 CDS_4493011-4491827 74.8 9.6e-21 1
CP000075_2444 CDS_2830334-2833852 73.2 2.6e-20 1
CP000075_3503 CDS_4179987-4177750 72.2 5.1e-20 1
CP000075_2049 CDS_2394587-2397250 71.1 1e-19 1
CP000075_0264 CDS_280205-281992 67.2 1.4e-18 2
CP000075_3374 CDS_4033610-4034998 66.2 2.6e-18 1
CP000075_1125 CDS_1276349-1274985 66.2 2.6e-18 1
CP000075_4338 CDS_5193624-5191591 65.8 3.3e-18 1
CP000075_0723 CDS_828945-827353 65.5 4.1e-18 1
CP000075_4820 CDS_5717771-5718856 65.2 4.8e-18 1
CP000075_2384 CDS_2765961-2762950 65.1 5.1e-18 1
CP000075_3963 CDS_4712804-4711422 65.1 5.3e-18 1
CP000075_1497 CDS_1686402-1687781 64.7 7e-18 1
CP000075_3714 CDS_4402985-4401375 64.5 7.8e-18 1
CP000075_3791 CDS_4509547-4508297 63.8 1.2e-17 1
CP000075_3773 CDS_4494312-4493125 63.4 1.6e-17 1
CP000075_1917 CDS_2191553-2192686 62.2 3.4e-17 1
CP000075_4438 CDS_5305442-5306572 60.6 1e-16 1
CP000075_3459 CDS_4125079-4123865 59.9 1.6e-16 1
CP000075_4798 CDS_5689763-5688372 59.5 2e-16 1
CP000075_2866 CDS_3441397-3442788 59.2 2.5e-16 1
CP000075_4068 CDS_4853853-4852564 59.1 2.6e-16 1
CP000075_1291 CDS_1457808-1461437 57.9 5.6e-16 1
CP000075_3590 CDS_4272113-4273462 56.6 1.3e-15 1
CP000075_1584 CDS_1783463-1779987 52.8 1.6e-14 1
CP000075_3511 CDS_4186583-4187956 52.8 1.6e-14 1
CP000075_3995 CDS_4757326-4759716 50.9 5.5e-14 1
CP000075_0831 CDS_945730-942776 49.6 1.3e-13 1
CP000075_0259 CDS_275025-276347 48.3 3e-13 1
CP000075_3354 CDS_4014458-4012518 47.5 5e-13 1
CP000075_3084 CDS_3690962-3692137 47.4 5.6e-13 1
CP000075_2447 CDS_2835328-2836509 46.6 8.9e-13 1
CP000075_5088 CDS_6039145-6038078 44.6 3.4e-12 1
CP000075_2977 CDS_3571899-3570625 44.1 4.6e-12 2
CP000075_4936 CDS_5852145-5853959 43.7 5.9e-12 1
CP000075_2373 CDS_2754252-2752948 42.1 1.7e-11 1
CP000075_1777 CDS_2028359-2025489 38.3 2.1e-10 1
CP000075_3531 CDS_4209228-4211303 38.0 2.5e-10 1
CP000075_2449 CDS_2839074-2837044 38.0 2.5e-10 1
CP000075_4088 CDS_4874589-4876625 36.7 5.9e-10 1
CP000075_3911 CDS_4654401-4656308 35.3 1.5e-09 1
CP000075_3993 CDS_4754002-4755759 32.5 9.1e-09 1
CP000075_4230 CDS_5040138-5038879 32.2 1.1e-08 1
CP000075_1111 CDS_1259672-1261123 31.8 1.4e-08 1
CP000075_1299 CDS_1471078-1468991 31.7 1.5e-08 1
CP000075_4372 CDS_5230521-5227798 31.3 2e-08 1
CP000075_2699 CDS_3281359-3279755 31.0 2.4e-08 1
CP000075_2030 CDS_2356319-2355285 30.7 3e-08 1
CP000075_3059 CDS_3659376-3660704 27.6 2.3e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP000075_3697 1/1 284 349 .. 1 87 [] 101.9 2e-28
CP000075_1099 2/2 315 383 .. 1 87 [] 97.9 2.6e-27
CP000075_4407 1/1 396 461 .. 1 87 [] 91.0 2.3e-25
CP000075_2020 1/1 266 331 .. 1 87 [] 90.1 4.2e-25
CP000075_1938 1/1 404 468 .. 1 87 [] 86.4 5e-24
CP000075_3611 1/1 304 369 .. 1 87 [] 84.4 1.8e-23
CP000075_2112 2/2 714 780 .. 1 87 [] 83.7 2.8e-23
CP000075_2939 1/1 641 706 .. 1 87 [] 83.4 3.5e-23
CP000075_5032 1/1 205 272 .. 1 87 [] 83.3 3.5e-23
CP000075_3772 1/1 173 238 .. 1 87 [] 74.8 9.6e-21
CP000075_2444 1/1 493 561 .. 1 87 [] 73.2 2.6e-20
CP000075_3503 1/1 520 591 .. 1 87 [] 72.2 5.1e-20
CP000075_2049 1/1 653 721 .. 1 87 [] 71.1 1e-19
CP000075_0264 2/2 375 443 .. 1 87 [] 67.1 1.5e-18
CP000075_3374 1/1 242 308 .. 1 87 [] 66.2 2.6e-18
CP000075_1125 1/1 236 302 .. 1 87 [] 66.2 2.6e-18
CP000075_4338 1/1 431 496 .. 1 87 [] 65.8 3.3e-18
CP000075_0723 1/1 309 375 .. 1 87 [] 65.5 4.1e-18
CP000075_4820 1/1 132 197 .. 1 87 [] 65.2 4.8e-18
CP000075_2384 1/1 541 612 .. 1 87 [] 65.1 5.1e-18
CP000075_3963 1/1 243 308 .. 1 87 [] 65.1 5.3e-18
CP000075_1497 1/1 235 301 .. 1 87 [] 64.7 7e-18
CP000075_3714 1/1 308 373 .. 1 87 [] 64.5 7.8e-18
CP000075_3791 1/1 199 261 .. 1 87 [] 63.8 1.2e-17
CP000075_3773 1/1 170 235 .. 1 87 [] 63.4 1.6e-17
CP000075_1917 1/1 151 217 .. 1 87 [] 62.2 3.4e-17
CP000075_4438 1/1 152 218 .. 1 87 [] 60.6 1e-16
CP000075_3459 1/1 184 250 .. 1 87 [] 59.9 1.6e-16
CP000075_4798 1/1 242 308 .. 1 87 [] 59.5 2e-16
CP000075_2866 1/1 239 303 .. 1 87 [] 59.2 2.5e-16
CP000075_4068 1/1 211 277 .. 1 87 [] 59.1 2.6e-16
CP000075_1291 1/1 716 783 .. 1 87 [] 57.9 5.6e-16
CP000075_3590 1/1 229 293 .. 1 87 [] 56.6 1.3e-15
CP000075_1584 1/1 796 863 .. 1 87 [] 52.8 1.6e-14
CP000075_3511 1/1 238 303 .. 1 87 [] 52.8 1.6e-14
CP000075_3995 1/1 421 487 .. 1 87 [] 50.9 5.5e-14
CP000075_0831 1/1 756 822 .. 1 87 [] 49.6 1.3e-13
CP000075_0259 1/1 225 283 .. 1 87 [] 48.3 3e-13
CP000075_3354 1/1 272 340 .. 1 87 [] 47.5 5e-13
CP000075_3084 1/1 172 236 .. 1 87 [] 47.4 5.6e-13
CP000075_2447 1/1 168 241 .. 1 87 [] 46.6 8.9e-13
CP000075_5088 1/1 129 199 .. 1 87 [] 44.6 3.4e-12
CP000075_4936 1/1 370 438 .. 1 87 [] 43.7 5.9e-12
CP000075_2373 1/1 221 286 .. 1 87 [] 42.1 1.7e-11
CP000075_1777 1/1 584 652 .. 1 87 [] 38.3 2.1e-10
CP000075_3531 1/1 311 379 .. 1 87 [] 38.0 2.5e-10
CP000075_2449 1/1 305 373 .. 1 87 [] 38.0 2.5e-10
CP000075_2977 2/2 192 260 .. 1 87 [] 37.4 3.7e-10
CP000075_4088 1/1 412 502 .. 1 87 [] 36.7 5.9e-10
CP000075_3911 1/1 409 477 .. 1 87 [] 35.3 1.5e-09
CP000075_3993 1/1 363 431 .. 1 87 [] 32.5 9.1e-09
CP000075_4230 1/1 203 268 .. 1 87 [] 32.2 1.1e-08
CP000075_1111 1/1 277 323 .. 1 75 [. 31.8 1.4e-08
CP000075_1299 1/1 321 389 .. 1 87 [] 31.7 1.5e-08
CP000075_4372 1/1 674 744 .. 1 87 [] 31.3 2e-08
CP000075_2699 1/1 154 224 .. 1 87 [] 31.0 2.4e-08
CP000075_2030 1/1 140 192 .. 1 81 [. 30.7 3e-08
CP000075_3059 1/1 203 269 .. 1 87 [] 27.6 2.3e-07

Alignments of top-scoring domains:
CP000075_3697: domain 1 of 1, from 284 to 349: score 101.9, E = 2e-28
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHE+RTPL++I+g+++lL++ +el++ q
CP000075_3 284 IKSEFLANMSHEIRTPLNGILGFTHLLQK---------SELTPRQ-- 319

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+yl ti+++a+ ll++in++Ld+s+ieag
CP000075_3 320 ----------FDYLGTIEKSADNLLSIINEILDFSKIEAG 349

CP000075_1099: domain 2 of 2, from 315 to 383: score 97.9, E = 2.6e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ksefla++sHELRTPL+a++g++e+L++++ +++++ q
CP000075_1 315 MKSEFLATMSHELRTPLNAVIGFSEALRDGM------VGDMTDAQ-- 353

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+y+ i +++++ll+Lind+Ldls+ eag
CP000075_1 354 ----------RRYIGDIFNSGQHLLSLINDILDLSKVEAG 383

CP000075_4407: domain 1 of 1, from 396 to 461: score 91.0, E = 2.3e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak efla +sHE+RTP+++++g++elLl t+ls +q
CP000075_4 396 AKAEFLAKISHEIRTPMNGVLGMTELLLG---------TPLSVKQ-- 431

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+y++ti+++++ ll Lin++Ld++++e+g
CP000075_4 432 ----------RDYVQTIHSAGNELLTLINEILDITKLESG 461

CP000075_2020: domain 1 of 1, from 266 to 331: score 90.1, E = 4.2e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHELRTP+++++g+++lL++ t+++ eq
CP000075_2 266 AKSDFLAMMSHELRTPMNGVLGMLQLLET---------THMTHEQ-- 301

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
ey + +++e+llr ind+Ld+srie
CP000075_2 302 ----------SEYATLATESTEHLLRVINDILDFSRIERD 331

CP000075_1938: domain 1 of 1, from 404 to 468: score 86.4, E = 5e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aksefl+ +sHELRTPL++I+g+a+lL + + ++ q
CP000075_1 404 AKSEFLSRMSHELRTPLNSILGFAQLLDM----------DSPASQ-- 438

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r + ilr++++ll+Lin++Ld++rieag
CP000075_1 439 ----------RPQIGHILRAGQHLLKLINEVLDIARIEAG 468

CP000075_3611: domain 1 of 1, from 304 to 369: score 84.4, E = 1.8e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+s fla++sHE+RTPL++++g++ l l+ ++l++eq
CP000075_3 304 ARSAFLAHMSHEIRTPLNGLLGMLALSLD---------SPLGAEQ-- 339

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l +++++++ l +L+nd+Ld+s+ +ag
CP000075_3 340 ----------RQQLMIAHDSGKVLVELLNDILDMSKFDAG 369

CP000075_2112: domain 2 of 2, from 714 to 780: score 83.7, E = 2.8e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla++sHE+RTP++a++g++el+l+ +++ +e +
CP000075_2 714 AKSTFLATMSHEIRTPMNAVIGMLELALK--------RADHGELD-- 750

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r ++e+++++a+ ll+Li d+Ld++rie+g
CP000075_2 751 ----------RSAIEVAYSSANDLLDLIGDILDIARIESG 780

CP000075_2939: domain 1 of 1, from 641 to 706: score 83.4, E = 3.5e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks flan+sHE+RTP++a++g ++lL + t+l+++q
CP000075_2 641 AKSLFLANMSHEIRTPMNAVIGISHLLHN---------TALNDQQ-- 676

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l +++ +++ ll +ind+Ld+++ieag
CP000075_2 677 ----------RQLLTKLQIAGRTLLGIINDILDIAKIEAG 706

CP000075_5032: domain 1 of 1, from 205 to 272: score 83.3, E = 3.5e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+an+sHELRTPLt+I gy+e+Ll+++ +e ++
CP000075_5 205 MRKDFVANVSHELRTPLTVIFGYLETLLDNV-------DEVNPRW-- 242

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l+ +++++ r++ L+ndlL l+++ea
CP000075_5 243 ----------VRALQQMHQQGGRMQTLLNDLLLLAKLEAT 272

CP000075_3772: domain 1 of 1, from 173 to 238: score 74.8, E = 9.6e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++f+a l H+LR+PL aI + aelLl+ +l+e+
CP000075_3 173 LREQFIAVLGHDLRNPLFAINASAELLLR---------RPLDEKA-- 208

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++ il +++r ++L++d+Ld++r + g
CP000075_3 209 ----------QQIVQHILTSGQRASQLVDDVLDFARGRMG 238

CP000075_2444: domain 1 of 1, from 493 to 561: score 73.2, E = 2.6e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHELRTPL++ + +a+lL e ++l++eq
CP000075_2 493 YKSEFLANMSHELRTPLNSSLILAKLLAE------NPGENLTAEQ-- 531

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ e+i+++++ ll+Lind+Ld+s+ eag
CP000075_2 532 ----------VKFAESIYSAGNDLLNLINDILDISKVEAG 561

CP000075_3503: domain 1 of 1, from 520 to 591: score 72.2, E = 5.1e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++e++a +sH+LR+P+t+I++++ ++++ + +d++ ++ +
CP000075_3 520 ARDELVAVVSHDLRNPMTVISMLCGMMQKSF----SSDGPHTSRRI- 561

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++t++++a r++ L++dlLd s+ieag
CP000075_3 562 ----------STAIDTMQQAASRMNVLLEDLLDTSKIEAG 591

CP000075_2049: domain 1 of 1, from 653 to 721: score 71.1, E = 1e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+s +la++sH+LRTPLt++rg ++ Ll+ + ++ + e+r
CP000075_2 653 LRSALLASVSHDLRTPLTSMRGSIDSLLALG-------EAIPLEDR- 691

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+le ++eaerl+r i++lLd++r+++g
CP000075_2 692 ----------RELLEGTRDEAERLDRYIQNLLDMTRLGHG 721

CP000075_0264: domain 2 of 2, from 375 to 443: score 67.1, E = 1.5e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+sef+ +sHELRTP+t++ ++ lL+e + + +e r
CP000075_0 375 VRSEFVLRASHELRTPVTGMHMAFGLLQE--------RLHFAPESRE 413

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l+t+ +e +rl +LindlL +sr ++g
CP000075_0 414 ----------ADLLNTVTEEMQRLMQLINDLLNFSRYQNG 443

CP000075_3374: domain 1 of 1, from 242 to 308: score 66.2, E = 2.6e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f a+l+HE+RTP+ +++g+++++l+ +++s+++
CP000075_3 242 RLMQFSADLAHEIRTPVGSLMGHCQVALR---------QNRSADE-- 277

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+ +l + l+e+er++rL++ +L l+r+++
CP000075_3 278 ---------YQALLASNLEELERISRLVESILFLARADEA 308

CP000075_1125: domain 1 of 1, from 236 to 302: score 66.2, E = 2.6e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f a+++HELR PLt ++g ++++l+ +s+e+
CP000075_1 236 RLESFNADVAHELRSPLTNLIGQTQVALT---------RGRSAEH-- 271

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y e l++ l+e+erl+++ind+L l+ +++g
CP000075_1 272 ---------YFEVLQSNLEELERLRSIINDMLFLASADQG 302

CP000075_4338: domain 1 of 1, from 431 to 496: score 65.8, E = 3.3e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+efla+l HELRTP+++++g +e++++ ++++e
CP000075_4 431 LKDEFLATLTHELRTPMNGVIGSLEVMQT---------LDMDDEV-- 466

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ y +t+ ++a+ + ++in +L+l+ ++ag
CP000075_4 467 ----------EMYQQTAASSARDMMSMINGILTLTELQAG 496

CP000075_0723: domain 1 of 1, from 309 to 375: score 65.5, E = 4.1e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++++a+++HE+R+PL a++ +a+lL e ++els+ +
CP000075_0 309 ALGRLTAGIAHEIRNPLGAVSHAAQLLNE--------SEELSAAD-- 345

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++ ++i++++ r++r i+++L+lsr ++
CP000075_0 346 ----------RRLGQIIHEQSGRIDRVIENVLQLSRRREA 375

CP000075_4820: domain 1 of 1, from 132 to 197: score 65.2, E = 4.8e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++l+HE+++PL +Irg+a+lL + el+ee +
CP000075_4 132 TTKMLVRGLAHEIKNPLGGIRGAAQLLAR----------ELPEESL- 167

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y+++i++ea+rl++L++++L ++ +
CP000075_4 168 ----------KDYTNVIIEEADRLRNLVDRMLGSNKLPSL 197

CP000075_2384: domain 1 of 1, from 541 to 612: score 65.1, E = 5.1e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++e++a +sH+LR+P++ I++ + +++ ++ gdt+ +
CP000075_2 541 LRDELVAVVSHDLRNPMSIIIMQCGMMQSWA----VGDTHFENRNI- 582

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l ti++++ r+++L++dlLd ++ieag
CP000075_2 583 ----------RRALGTIEKATTRMNSLLEDLLDTAQIEAG 612

CP000075_3963: domain 1 of 1, from 243 to 308: score 65.1, E = 5.3e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+a+++HELRTPL+a+++ +el l+ e+++++
CP000075_3 243 RQAQFIADAAHELRTPLAALKARVELGLR----------ERDPQH-- 277

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+r le++ ++rl +L n+lL l+rie+g
CP000075_3 278 ---------WRSTLESAALGTDRLTHLANQLLSLARIENG 308

CP000075_1497: domain 1 of 1, from 235 to 301: score 64.7, E = 7e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s f a+++HELRTP++ +r+++e++l+ ++ +e
CP000075_1 235 RLSNFSADIAHELRTPISNLRTHTEVILA---------KKRAPEV-- 270

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+e l++ l+e++rl+ +i+ +L l++ ++g
CP000075_1 271 ---------YEENLSSNLEELNRLSGIIDGMLFLAKSDNG 301

CP000075_3714: domain 1 of 1, from 308 to 373: score 64.5, E = 7.8e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++e+++++sHELRTP++ +r+ +e+ + ++++e r
CP000075_3 308 IQRELVRAVSHELRTPVARLRFGLEMVSD----------AATPEAR- 343

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+y + ++++++ l++L++++L+++r+e+g
CP000075_3 344 ----------RKYMRGMDSDIQDLDKLVDEMLTYARLEQG 373

CP000075_3791: domain 1 of 1, from 199 to 261: score 63.8, E = 1.2e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++l ++sHELR PLt +++++ lL+ e+++
CP000075_3 199 SQQQLLHDISHELRSPLTRMSAAIGLLRQ-------------EPTQ- 231

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++le+i+re+er+++Li++lL+l+r+++
CP000075_3 232 ----------LDMLERIERESERMDSLIEELLTLARMQSD 261

CP000075_3773: domain 1 of 1, from 170 to 235: score 63.4, E = 1.6e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++ +sH+LR+PL+aI+++a lL++ t+l + q
CP000075_3 170 FAEQMIGIVSHDLRNPLAAIKMAAGLLER---------TPLESRQ-- 205

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l i ++++r +r+i dlLd++ ++ g
CP000075_3 206 ----------ERILGHINHSTDRADRMIVDLLDFTHARVG 235

CP000075_1917: domain 1 of 1, from 151 to 217: score 62.2, E = 3.4e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ fl l H+LRTPL+aI++ a++Ll+ ++l++
CP000075_1 151 SRNIFLGILGHDLRTPLSAILLGADVLLR--------THDLGARP-- 187

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++i+++++r ++++ dlLd++r + g
CP000075_1 188 ----------TKVASRIYSSVKRANQIVGDLLDFTRSQIG 217

CP000075_4438: domain 1 of 1, from 152 to 218: score 60.6, E = 1e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ fla l H+LR PL a+++ +elL + +l+e++
CP000075_4 152 SRDIFLAILGHDLRAPLQAVSMSTELLAR--------KITLDEKT-- 188

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ y+++i+ +++++ ++++dlL++ r + g
CP000075_4 189 ----------QSYVSRIQTSTRHMGSMVSDLLEFVRSRLG 218

CP000075_3459: domain 1 of 1, from 184 to 250: score 59.9, E = 1.6e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++a+l+H++RTPL+a + ya+ L e +el+ e++
CP000075_3 184 SLGRMVASLAHQIRTPLSAAMIYASHLTE---------QELPVETQ- 220

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ ++++ ++ l+++++d+L ++r e +
CP000075_3 221 ----------QRFAARLKDRLHELEHQVRDMLVFARGELP 250

CP000075_4798: domain 1 of 1, from 242 to 308: score 59.5, E = 2e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f +l+HELR P++ ++g a++ l ++++e+
CP000075_4 242 QLAQFSDDLAHELRSPMNNLMGRAQVTLS---------RPRPAEE-- 277

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+++le+ +e+er++r+i+++L l+ ++
CP000075_4 278 ---------YKQALESCTEELERMSRMISQMLFLASVSQP 308

CP000075_2866: domain 1 of 1, from 239 to 303: score 59.2, E = 2.5e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ef+a++sHELRTPL+++rg +e++++ + ++ +q
CP000075_2 239 MRREFMADVSHELRTPLSVLRGELEAIED---------GVRTLDQ-- 274

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++ e+ l++L++dl +ls ++ g
CP000075_2 275 -----------ASMKSLQGEVGMLSKLVDDLYELSLADVG 303

CP000075_4068: domain 1 of 1, from 211 to 277: score 59.1, E = 2.6e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + f++++sHELRTPL ++ +elLle+ ++l+
CP000075_4 211 RERMFTSDVSHELRTPLMVLASSCELLLEN--------PALDLRG-- 247

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ +e+i r+ e +++L++ +L l+r + +
CP000075_4 248 ----------RRQVERIGRACEEMRDLVQTFLMLARTQRE 277

CP000075_1291: domain 1 of 1, from 716 to 783: score 57.9, E = 5.6e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla++sHE+RTP+ aI+g++el e++ ++ ++++++
CP000075_1 716 AKSAFLASMSHEIRTPMGAIIGLLELECEQA----LRLGTMPSQG-- 756

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l++++r+a l +Li + Ldl+rieag
CP000075_1 757 -------------LQVAHRSATELVALIGESLDLARIEAG 783

CP000075_3590: domain 1 of 1, from 229 to 293: score 56.6, E = 1.3e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++l+++sHELR PL+ +r ++ l+++ + ++e
CP000075_3 229 SQRQLLRDVSHELRSPLARLRIALALAER----------AEPAER-- 263

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ ++ re +rl++Li+++L l+r++a+
CP000075_3 264 ----------EKLWPRLGRECDRLEALISEILALARLDAE 293

CP000075_1584: domain 1 of 1, from 796 to 863: score 52.8, E = 1.6e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++fla++sH+L +PL+a r+++ +L ++ + s++
CP000075_1 796 SKTRFLAAVSHDLMQPLNAARLFSAALSHQQ-------EGISSDA-- 833

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++ +++++++ ++Li+dlLd+srie+g
CP000075_1 834 ----------QQLVRHLDSSLRSAEDLISDLLDISRIENG 863

CP000075_3511: domain 1 of 1, from 238 to 303: score 52.8, E = 1.6e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++f+a+++HELRTPLt +r +a+ ++ + ++eqr
CP000075_3 238 RERRFIADAAHELRTPLTILRIHAQNARQ----------AETPEQR- 273

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+l+ + + ++r rL ++lL+++r+e
CP000075_3 274 ----------LEALDFLVHGVDRAARLASQLLTMARLEPR 303

CP000075_3995: domain 1 of 1, from 421 to 487: score 50.9, E = 5.5e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+Ir ++lL+ ++l e r
CP000075_3 421 AIGQLTGGVAHDFNNLLTVIRSCSDLLKS---------PNLEEHRR- 457

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+y+e i + ++r rL +lL ++r +a
CP000075_3 458 ----------VKYVEAISSTVDRAARLTGQLLAFARRQAL 487

CP000075_0831: domain 1 of 1, from 756 to 822: score 49.6, E = 1.3e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++a+++HE+ +P+t+I +a+ L+e + + ++
CP000075_0 756 SIGRLAAGVAHEIGNPITGIACLAQNLRE---------EREEDGEL- 792

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+ + il++++r +r+++ l+ ++ ++a
CP000075_0 793 ----------KEISSQILEQTKRVSRIVQSLMSFAHAGAH 822

CP000075_0259: domain 1 of 1, from 225 to 283: score 48.3, E = 3e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ +la++sH+LRTPLt +r+ +el+ +
CP000075_0 225 ERELMLAGVSHDLRTPLTRLRLSLELMND------------------ 253

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ e + r++e ++++++++L + r +
CP000075_0 254 ----------NEFSEGMVRDIEDMDAILDQFLAFIRDGRD 283

CP000075_3354: domain 1 of 1, from 272 to 340: score 47.5, E = 5e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+I g +elL++++ ++ r
CP000075_3 272 AVGQLTGGIAHDFNNLLTGITGSLELLKTRV-----------SQGRF 307

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+eL +yl ++++++r +L +lL +sr ++
CP000075_3 308 NEL-------DRYLGAAQDASKRAASLTHRLLAFSRRQTL 340

CP000075_3084: domain 1 of 1, from 172 to 236: score 47.4, E = 5.6e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ se a+++HELRTPL+a +g ++ + +e++ +++ q
CP000075_3 172 EVSESSAMIAHELRTPLNAAMGRIQGMIDEVF-------PRDLAQ-- 209

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
le ++r++ +l++L++dl ls + ag
CP000075_3 210 -------------LEMVHRQLGQLNKLVSDLHLLSLASAG 236

CP000075_2447: domain 1 of 1, from 168 to 241: score 46.6, E = 8.9e-13
*->akseflanlsHELRTPLtaIrgyael.....Lleeldkvlagdtels
++++f++ +sHE RTPL+++++ ++l++ + +++++ ++ +
CP000075_2 168 MRDDFMSIVSHEVRTPLNGLILETQLrklhlAKDNA-------AAFT 207

eeqrlpeLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e++ r ++++ +r++++l rLi+d+Ld sri++g
CP000075_2 208 MEKL-----------RAMVDRDERQIQSLIRLIEDMLDVSRIRTG 241

CP000075_5088: domain 1 of 1, from 129 to 199: score 44.6, E = 3.4e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++e++a+++HE ++PL+aI + +++++l ++ + +++
CP000075_5 129 QLGELTASIAHEVNQPLSAIVTSGNACQRWLA-----TEPVNLDKA- 169

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+++e+++++a+r ++i +++ l++ +
CP000075_5 170 ----------RQAVERMISDANRAGDIIVRVRALAKRSST 199

CP000075_4936: domain 1 of 1, from 370 to 438: score 43.7, E = 5.9e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ + a++sHEL++PL+aIr yae ++ ld + ++e+
CP000075_4 370 ALGTMSASISHELNQPLAAIRSYAENAEVLLD------HQRTEDA-- 408

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r l+ i + + r+ ++i l+ ++r +
CP000075_4 409 ----------RGNLKLISELTGRMASIIAHLRAFARRDRH 438

CP000075_2373: domain 1 of 1, from 221 to 286: score 42.1, E = 1.7e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + +l +sHE+RTP+++I+g++++L + ++l++
CP000075_2 221 RERALLDQASHEFRTPIAVISGALDILAR---------QKLPPRA-- 256

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l++++ +e l ++ lL lsr
CP000075_2 257 ----------APPLQRMRATVENLTEIMVALLYLSREPLT 286

CP000075_1777: domain 1 of 1, from 584 to 652: score 38.3, E = 2.1e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +l+H++++ L++I+g++el+ ++ + + ++e +
CP000075_1 584 AVGQLTGGLAHDFNNLLAGISGALELMGTRIE-----QGRWGEVD-- 623

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+y+ t++ +a+r +L +lL +sr ++
CP000075_1 624 -----------KYIVTAQGAAKRAAALTHRLLAFSRRQTL 652

CP000075_3531: domain 1 of 1, from 311 to 379: score 38.0, E = 2.5e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ L++I+g +el+ + l
CP000075_3 311 AVGQLTGGIAHDFNNLLAGISGSLELITK----------RLAQGR-- 345

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + +y+++++ +++r +L +lL +sr ++
CP000075_3 346 ------VGDVDRYVSVAQGAVRRAASLTHRLLAFSRRQTL 379

CP000075_2449: domain 1 of 1, from 305 to 373: score 38.0, E = 2.5e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ Lt+I+g +el++++l ++e+
CP000075_2 305 AVGQLTGGIAHDFNNMLTGIIGSLELIRRRLA------RGRTEDL-- 343

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ +a+r +L +lL +sr ++
CP000075_2 344 ----------NSLIDLGVTSANRAAALTHRLLAFSRRQSL 373

CP000075_2977: domain 2 of 2, from 192 to 260: score 37.4, E = 3.7e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +++H++++ L++++g++++++ ++ ++ ++
CP000075_2 192 AIGQLTGGIAHDFNNVLSGVIGALDMIRLRV-------AAGRIGEV- 230

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++yl+ + ++a+r +L ++lL+++r ++
CP000075_2 231 ----------ARYLDAAASSANRAAALTRRLLTFARRQSL 260

CP000075_4088: domain 1 of 1, from 412 to 502: score 36.7, E = 5.9e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + ++a+++HE+++PL aI+ +++ ++++l + +++ eq+
CP000075_4 412 SVGGLAAGMAHEINNPLGAILHNVQNIRRRL----SPELPKNIEQA- 453

peLRl.............edpeyreyletilreaerllrLindlLdlsri
+ ++ + + ++ e +e+ ++l+ i++++ r ++++ +L +sr+
CP000075_4 454 ----EadgidlaqvnhylESREVPKLLDGIQQAGARAAKIVSHMLNFSRL 499

eag<-*
+
CP000075_4 500 SSR 502

CP000075_3911: domain 1 of 1, from 409 to 477: score 35.3, E = 1.5e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +++ +++HEL++PL+a+r+++ ++l + +++
CP000075_3 409 AIGQMSTSIAHELNQPLAALRTLSGNTVRFL-------ERGALDTA- 447

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l+ti + ++r+ r+ l+ ++r +
CP000075_3 448 ----------STNLRTINDLVDRMGRITASLRAFARRGDD 477

CP000075_3993: domain 1 of 1, from 363 to 431: score 32.5, E = 9.1e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++++ a+l+HE+++PLta r+ + +L+ l ++ r+
CP000075_3 363 ALGQMSAALAHEINQPLTAQRMQLATLRL-----------LLDQGRI 398

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+ ++l +++++ r+ +L + l +++r
CP000075_3 399 DEA-------CKALVPVDQQLTRMAALTSHLKTFARKSPS 431

CP000075_4230: domain 1 of 1, from 203 to 268: score 32.2, E = 1.1e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +a+++HEL TPL++++ +++ ++ + s++ +
CP000075_4 203 AVATQAAGAAHELGTPLATMSVLLKEMRQ----------DHSDPAL- 238

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l++++++++++ + +++l + +
CP000075_4 239 ----------QDDLSVLQEQVKQCKQTLQQLVRAAEANRR 268

CP000075_1111: domain 1 of 1, from 277 to 323: score 31.8, E = 1.4e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++++++sH+LRTP+t +r+ +elL++
CP000075_1 277 ERGQLFSAISHDLRTPITRLRLRVELLED------------------ 305

peLRledpeyreyletilreaerllrLi<-*
+++ ++ r+++ l+ L+
CP000075_1 306 ----------EQLQRKFSRDLDELELLV 323

CP000075_1299: domain 1 of 1, from 321 to 389: score 31.7, E = 1.5e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++ +l+H++++ L ++ g+ elLl + e +
CP000075_1 321 AVGQLTGGLAHDFNNLLMGVTGNMELLLS---------RIRQERFT- 357

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e +y++ +l+ ++r +L +lL +sr ++
CP000075_1 358 --------ELDRYINAALEGSRRAASLTHRLLAFSRRQTL 389

CP000075_4372: domain 1 of 1, from 674 to 744: score 31.3, E = 2e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++e+ +l+HE+++PL+++r+++ l++l g+++ + e +
CP000075_4 674 TLGEMSTGLAHEINQPLNVMRMAVVNVLKRL-----GRGDVDIEYL- 714

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e l++i+ +++r r ++ ++ + r +
CP000075_4 715 ----------TEKLNRIDTQVQRAARVVDHMRVFGRRSEV 744

CP000075_2699: domain 1 of 1, from 154 to 224: score 31.0, E = 2.4e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++++ +++H++++ L ++ gy++l+ +a+ + + + +
CP000075_2 154 ALGQLTGGIAHDFNNLLQVMGGYIDLIGS-----AAEKPVIDVQRV- 194

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++ +++++er + L +lL ++r +
CP000075_2 195 ----------QRSVHHAKSAVERASTLTKQLLAFARKQKL 224

CP000075_2030: domain 1 of 1, from 140 to 192: score 30.7, E = 3e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++la++sH+LRTPL+ +++ +e ++e
CP000075_2 140 QRGRMLAAVSHDLRTPLSRLKLRVEQIEE------------------ 168

peLRledpeyreyletilreaerllrLindlLdl<-*
++ + ++++ + ++++ L +
CP000075_2 169 ----------PRLHGQMTQDLNDMISMLDATLAY 192

CP000075_3059: domain 1 of 1, from 203 to 269: score 27.6, E = 2.3e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++a+++H++++ L a+++ ++l+++ ++ ++ +
CP000075_3 203 SLGMLTASIAHDFNNLLQALSASLQLIRM--------RSRRPTDV-- 239

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + +t lr++++ ++L+ +lL r +
CP000075_3 240 ----------ETLSDTGLRAVDHGRQLVTRLLNSVRQDGS 269


Histogram of all scores:
score obs exp (one = represents 18 sequences)
----- --- ---
-14 6 0|=
-13 48 3|*==
-12 175 116|======*===
-11 456 603|========================== *
-10 775 1119|============================================ *
-9 1015 1155|========================================================= *
-8 889 865|================================================*=
-7 654 545|==============================*======
-6 412 313|=================*=====
-5 280 172|=========*======
-4 139 92|=====*==
-3 68 48|==*=
-2 46 25|=*=
-1 32 13|*=
0 14 6|*
1 8 3|*
2 4 1|*
3 3 0|=
4 1 0|=
5 2 0|=
6 0 0|
> 7 62 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 390.1727
P(chi-square) = 0

Total sequences searched: 5136

Whole sequence top hits:
tophits_s report:
Total hits: 58
Satisfying E cutoff: 58
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 58
Satisfying E cutoff: 58
Total memory: 44K


Acknowledgements:

This research is funded by:

Developed by: