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Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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41 projects found  

1 accessions found for Bacteroides vulgatus ATCC 8482  

Data for CP000139  

Available Atlases
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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP000139.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP000139_2654 CDS_3490976-3487839 86.2 4.4e-24 1
CP000139_2645 CDS_3469425-3471428 84.1 1.7e-23 1
CP000139_3857 CDS_4902356-4904206 83.1 3.3e-23 1
CP000139_0998 CDS_1374729-1372306 82.8 4.1e-23 1
CP000139_3869 CDS_4918709-4916364 79.8 2.9e-22 1
CP000139_2820 CDS_3682397-3686800 74.5 9.3e-21 1
CP000139_3150 CDS_4081627-4080158 72.7 2.8e-20 1
CP000139_1762 CDS_2354073-2358473 68.7 4e-19 1
CP000139_3776 CDS_4813005-4813646 66.8 1.4e-18 1
CP000139_0147 CDS_227986-223706 64.9 4.6e-18 1
CP000139_1097 CDS_1527345-1531331 60.9 6.4e-17 1
CP000139_3968 CDS_5038256-5040037 58.7 2.8e-16 1
CP000139_0016 CDS_19642-18074 55.2 2.6e-15 1
CP000139_0369 CDS_552162-554729 55.0 3.1e-15 2
CP000139_2021 CDS_2700262-2704221 54.8 3.4e-15 1
CP000139_1617 CDS_2152587-2155313 54.7 3.8e-15 1
CP000139_0492 CDS_724801-728823 52.5 1.5e-14 1
CP000139_0723 CDS_1041795-1037758 51.9 2.3e-14 1
CP000139_2156 CDS_2877712-2881662 51.1 3.9e-14 1
CP000139_0802 CDS_1128262-1126877 50.4 6.1e-14 1
CP000139_0806 CDS_1138120-1134080 49.8 8.9e-14 1
CP000139_2095 CDS_2791712-2787645 49.6 1e-13 2
CP000139_0352 CDS_527216-522894 49.1 1.4e-13 1
CP000139_1273 CDS_1762766-1761219 49.1 1.4e-13 1
CP000139_2894 CDS_3783070-3784356 48.9 1.6e-13 1
CP000139_0966 CDS_1328050-1332276 47.4 4.2e-13 1
CP000139_2085 CDS_2770867-2766797 47.1 5.1e-13 1
CP000139_0581 CDS_865378-861218 46.5 7.9e-13 1
CP000139_0033 CDS_45200-49249 46.5 7.9e-13 1
CP000139_0522 CDS_769851-773783 46.4 8.4e-13 1
CP000139_0658 CDS_958490-956103 44.4 3e-12 1
CP000139_1509 CDS_2041149-2043536 44.4 3e-12 1
CP000139_1111 CDS_1549211-1553194 39.8 6.3e-11 1
CP000139_3714 CDS_4731665-4735654 31.5 1.4e-08 1
CP000139_2106 CDS_2810248-2812614 28.5 9.5e-08 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP000139_2654 1/1 685 750 .. 1 87 [] 86.2 4.4e-24
CP000139_2645 1/1 445 511 .. 1 87 [] 84.1 1.7e-23
CP000139_3857 1/1 255 320 .. 1 87 [] 83.1 3.3e-23
CP000139_0998 1/1 581 646 .. 1 87 [] 82.8 4.1e-23
CP000139_3869 1/1 421 486 .. 1 87 [] 79.8 2.9e-22
CP000139_2820 1/1 939 1005 .. 1 87 [] 74.5 9.3e-21
CP000139_3150 1/1 266 334 .. 1 87 [] 72.7 2.8e-20
CP000139_1762 1/1 945 1011 .. 1 87 [] 68.7 4e-19
CP000139_3776 1/1 1 60 [. 9 87 .] 66.8 1.4e-18
CP000139_0147 1/1 896 962 .. 1 87 [] 64.9 4.6e-18
CP000139_1097 1/1 820 887 .. 1 87 [] 60.9 6.4e-17
CP000139_3968 1/1 369 436 .. 1 87 [] 58.7 2.8e-16
CP000139_0016 1/1 292 360 .. 1 87 [] 55.2 2.6e-15
CP000139_2021 1/1 839 905 .. 1 87 [] 54.8 3.4e-15
CP000139_1617 1/1 396 462 .. 1 87 [] 54.7 3.8e-15
CP000139_0369 2/2 337 402 .. 1 87 [] 53.9 6.2e-15
CP000139_0492 1/1 830 896 .. 1 87 [] 52.5 1.5e-14
CP000139_0723 1/1 828 894 .. 1 87 [] 51.9 2.3e-14
CP000139_2156 1/1 819 885 .. 1 87 [] 51.1 3.9e-14
CP000139_0802 1/1 232 300 .. 1 87 [] 50.4 6.1e-14
CP000139_0806 1/1 833 899 .. 1 87 [] 49.8 8.9e-14
CP000139_0352 1/1 920 979 .. 8 87 .] 49.1 1.4e-13
CP000139_1273 1/1 285 353 .. 1 87 [] 49.1 1.4e-13
CP000139_2894 1/1 215 281 .. 1 87 [] 48.9 1.6e-13
CP000139_0966 1/1 893 958 .. 1 87 [] 47.4 4.2e-13
CP000139_2085 1/1 839 905 .. 1 87 [] 47.1 5.1e-13
CP000139_2095 1/2 837 903 .. 1 87 [] 46.5 7.9e-13
CP000139_0581 1/1 873 936 .. 1 87 [] 46.5 7.9e-13
CP000139_0033 1/1 811 876 .. 1 87 [] 46.5 7.9e-13
CP000139_0522 1/1 791 857 .. 1 87 [] 46.4 8.4e-13
CP000139_0658 1/1 301 366 .. 1 87 [] 44.4 3e-12
CP000139_1509 1/1 301 366 .. 1 87 [] 44.4 3e-12
CP000139_1111 1/1 813 876 .. 1 87 [] 39.8 6.3e-11
CP000139_3714 1/1 806 872 .. 1 87 [] 31.5 1.4e-08
CP000139_2106 1/1 316 381 .. 1 87 [] 28.5 9.5e-08

Alignments of top-scoring domains:
CP000139_2654: domain 1 of 1, from 685 to 750: score 86.2, E = 4.4e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks flan+sHE+RTPL+aI+g++ +L + +e e+
CP000139_2 685 LKSAFLANMSHEIRTPLNAIIGFSNILAA---------AEEEQEK-- 720

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ey+++i++ ll+Li+d+Ldls+ieag
CP000139_2 721 ----------QEYINIIESNNTLLLQLISDILDLSKIEAG 750

CP000139_2645: domain 1 of 1, from 445 to 511: score 84.1, E = 1.7e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ flan+sHE+RTPL+aI g++++L ++ s+ ++
CP000139_2 445 LKTAFLANMSHEIRTPLNAIVGFSSVLVS---------DDSSPAEK- 481

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y ++i++ ++ ll+Lind+Ld+sr+e+g
CP000139_2 482 ----------EQYCDIIQKNSDLLLHLINDILDISRMESG 511

CP000139_3857: domain 1 of 1, from 255 to 320: score 83.1, E = 3.3e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks flan+sHE+RTPL+aI+g++ ++ e te ee
CP000139_3 255 LKSAFLANMSHEIRTPLNAILGFSRIIAE---------TENAEER-- 290

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+y +++++ rl++Lin++Ldls+ie+g
CP000139_3 291 ----------LQYYDIVEKNNMRLQELINEILDLSKIESG 320

CP000139_0998: domain 1 of 1, from 581 to 646: score 82.8, E = 4.1e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks flan+sHE+RTPL+aI g+++lL e + + ++r
CP000139_0 581 LKSAFLANMSHEIRTPLNAIVGFSSLLTE----------TEDMKDR- 616

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y ++++ +e ll+Li+d+Ldls++e+g
CP000139_0 617 ----------KQYMAIVQENTELLLQLISDILDLSKMESG 646

CP000139_3869: domain 1 of 1, from 421 to 486: score 79.8, E = 2.9e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ flan+sHE+RTPL+aI g+++l+ ++ e++
CP000139_3 421 LKTAFLANMSHEIRTPLNAIVGFSHLMTI---------ADNAEDE-- 456

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ y ++i + +e ll+Lind+Ldl++ieag
CP000139_3 457 ----------KLYSDIINQNSEILLQLINDILDLAKIEAG 486

CP000139_2820: domain 1 of 1, from 939 to 1005: score 74.5, E = 9.3e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k +f+ n+sHELRTPLt I+g ++ L+e ++ls +
CP000139_2 939 LKIKFFTNISHELRTPLTLIQGPIQELRE--------KEKLSQKG-- 975

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+y++ +++ ++++l+L+n++Ld+ +i++g
CP000139_2 976 ----------MQYVDLMEKNTKQMLQLVNQILDFRKIQNG 1005

CP000139_3150: domain 1 of 1, from 266 to 334: score 72.7, E = 2.8e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ f++++sHEL+TP++aI++ ++lL++ ++ ++l+eeq
CP000139_3 266 AKTTFISTISHELKTPISAIMMSLQLLED------QRIGALNEEQ-- 304

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ ++i++ +erll++ +lL +++ e+g
CP000139_3 305 ----------EDLANSIKENSERLLNITGELLNMTQVESG 334

CP000139_1762: domain 1 of 1, from 945 to 1011: score 68.7, E = 4e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k +f+ n+sHELRTPLt I g +e l++ +l+++
CP000139_1 945 IKLRFFTNISHELRTPLTLIAGPVEYVLKN--------KTLPDDV-- 981

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re l++++r ++r+lrL+n++Ld+ +i+ +
CP000139_1 982 ----------REQLHVVERNTDRMLRLVNQILDFRKIQKN 1011

CP000139_3776: domain 1 of 1, from 1 to 60: score 66.8, E = 1.4e-18
*->lsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrlpeLRledp
+sHE+RTPL+aI g++ lL + + + see++
CP000139_3 1 MSHEIRTPLNAIVGFSNLLTT--------EKNISEEEK--------- 30

eyreyletilreaerllrLindlLdlsrieag<-*
+e+ ++i++ ++ ll+L+nd+L+lsrie+g
CP000139_3 31 --KEFASIIDNNTRLLLKLVNDVLELSRIESG 60

CP000139_0147: domain 1 of 1, from 896 to 962: score 64.9, E = 4.6e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k f+ n+sHE+RTPLt I+g++e ++++ ++ + e
CP000139_0 896 YKLVFFTNISHEFRTPLTLIQGALEKMQRG--------GKIPKEM-- 932

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l++++++++r+lrLin+lL++ +++++
CP000139_0 933 ----------AYSLKVMDKSTQRMLRLINQLLEFRKMQNN 962

CP000139_1097: domain 1 of 1, from 820 to 887: score 60.9, E = 6.4e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak +f+ +++HE+RTP++ I+g +e + + ++ s + +
CP000139_1 820 AKIKFFTMIAHEIRTPVSLIIGPLEKIMK---------SPVSLPST- 856

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+r+ l++i+r ++rll L+n+lLd+ + e++
CP000139_1 857 ---------VRDDLNIIDRNSQRLLFLVNQLLDFRKVEQE 887

CP000139_3968: domain 1 of 1, from 369 to 436: score 58.7, E = 2.8e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k +++ n++HEL+TP+++I+gy+e++ ++ ++l+ e++
CP000139_3 369 LKKQLTQNIAHELKTPVSSIQGYLETIVNN--------PTLPREKI- 406

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+le+ + +++rl +L++d+ l+r+e+
CP000139_3 407 ----------NAFLERSYAQSNRLAHLLRDISVLTRMEEA 436

CP000139_0016: domain 1 of 1, from 292 to 360: score 55.2, E = 2.6e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f+ n+ HE++TP+++I+++a++L++ ++ + +
CP000139_0 292 IKNDFINNMTHEFKTPISTISLAAQMLKD---------PAVGKSPA- 328

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ + +i +e++rl+ +++ +L++s e +
CP000139_0 329 --------MFQHISGVINDETKRLRFQVEKVLQMSMFEKQ 360

CP000139_2021: domain 1 of 1, from 839 to 905: score 54.8, E = 3.4e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k +f+ ++ HELRTPLt I+ +e+L +e+ +s+ +
CP000139_2 839 MKLKFFTHVGHELRTPLTLIISPLETLMKEY---------QSDAAL- 875

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l++++r a rll+L+n+lLd+ +i+ +
CP000139_2 876 ----------MDKLNIVQRNALRLLNLVNQLLDFRKIDVN 905

CP000139_1617: domain 1 of 1, from 396 to 462: score 54.7, E = 3.8e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak f+ n+sH++RTPLt + +e Lle d +l+++q
CP000139_1 396 AKLVFFTNVSHDFRTPLTLVADPVEQLLE--------DKDLTSKQ-- 432

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +l+++++ ++ llrL+n++Ld+ + e+g
CP000139_1 433 ----------RSLLKVVHKNVNILLRLVNQILDFRKYENG 462

CP000139_0369: domain 2 of 2, from 337 to 402: score 53.9, E = 6.2e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++++ ++ H+++ P+ +I+gy++lL++ +ee +
CP000139_0 337 AREKLMLTITHDIKAPVGSILGYTDLLER----------ITTEERQ- 372

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r yl+ ++++a++ll+L+ lLd+ r++a
CP000139_0 373 ----------RFYLNNMQSSANHLLSLVKSLLDYHRLDAH 402

CP000139_0492: domain 1 of 1, from 830 to 896: score 52.5, E = 1.5e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f n+ HELRTPLt I+g +e Ll d++ls+++
CP000139_0 830 ERLRFYTNITHELRTPLTLILGPLEDLLS--------DATLSPKH-- 866

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++i+++a rll+Lin++L++ + e++
CP000139_0 867 ----------ANKISIIHDSATRLLNLINRILEFRKTETQ 896

CP000139_0723: domain 1 of 1, from 828 to 894: score 51.9, E = 2.3e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k f+ ++HE RTPLt I g +e+++e + ++++
CP000139_0 828 SKVSFFTEIAHEVRTPLTLINGPLEAIEE---------MDIKDQKL- 864

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l++i + ++rll+L +lLd+ +i+a
CP000139_0 865 ----------NKNLKVIGQNTKRLLDLTGQLLDFQKIGAS 894

CP000139_2156: domain 1 of 1, from 819 to 885: score 51.1, E = 3.9e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak +f+ n++HE+RTPLt I+ +e l +++ s++
CP000139_2 819 AKIDFFTNVAHEIRTPLTLIKSPLENVLV--------SPNVSADI-- 855

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ le++ + rll+L+n+lLd+ + e+
CP000139_2 856 ----------RDDLEIMNLNTTRLLDLVNQLLDFRKTETR 885

CP000139_0802: domain 1 of 1, from 232 to 300: score 50.4, E = 6.1e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f ++ HE++TPL+ I++ + +L+ ++ + +++
CP000139_0 232 MREDFSYAMIHEMKTPLACILMGTRMLKS------GKLDIFPDKR-- 270

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++++++e+e+ll+L n +L+ls++e+
CP000139_0 271 ----------EKHFQILEDESEHLLSLTNKVLTLSKLENA 300

CP000139_0806: domain 1 of 1, from 833 to 899: score 49.8, E = 8.9e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f n+ HELRTPLt I+g +e +++ + ls ++
CP000139_0 833 ERLRFYTNITHELRTPLTLILGPLEDMQK--------SNSLSGKD-- 869

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++i+++a rll+Lin++L++ + e++
CP000139_0 870 ----------SQKISVIHQSAIRLLNLINQILEFRKTETQ 899

CP000139_0352: domain 1 of 1, from 920 to 979: score 49.1, E = 1.4e-13
*->nlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrlpeLRled
++sHELRTPLt I+g ++ l ++l++ +
CP000139_0 920 DISHELRTPLTLISGPVSEVLS--------QEPLTSRT--------- 949

peyreyletilreaerllrLindlLdlsrieag<-*
r l+ +++ ++r+l Lin++Ld+ +i++
CP000139_0 950 ---RHHLQLVQKNINRMLLLINQVLDFRKIQNK 979

CP000139_1273: domain 1 of 1, from 285 to 353: score 49.1, E = 1.4e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++f+ n+ HEL+TP+++ ++ ++Ll+ + g ++l+ q
CP000139_1 285 MKEDFTHNITHELKTPIAVAYAANDALLN-----FNGAENLTKRQ-- 324

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yl++i+ ++++l+ L++++L +s +
CP000139_1 325 -----------NYLQIIQTQLKQLSGLVEQILSMSMEQRK 353

CP000139_2894: domain 1 of 1, from 215 to 281: score 48.9, E = 1.6e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+ n+sHE+ TPL+ r +e+L e d++lse q
CP000139_2 215 QQKQFIGNASHEMQTPLAICRNRLEMLME--------DENLSESQ-- 251

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e l + ++ +e++ +L lL ls+ie+g
CP000139_2 252 ----------LEELMKTHQTLEHITKLNKSLLLLSKIENG 281

CP000139_0966: domain 1 of 1, from 893 to 958: score 47.4, E = 4.2e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k f+ n+ HE+RTPLt I g +e +l+ +++ +
CP000139_0 893 DKLAFFTNITHEFRTPLTLIVGPIERALK---------LSYNPQVI- 929

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e l+ ++r +++ll+L+n+l+d+ + e+g
CP000139_0 930 -----------EQLHFVERNSKYLLSLVNQLMDFRKVESG 958

CP000139_2085: domain 1 of 1, from 839 to 905: score 47.1, E = 5.1e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f n++HELRTPLt I+g +e L++ ++s ++
CP000139_2 839 ERLRFYTNIAHELRTPLTLIIGPLEDLKD----------NRSMPTP- 874

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+r ++ti+r+a +ll+Lin+l+++ + e++
CP000139_2 875 ---------FRTKIQTIYRSAVQLLNLINQLMEFRKTETQ 905

CP000139_2095: domain 1 of 2, from 837 to 903: score 46.5, E = 7.9e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f n++HELRTPLt I+g +e L++ +++ + +
CP000139_2 837 ERLRFYTNIAHELRTPLTLIIGPLEDLKD----------NKGIPAA- 872

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+r ++ti+r+a +ll+Lin+l+++ + e++
CP000139_2 873 ---------FRTKIQTIYRSAVQLLNLINQLMEFRKTETQ 903

CP000139_0581: domain 1 of 1, from 873 to 936: score 46.5, E = 7.9e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak +f+ n+ HEL TPL+ I++ ++ L+ e+ ++ s+
CP000139_0 873 AKLQFFTNITHELLTPLSIISASVDELKQEV-------PASSSVC-- 910

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++i + + rl rLi+++L++ + e+g
CP000139_0 911 --------------SVIADNTVRLIRLIQQILEFRKVENG 936

CP000139_0033: domain 1 of 1, from 811 to 876: score 46.5, E = 7.9e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak +f+ n+sHE+RTP++ I+ ++ L + + + e
CP000139_0 811 AKLQFFINISHEIRTPMSLIISPLQKLMT---------NDTDHER-- 846

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++i r +er+lrL+n+l+d+ +i+ g
CP000139_0 847 ----------QKNYRIIWRNSERILRLVNQLMDIRKIDKG 876

CP000139_0522: domain 1 of 1, from 791 to 857: score 46.4, E = 8.4e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k +fl n+sHELRTPLt I + ++ L ++l +++ e
CP000139_0 791 EKVRFLINISHELRTPLTLIHAPLKQLMDKL--------TADNEN-- 827

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++i +++er+ +++n +L ++e g
CP000139_0 828 ----------YPLIQSICKQSERMKNILNTVLNVRKMEVG 857

CP000139_0658: domain 1 of 1, from 301 to 366: score 44.4, E = 3e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ + + ++sH++R PL I +el+ e ++ ++r
CP000139_0 301 MRKQIILTISHDIRGPLGNINNCVELASE----------TREKKKR- 336

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ yle i+++ +++l+L+n+l+d +i +
CP000139_0 337 ----------EGYLENIRHSCRHILNLVNNLMDVYKINET 366

CP000139_1509: domain 1 of 1, from 301 to 366: score 44.4, E = 3e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ + + ++sH++R PL I +el+ e ++ ++r
CP000139_1 301 MRKQIILTISHDIRGPLGNINNCVELASE----------TREKKKR- 336

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ yle i+++ +++l+L+n+l+d +i +
CP000139_1 337 ----------EGYLENIRHSCRHILNLVNNLMDVYKINET 366

CP000139_1111: domain 1 of 1, from 813 to 876: score 39.8, E = 6.3e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k + n+sHEL TPLt+I+ ++ L+
CP000139_1 813 TKLNYFTNISHELLTPLTVISCITDHLEQ------------------ 841

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+p +r+ ++++ a+ l rLi+++Ld+ +++ g
CP000139_1 842 -----KVPAIRQQSVILKSNADKLKRLIQQILDFRKMDVG 876

CP000139_3714: domain 1 of 1, from 806 to 872: score 31.5, E = 1.4e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ n +H++RTPLt I++ +e ++ ++lsee
CP000139_3 806 ERTRFFINTAHDIRTPLTLIKAPLEEIQQ--------KENLSEES-- 842

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ t+ + ++ l rL +l +s++
CP000139_3 843 ----------QANMLTAMKNVDTLIRLTTNLINFSKANVY 872

CP000139_2106: domain 1 of 1, from 316 to 381: score 28.5, E = 9.5e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++ ++sH+LR PL ++ +ael++ e+++ +
CP000139_2 316 SRRNLMLSVSHDLRAPLGTVCEFAELMQH----------EKDAGLV- 351

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+ il+++++ L n+l + r+e+g
CP000139_2 352 ----------REFAANILHASRHVIGLANNLQHYYRLEEG 381


Histogram of all scores:
score obs exp (one = represents 14 sequences)
----- --- ---
-15 1 0|=
-14 24 0|==
-13 59 3|*====
-12 190 92|======*=======
-11 425 481|=============================== *
-10 715 893|==================================================== *
-9 783 923|======================================================== *
-8 712 691|=================================================*=
-7 460 435|===============================*=
-6 275 250|=================*==
-5 184 137|=========*====
-4 100 73|=====*==
-3 50 38|==*=
-2 17 20|=*
-1 14 10|*
0 7 5|*
1 3 2|*
2 2 1|*
3 1 0|=
4 1 0|=
> 5 42 -|===


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 199.9670
P(chi-square) = 3.313e-36

Total sequences searched: 4065

Whole sequence top hits:
tophits_s report:
Total hits: 35
Satisfying E cutoff: 35
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 35
Satisfying E cutoff: 35
Total memory: 35K


Acknowledgements:

This research is funded by:

Developed by: