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Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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1 accessions found for Parabacteroides distasonis ATCC 8503  

Data for CP000140  

Available Atlases
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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP000140.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP000140_1120 CDS_1332969-1331071 96.8 4e-27 1
CP000140_1938 CDS_2362642-2364558 91.5 1.3e-25 1
CP000140_2497 CDS_3045048-3047357 91.2 1.6e-25 1
CP000140_1499 CDS_1804615-1803047 91.0 1.8e-25 1
CP000140_1328 CDS_1584029-1583127 90.5 2.5e-25 1
CP000140_3225 CDS_4012092-4015217 90.5 2.5e-25 1
CP000140_0653 CDS_801438-803753 90.3 2.9e-25 1
CP000140_2540 CDS_3094158-3092014 90.3 2.9e-25 1
CP000140_1411 CDS_1689747-1687462 89.4 5e-25 1
CP000140_0781 CDS_952709-950640 88.1 1.2e-24 1
CP000140_3115 CDS_3878578-3881715 88.0 1.3e-24 1
CP000140_1334 CDS_1592037-1590511 87.8 1.4e-24 1
CP000140_1574 CDS_1892261-1894801 87.5 1.8e-24 1
CP000140_1939 CDS_2364652-2366958 86.2 4e-24 1
CP000140_3387 CDS_4259136-4256488 82.6 4.3e-23 1
CP000140_0618 CDS_755052-757538 80.6 1.6e-22 2
CP000140_2541 CDS_3095507-3094155 80.6 1.6e-22 2
CP000140_1188 CDS_1415070-1416152 78.0 9e-22 1
CP000140_3687 CDS_4627121-4629091 77.3 1.4e-21 1
CP000140_2194 CDS_2649304-2650779 76.7 2e-21 1
CP000140_1683 CDS_2050550-2049297 76.7 2.1e-21 1
CP000140_1003 CDS_1197674-1198768 76.0 3.2e-21 1
CP000140_3012 CDS_3718379-3722488 75.1 5.7e-21 1
CP000140_0115 CDS_124317-126032 73.3 1.8e-20 1
CP000140_2659 CDS_3260874-3258046 70.5 1.2e-19 1
CP000140_0740 CDS_895957-893576 69.2 2.7e-19 1
CP000140_0490 CDS_600863-603244 69.1 2.9e-19 1
CP000140_2828 CDS_3484001-3486088 69.0 3.2e-19 1
CP000140_0782 CDS_954559-952790 66.7 1.4e-18 1
CP000140_0095 CDS_104934-106802 65.7 2.7e-18 1
CP000140_1359 CDS_1622876-1621008 65.5 3e-18 1
CP000140_3820 CDS_4771238-4772956 64.5 5.7e-18 1
CP000140_0602 CDS_734885-732510 63.8 9.4e-18 1
CP000140_1026 CDS_1223349-1224524 62.9 1.6e-17 1
CP000140_0964 CDS_1155143-1157080 62.2 2.6e-17 1
CP000140_2404 CDS_2922242-2923801 59.0 2.1e-16 1
CP000140_1445 CDS_1733793-1731058 57.6 5.2e-16 1
CP000140_3381 CDS_4245910-4250019 53.7 6.9e-15 1
CP000140_3280 CDS_4089100-4091763 48.4 2.2e-13 1
CP000140_2668 CDS_3274430-3278371 48.3 2.2e-13 1
CP000140_0739 CDS_893375-891972 45.5 1.4e-12 1
CP000140_1871 CDS_2289653-2290924 39.8 5.8e-11 1
CP000140_3298 CDS_4124443-4120403 28.8 7.5e-08 1
CP000140_1767 CDS_2174651-2175259 27.6 1.7e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP000140_1120 1/1 400 465 .. 1 87 [] 96.8 4e-27
CP000140_1938 1/1 420 486 .. 1 87 [] 91.5 1.3e-25
CP000140_2497 1/1 549 614 .. 1 87 [] 91.2 1.6e-25
CP000140_1499 1/1 295 362 .. 1 87 [] 91.0 1.8e-25
CP000140_1328 1/1 62 127 .. 1 87 [] 90.5 2.5e-25
CP000140_3225 1/1 680 745 .. 1 87 [] 90.5 2.5e-25
CP000140_0653 1/1 542 609 .. 1 87 [] 90.3 2.9e-25
CP000140_2540 1/1 483 549 .. 1 87 [] 90.3 2.9e-25
CP000140_1411 1/1 538 605 .. 1 87 [] 89.4 5e-25
CP000140_0781 1/1 464 530 .. 1 87 [] 88.1 1.2e-24
CP000140_3115 1/1 682 747 .. 1 87 [] 88.0 1.3e-24
CP000140_1334 1/1 287 352 .. 1 87 [] 87.8 1.4e-24
CP000140_1574 1/1 489 554 .. 1 87 [] 87.5 1.8e-24
CP000140_1939 1/1 543 610 .. 1 87 [] 86.2 4e-24
CP000140_3387 1/1 527 592 .. 1 87 [] 82.6 4.3e-23
CP000140_2541 2/2 225 291 .. 1 87 [] 80.1 2.2e-22
CP000140_0618 2/2 336 401 .. 1 87 [] 79.1 4.2e-22
CP000140_1188 1/1 143 208 .. 1 87 [] 78.0 9e-22
CP000140_3687 1/1 442 507 .. 1 87 [] 77.3 1.4e-21
CP000140_2194 1/1 269 334 .. 1 87 [] 76.7 2e-21
CP000140_1683 1/1 193 260 .. 1 87 [] 76.7 2.1e-21
CP000140_1003 1/1 142 207 .. 1 87 [] 76.0 3.2e-21
CP000140_3012 1/1 853 918 .. 1 87 [] 75.1 5.7e-21
CP000140_0115 1/1 350 418 .. 1 87 [] 73.3 1.8e-20
CP000140_2659 1/1 555 621 .. 1 87 [] 70.5 1.2e-19
CP000140_0740 1/1 280 346 .. 1 87 [] 69.2 2.7e-19
CP000140_0490 1/1 282 348 .. 1 87 [] 69.1 2.9e-19
CP000140_2828 1/1 465 531 .. 1 87 [] 69.0 3.2e-19
CP000140_0782 1/1 364 431 .. 1 87 [] 66.7 1.4e-18
CP000140_0095 1/1 398 463 .. 1 87 [] 65.7 2.7e-18
CP000140_1359 1/1 404 469 .. 1 87 [] 65.5 3e-18
CP000140_3820 1/1 351 419 .. 1 87 [] 64.5 5.7e-18
CP000140_0602 1/1 284 350 .. 1 87 [] 63.8 9.4e-18
CP000140_1026 1/1 187 253 .. 1 87 [] 62.9 1.6e-17
CP000140_0964 1/1 440 506 .. 1 87 [] 62.2 2.6e-17
CP000140_2404 1/1 289 357 .. 1 87 [] 59.0 2.1e-16
CP000140_1445 1/1 400 465 .. 1 87 [] 57.6 5.2e-16
CP000140_3381 1/1 838 906 .. 1 87 [] 53.7 6.9e-15
CP000140_3280 1/1 382 447 .. 1 87 [] 48.4 2.2e-13
CP000140_2668 1/1 809 875 .. 1 87 [] 48.3 2.2e-13
CP000140_0739 1/1 246 308 .. 1 82 [. 45.5 1.4e-12
CP000140_1871 1/1 214 280 .. 1 87 [] 39.8 5.8e-11
CP000140_3298 1/1 824 892 .. 1 87 [] 28.8 7.5e-08
CP000140_1767 1/1 6 42 .. 40 87 .] 27.6 1.7e-07

Alignments of top-scoring domains:
CP000140_1120: domain 1 of 1, from 400 to 465: score 96.8, E = 4e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks flan+sHE+RTPL+aI g+++lL e t+ +ee
CP000140_1 400 LKSAFLANMSHEIRTPLNAIVGFSQLLAE---------TDDPEER-- 435

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e++e+i++ + ll+Li+d+Ldl++ie+g
CP000140_1 436 ----------HEFVEIIDSNNRMLLQLISDILDLAKIESG 465

CP000140_1938: domain 1 of 1, from 420 to 486: score 91.5, E = 1.3e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks flan+sHE+RTPL+aI+g+++l+ e +l++e++
CP000140_1 420 MKSVFLANMSHEIRTPLNAIIGFSSLIAE---------LDLTAEEK- 456

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y ++i e ll+L+nd+Ldl+rie+g
CP000140_1 457 ----------EQYANIITTNNELLLKLVNDILDLARIESG 486

CP000140_2497: domain 1 of 1, from 549 to 614: score 91.2, E = 1.6e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks flan+sHE+RTPL+aI g++ lL e t see+
CP000140_2 549 LKSAFLANMSHEIRTPLNAIVGFSNLLAE---------TCHSEET-- 584

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+ e+i+ e ll+L+nd+Ldls+ieag
CP000140_2 585 ----------REFCEIIETNNELLLQLVNDILDLSKIEAG 614

CP000140_1499: domain 1 of 1, from 295 to 362: score 91.0, E = 1.8e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks flan+sHE+RTPL+aI g+a +L e e ee+r
CP000140_1 295 LKSMFLANMSHEIRTPLNAIVGFANILAE--------TKEIEEEER- 332

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ y+++i++ +e ll+Li+d+Ld+s+ieag
CP000140_1 333 ----------EFYVDIIDKNSELLLQLIEDILDFSKIEAG 362

CP000140_1328: domain 1 of 1, from 62 to 127: score 90.5, E = 2.5e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+ f+an+sHE+RTPL+aI g+a+l e t+ +eq
CP000140_1 62 MKNAFIANMSHEIRTPLNAIVGFAHLVTE---------TTNASEQ-- 97

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
rey+++i + + ll+Lind+Ldls+ie+g
CP000140_1 98 ----------REYFSIINKNCDLLLKLINDILDLSKIESG 127

CP000140_3225: domain 1 of 1, from 680 to 745: score 90.5, E = 2.5e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks flan+sHE+RTPL+aI g++ +L e t+ ee+
CP000140_3 680 LKSAFLANMSHEIRTPLNAIVGFSNILAE---------TDVLEEK-- 715

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ey e+i++ ll+Lind+Ldls+ieag
CP000140_3 716 ----------QEYAEIIENNNALLLQLINDILDLSKIEAG 745

CP000140_0653: domain 1 of 1, from 542 to 609: score 90.3, E = 2.9e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k flan+sHE+RTPL+aI g+++lL d +l +e++
CP000140_0 542 MKLVFLANMSHEIRTPLNAIVGFSQLLNS--------DMPLEPEEK- 579

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+++ i + ++ ll+Lind+Ldlsrie+g
CP000140_0 580 ----------AEFIDLITKNSDLLLKLINDILDLSRIESG 609

CP000140_2540: domain 1 of 1, from 483 to 549: score 90.3, E = 2.9e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks flan+sHE RTPL+aI g++ lL e + +ee+r
CP000140_2 483 MKSAFLANMSHEVRTPLNAIVGFSGLLVE---------PSTDEEER- 519

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ey ++i++ ++ +l+L+nd+Ldlsr+e+g
CP000140_2 520 ----------KEYSSIIRNNTDLMLNLVNDVLDLSRMETG 549

CP000140_1411: domain 1 of 1, from 538 to 605: score 89.4, E = 5e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks flan+sHE+RTPL+aI g++ l+ ++ l +e+r
CP000140_1 538 MKSAFLANMSHEIRTPLNAIVGFSNLMNS--------EEVLEPEER- 575

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++ i ++ ll+Lind+Ldlsr+e+g
CP000140_1 576 ----------EQFVKLINTNSDLLLKLINDILDLSRMESG 605

CP000140_0781: domain 1 of 1, from 464 to 530: score 88.1, E = 1.2e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks f+an+sHE+RTPL+aI g++el+ + + s+ ++
CP000140_0 464 MKSTFIANISHEIRTPLNAIVGFSELISD---------ESISAGEK- 500

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e++++i + + ll+Lind+Ldlsr+e+g
CP000140_0 501 ----------KEFFSIINNNSYLLLNLINDILDLSRLESG 530

CP000140_3115: domain 1 of 1, from 682 to 747: score 88.0, E = 1.3e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks flan+sHE+RTPL+aI g++ +L t+ e++
CP000140_3 682 LKSAFLANMSHEIRTPLNAIVGFSNILAS---------TDDLEDK-- 717

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+ ++i++ ll+Lind+Ldls+ieag
CP000140_3 718 ----------KEFADIIENNNSLLLQLINDILDLSKIEAG 747

CP000140_1334: domain 1 of 1, from 287 to 352: score 87.8, E = 1.4e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks f+an+sHE+RTPL+aI g++ lL e ++ ee+
CP000140_1 287 MKSAFIANMSHEIRTPLNAIVGFSTLLAE---------SDDEEEK-- 322

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+eyl++i+++ e ll+Li d+Ld+s+ie+g
CP000140_1 323 ----------KEYLRIIESSNEFLLQLIGDILDISKIESG 352

CP000140_1574: domain 1 of 1, from 489 to 554: score 87.5, E = 1.8e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks flan+sHE+RTPL+aI g++ ++ e +e +r
CP000140_1 489 LKSAFLANMSHEIRTPLNAIVGFSNIIAE----------IDDEVER- 524

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ yl++i++ + ll+Li+d+Ld+s+ieag
CP000140_1 525 ----------QSYLDIIHKNNDLLLQLIDDILDFSKIEAG 554

CP000140_1939: domain 1 of 1, from 543 to 610: score 86.2, E = 4e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks flan+sHE+RTPL+aI g++elL d e s+ +r
CP000140_1 543 MKSAFLANMSHEIRTPLNAIVGFSELLTS--------DMEISPNER- 580

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ ++i + ++ ll+Lind+Ldlsri +g
CP000140_1 581 ----------DEFMQVISKNSDLLLKLINDILDLSRIKSG 610

CP000140_3387: domain 1 of 1, from 527 to 592: score 82.6, E = 4.3e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks flan+sHE+RTPL+aI g++ lL + + e++
CP000140_3 527 LKSAFLANMSHEIRTPLNAIVGFSGLLAV----------TENMEDK- 562

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ey+++i + + ll+Lind+Ldl++ieag
CP000140_3 563 ----------EEYINIINSNNDLLLQLINDILDLAKIEAG 592

CP000140_2541: domain 2 of 2, from 225 to 291: score 80.1, E = 2.2e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks f+an+sHE RTPL+aI g++elL +e see++
CP000140_2 225 KKSAFIANISHEVRTPLNAIVGFSELLAS---------SEYSEEEK- 261

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + +++e ll+L+nd+Ldlsr+e+g
CP000140_2 262 ----------IRFAGEVNHSSELLLNLVNDVLDLSRLESG 291

CP000140_0618: domain 2 of 2, from 336 to 401: score 79.1, E = 4.2e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++ ++sH++R PL++I+gy+elLl+ + +e q
CP000140_0 336 SREKLMLTISHDIRAPLSSIIGYIELLLR---------RHPDERQ-- 371

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ yle ++ +++++l+L+ndlLd+ r+e+g
CP000140_0 372 ----------QYYLENMKGSSDHILSLVNDLLDFQRLESG 401

CP000140_1188: domain 1 of 1, from 143 to 208: score 78.0, E = 9e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
s flan+sHE+RTPL+aI g++ l+ e +e ee
CP000140_1 143 LTSAFLANMSHEIRTPLNAIVGFSTLISE---------SEDKEEI-- 178

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+ ++i+ e ll+Lind+Ld+s+ieag
CP000140_1 179 ----------KEFAKIIHANNELLLNLINDILDMSKIEAG 208

CP000140_3687: domain 1 of 1, from 442 to 507: score 77.3, E = 1.4e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks flan+ HE+RTPL+aI g+++++ + e ++e+r
CP000140_3 442 LKSAFLANMNHEIRTPLNAIVGFSQVIAD----------EEDAETR- 477

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+ ++i++ e l+rLi+d+Ld+s+ie++
CP000140_3 478 ----------HELSNIIQSNNELLQRLIEDVLDISKIESN 507

CP000140_2194: domain 1 of 1, from 269 to 334: score 76.7, E = 2e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks flan+ HE+RTPL+aI g++++L e ++e r
CP000140_2 269 LKSTFLANMTHEIRTPLNAIVGFSDMLGL----------EDDPEMR- 304

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y++ i++ ll+Lind L++srie++
CP000140_2 305 ----------EQYISMIKENNTALLELINDTLEMSRIESN 334

CP000140_1683: domain 1 of 1, from 193 to 260: score 76.7, E = 2.1e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++flan+sHE+RTPL++I g++ lL + +l+e ++
CP000140_1 193 YEQKFLANMSHEIRTPLNSIVGFSNLLAS--------EKDLDEADK- 230

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + +ti ++ + ll Lind+L+ sr+++g
CP000140_1 231 ----------QLFAKTINQSCDLLLVLINDILEVSRLQSG 260

CP000140_1003: domain 1 of 1, from 142 to 207: score 76.0, E = 3.2e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks flan+sHE+R PL+aI g+++lL + +e +e
CP000140_1 142 LKSSFLANISHEIRMPLNAIVGFSSLLGD---------EEDGELR-- 177

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ey++ i+ e ll ++nd+Ldl+++e+g
CP000140_1 178 ----------QEYINLIQTNNELLLGIVNDVLDLAKLESG 207

CP000140_3012: domain 1 of 1, from 853 to 918: score 75.1, E = 5.7e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k +f+ n+sHE+RTPLt I++ +e L + te++ e
CP000140_3 853 MKLRFFTNVSHEFRTPLTLIMTPLEKLMK---------TEKDMES-- 888

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l+ i+r a+rll+L+n+lLd+ +i+ +
CP000140_3 889 ----------QQILKLIYRNADRLLKLVNQLLDFRKIDMQ 918

CP000140_0115: domain 1 of 1, from 350 to 418: score 73.3, E = 1.8e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ f++++sHEL+TP++aI++ ++lL++ a+ +++++eq
CP000140_0 350 AKTTFISTISHELKTPISAIMMSLKLLED------ARVGAMNDEQ-- 388

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + e+i+++++rll++ ++lL +++ eag
CP000140_0 389 ----------KALAESIKESSNRLLEITSELLKMTQVEAG 418

CP000140_2659: domain 1 of 1, from 555 to 621: score 70.5, E = 1.2e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aksefl+ +sHE+RTP+++I g++ ++ + +++
CP000140_2 555 AKSEFLSRMSHEIRTPMNGIVGMSTIAMQ---------NIDNTDKI- 591

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ le+++ ++++ll+Lind+Ld+s+ie+g
CP000140_2 592 ----------KDCLEKVIMSSKHLLALINDVLDMSKIESG 621

CP000140_0740: domain 1 of 1, from 280 to 346: score 69.2, E = 2.7e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla +sH++RTP++aI+g+a ++++ + +e +r
CP000140_0 280 AKSDFLARMSHDIRTPMNAIMGMATIAKA----------HVDERER- 315

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + e+i +++ ll+Lin++Ld+s+ie+g
CP000140_0 316 ---------ILDCMEKINGASKLLLSLINEVLDMSKIESG 346

CP000140_0490: domain 1 of 1, from 282 to 348: score 69.1, E = 2.9e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fl+ +sH++RTP++aI+g++ ++ + + + e +
CP000140_0 282 AKSDFLSRMSHDIRTPMNAIIGMTTIASM---------HIDDRERI- 318

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l++i +++ ll+Lin++Ld+s+ e+g
CP000140_0 319 ----------VDCLKKIMVSSKLLLNLINEVLDMSKVESG 348

CP000140_2828: domain 1 of 1, from 465 to 531: score 69.0, E = 3.2e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+ f++n+sHE+RTPL+aI g++el+ + ++ s +++
CP000140_2 465 MKTAFIRNMSHEIRTPLNAINGFSELITN---------DDISMDEK- 501

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + ++i++ +l +++n+lL+++++++g
CP000140_2 502 ----------QAFSRIIYENCYHLTSMLNNLLEIAQLDSG 531

CP000140_0782: domain 1 of 1, from 364 to 431: score 66.7, E = 1.4e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++++ n+sHEL+TP+++I+gy+e++l + ++ls+++r
CP000140_0 364 MKRQLTQNVSHELKTPVSSIQGYLETILSN--------PDLSPDKR- 401

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +le+ ++++ rl L++d+ l r+++
CP000140_0 402 ----------QFFLERCYSQSTRLTGLLRDISVLNRLDEA 431

CP000140_0095: domain 1 of 1, from 398 to 463: score 65.7, E = 2.7e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks flan+ HE+RTPL+aI g+++lL e + e r
CP000140_0 398 LKSTFLANMTHEIRTPLNAIVGFSDLLGV----------EEDLELR- 433

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ y++ i+ + ll+++nd+Ld+srie+
CP000140_0 434 ----------QNYISLIKMNNDLLLSIVNDVLDISRIESD 463

CP000140_1359: domain 1 of 1, from 404 to 469: score 65.5, E = 3e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks+ la++sHE+RTPL+aI g++el+ ++ +ee
CP000140_1 404 MKSKYLADMSHEIRTPLNAITGFSELMAF---------ADTDEER-- 439

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y ++i+ + l +Lind+Ld+s+iea
CP000140_1 440 ----------MSYYDVIKMNNQLLMQLINDILDISKIEAD 469

CP000140_3820: domain 1 of 1, from 351 to 419: score 64.5, E = 5.7e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ f++++sHEL+TP++aI++ +elL++ + ++l+ eq
CP000140_3 351 AKTTFISTISHELKTPISAIMMSLELLED------NRIGKLNTEQ-- 389

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + + i++ ++rll++ +lL +s+ e+g
CP000140_3 390 ----------ESLSKNIKENSDRLLEITGELLKMSQVESG 419

CP000140_0602: domain 1 of 1, from 284 to 350: score 63.8, E = 9.4e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak++fl+ +sH++RTP++aI g++ +++ +++++ r
CP000140_0 284 AKTDFLSRMSHDIRTPINAIVGMTAIARL----------HMDDQMR- 319

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ l++i +++ ll+Lin++Ld+s++e+
CP000140_0 320 ---------IADCLKKITISSKLLLNLINEVLDMSKLESD 350

CP000140_1026: domain 1 of 1, from 187 to 253: score 62.9, E = 1.6e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ f++n+sHEL++PLtaI+g +e+ l e+s+e+
CP000140_1 187 SEKAFISNASHELNNPLTAIQGECEISLL---------KERSPEE-- 222

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y+ +l++i e+ r+ +Li lL ls + +
CP000140_1 223 ---------YQAALRRIATETSRIIQLIKHLLFLSHGDKE 253

CP000140_0964: domain 1 of 1, from 440 to 506: score 62.2, E = 2.6e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ f+ n+ HE+RTPLt+I+g +e L++ + +ee++
CP000140_0 440 VRANFFTNVTHEFRTPLTVILGVSEELRK---------GGIGEEEL- 476

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l+ i r+++ ll+L+n+lL+ ++ +++
CP000140_0 477 ----------KTGLNMIGRQGKNLLELVNQLLEVAKVRSE 506

CP000140_2404: domain 1 of 1, from 289 to 357: score 59.0, E = 2.1e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++f+ n+ HEL+TP+++I+++a++L++ +d ++s++
CP000140_2 289 MKNDFINNMTHELKTPVSTISLAAQMLKD-------SDITKSPDV-- 326

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + +i +e++rl+ L++ +L++s e +
CP000140_2 327 ---------FKHISGVINDETKRLSFLVEKVLQMSLFERQ 357

CP000140_1445: domain 1 of 1, from 400 to 465: score 57.6, E = 5.2e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k +f+ n+sHE++TPLt I+g + + ++++
CP000140_1 400 QKLQFFTNVSHEIKTPLTLILGPLNKMAQ----------DAPAGA-- 434

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ ++++++ aerl r i++lLd+ +ie++
CP000140_1 435 ---------FADDIRIVKKNAERLKRVIDQLLDFRKIENN 465

CP000140_3381: domain 1 of 1, from 838 to 906: score 53.7, E = 6.9e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f+ n+sHELRTPLt I+g++e L++ ++ +e s +
CP000140_3 838 LKTRFFMNVSHELRTPLTIIKGLTEDLER------HSGSEVSCGD-- 876

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+l+ti r ++rl +n+lLdls + g
CP000140_3 877 ----------KEILRTISRNTNRLIWHVNELLDLSVLTRG 906

CP000140_3280: domain 1 of 1, from 382 to 447: score 48.4, E = 2.2e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k +f+ n+sHE RTPLt I++ ++ L + + ++
CP000140_3 382 QKLQFFTNVSHEVRTPLTLILAPLDRLII---------SLRESPY-- 417

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l i++ a+rllr in++Ld+ + e
CP000140_3 418 ----------ASDLGLIQKNANRLLRVINQILDFRKVEGK 447

CP000140_2668: domain 1 of 1, from 809 to 875: score 48.3, E = 2.2e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak +f+ n++HE+RTPLt I+ +e + d +ls+
CP000140_2 809 AKIDFFINIAHEIRTPLTLIKSPLEKVTR--------DIKLSPSA-- 845

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ yl ++++ a+rll+L+n+lLd+ + e +
CP000140_2 846 ----------KNYLTIVDKNANRLLDLVNQLLDFRKTEIE 875

CP000140_0739: domain 1 of 1, from 246 to 308: score 45.5, E = 1.4e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f+ n+ HEL+TP+++ +++++Ll+++ ++ +e+q
CP000140_0 246 LKTDFTNNMTHELKTPISVSYAAVDALLNFS-------DPVNEKQ-- 283

peLRledpeyreyletilreaerllrLindlLdls<-*
++yl ++++++ +l L++++L+l+
CP000140_0 284 ----------KKYLTIVKDQLIHLTGLVEQILTLA 308

CP000140_1871: domain 1 of 1, from 214 to 280: score 39.8, E = 5.8e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ f+ n++HEL TPL++ + +elL e ++++e+q
CP000140_1 214 KQRHFVENAAHELQTPLAVCMNKLELLSE--------HPDCTEDQ-- 250

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + ++++++ + rL lL lsri++
CP000140_1 251 ----------LKEIAGLHQALNGIIRLNKSLLLLSRIDNK 280

CP000140_3298: domain 1 of 1, from 824 to 892: score 28.8, E = 7.5e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k f+ ++ HEL TPLt I g +++++ ++ ++++
CP000140_3 824 SKLNFFTHITHELCTPLTLINGVENYIQAYA-------ATSKDKTL- 862

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y++++++ +e l+ Li+++Ld+ ++e
CP000140_3 863 ----------EKYTSVLRENVEELNGLIQEILDFRKAEDA 892

CP000140_1767: domain 1 of 1, from 6 to 42: score 27.6, E = 1.7e-07
*->elseeqrlpeLRledpeyreyletilreaerllrLindlLdlsriea
els +r + ++e i ++ ll+Lind+Ldlsrie+
CP000140_1 6 ELSKAER-----------ENFTELINTNSDLLLNLINDILDLSRIES 41

g<-*
g
CP000140_1 42 G 42


Histogram of all scores:
score obs exp (one = represents 13 sequences)
----- --- ---
-14 1 0|=
-13 45 2|*===
-12 156 87|======*=====
-11 410 456|================================ *
-10 660 846|=================================================== *
-9 756 874|==========================================================*
-8 672 654|==================================================*=
-7 471 412|===============================*=====
-6 274 237|==================*===
-5 161 130|=========*===
-4 89 69|=====*=
-3 38 36|==*
-2 35 19|=*=
-1 12 10|*
0 9 5|*
1 4 2|*
2 4 1|*
3 1 0|=
4 1 0|=
5 0 0|
6 0 0|
> 7 51 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 157.1889
P(chi-square) = 1.962e-27

Total sequences searched: 3850

Whole sequence top hits:
tophits_s report:
Total hits: 44
Satisfying E cutoff: 44
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 44
Satisfying E cutoff: 44
Total memory: 38K


Acknowledgements:

This research is funded by:

Developed by: