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Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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264 projects found  

1 accessions found for Hahella chejuensis KCTC 2396  

Data for CP000155  

Available Atlases
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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP000155.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP000155_1722 CDS_1828514-1825641 103.7 7.8e-29 1
CP000155_3466 CDS_3786550-3789078 103.4 1e-28 1
CP000155_6027 CDS_6434204-6436876 101.4 3.6e-28 1
CP000155_3725 CDS_4066913-4068892 97.6 4.2e-27 1
CP000155_0766 CDS_787679-791992 96.2 1.1e-26 1
CP000155_6409 CDS_6817611-6819410 95.6 1.6e-26 1
CP000155_0298 CDS_328955-331636 92.3 1.3e-25 1
CP000155_0830 CDS_858710-861214 92.0 1.6e-25 1
CP000155_5040 CDS_5429594-5427318 91.7 2e-25 1
CP000155_0744 CDS_766123-764795 87.8 2.5e-24 1
CP000155_0780 CDS_809123-805332 86.2 7.1e-24 1
CP000155_4054 CDS_4411296-4408918 85.6 1.1e-23 1
CP000155_3530 CDS_3859344-3860600 85.5 1.2e-23 1
CP000155_0912 CDS_939788-941968 84.9 1.7e-23 1
CP000155_4447 CDS_4795397-4798204 84.3 2.4e-23 1
CP000155_4028 CDS_4381935-4384559 83.2 5.1e-23 1
CP000155_4702 CDS_5062279-5064237 81.9 1.2e-22 1
CP000155_0934 CDS_965258-962766 81.9 1.2e-22 1
CP000155_2206 CDS_2368968-2366575 81.8 1.3e-22 1
CP000155_3518 CDS_3845375-3847765 80.0 4.3e-22 1
CP000155_5200 CDS_5587561-5590113 78.1 1.5e-21 1
CP000155_2084 CDS_2231059-2233776 76.0 5.5e-21 1
CP000155_4011 CDS_4360869-4362170 75.6 7.2e-21 1
CP000155_3409 CDS_3726842-3729178 71.7 9.6e-20 1
CP000155_5655 CDS_6053884-6055491 69.8 3.2e-19 1
CP000155_6334 CDS_6739320-6740708 69.0 5.3e-19 1
CP000155_0294 CDS_328278-326278 67.1 1.9e-18 1
CP000155_3432 CDS_3750549-3749134 66.6 2.6e-18 1
CP000155_2434 CDS_2617767-2619350 65.3 5.9e-18 1
CP000155_1680 CDS_1780318-1781886 60.5 1.4e-16 1
CP000155_6373 CDS_6776658-6778097 60.3 1.6e-16 1
CP000155_0064 CDS_68882-67500 60.2 1.7e-16 1
CP000155_4835 CDS_5225080-5228589 59.5 2.7e-16 1
CP000155_5773 CDS_6190631-6189027 59.2 3.2e-16 1
CP000155_4849 CDS_5247412-5245634 58.3 5.8e-16 1
CP000155_2438 CDS_2622516-2623982 57.5 9.9e-16 1
CP000155_1575 CDS_1657266-1659065 56.4 2.1e-15 1
CP000155_4954 CDS_5342888-5341557 55.5 3.6e-15 1
CP000155_0993 CDS_1036346-1035267 54.7 6.1e-15 1
CP000155_1367 CDS_1433579-1432050 54.1 9.2e-15 1
CP000155_3909 CDS_4261353-4260034 53.1 1.7e-14 1
CP000155_0560 CDS_590357-591811 52.9 2e-14 1
CP000155_3919 CDS_4271042-4269741 52.5 2.6e-14 1
CP000155_1373 CDS_1438252-1436948 51.8 4e-14 1
CP000155_5290 CDS_5679761-5677359 51.5 4.9e-14 1
CP000155_4025 CDS_4375157-4377196 50.6 8.8e-14 1
CP000155_6616 CDS_7029284-7030681 50.5 9.6e-14 1
CP000155_0202 CDS_220433-218907 48.7 3.1e-13 1
CP000155_4140 CDS_4499228-4501189 46.8 1.1e-12 1
CP000155_0314 CDS_343235-345202 46.1 1.7e-12 1
CP000155_4700 CDS_5060234-5061736 45.3 2.7e-12 1
CP000155_1763 CDS_1877547-1876129 43.1 1.2e-11 1
CP000155_4699 CDS_5060020-5060241 41.8 2.9e-11 1
CP000155_4974 CDS_5365437-5363815 41.0 4.6e-11 1
CP000155_5987 CDS_6395130-6398096 40.3 7.5e-11 1
CP000155_1569 CDS_1646752-1645205 37.1 6.1e-10 1
CP000155_0891 CDS_919260-921356 36.0 1.2e-09 1
CP000155_0671 CDS_690919-692655 31.8 1.9e-08 1
CP000155_5813 CDS_6227150-6225669 30.1 5.6e-08 1
CP000155_3820 CDS_4167303-4165534 28.3 1.8e-07 2
CP000155_4120 CDS_4483835-4482543 27.7 2.7e-07 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP000155_1722 1/1 292 357 .. 1 87 [] 103.7 7.8e-29
CP000155_3466 1/1 452 517 .. 1 87 [] 103.4 1e-28
CP000155_6027 1/1 379 445 .. 1 87 [] 101.4 3.6e-28
CP000155_3725 1/1 267 332 .. 1 87 [] 97.6 4.2e-27
CP000155_0766 1/1 787 852 .. 1 87 [] 96.2 1.1e-26
CP000155_6409 1/1 222 289 .. 1 87 [] 95.6 1.6e-26
CP000155_0298 1/1 394 459 .. 1 87 [] 92.3 1.3e-25
CP000155_0830 1/1 221 286 .. 1 87 [] 92.0 1.6e-25
CP000155_5040 1/1 235 300 .. 1 87 [] 91.7 2e-25
CP000155_0744 1/1 203 270 .. 1 87 [] 87.8 2.5e-24
CP000155_0780 1/1 579 644 .. 1 87 [] 86.2 7.1e-24
CP000155_4054 1/1 278 348 .. 1 87 [] 85.6 1.1e-23
CP000155_3530 1/1 180 248 .. 1 87 [] 85.5 1.2e-23
CP000155_0912 1/1 501 567 .. 1 87 [] 84.9 1.7e-23
CP000155_4447 1/1 684 752 .. 1 87 [] 84.3 2.4e-23
CP000155_4028 1/1 634 702 .. 1 87 [] 83.2 5.1e-23
CP000155_4702 1/1 152 217 .. 1 87 [] 81.9 1.2e-22
CP000155_0934 1/1 186 251 .. 1 87 [] 81.9 1.2e-22
CP000155_2206 1/1 291 356 .. 1 87 [] 81.8 1.3e-22
CP000155_3518 1/1 77 142 .. 1 87 [] 80.0 4.3e-22
CP000155_5200 1/1 440 507 .. 1 87 [] 78.1 1.5e-21
CP000155_2084 1/1 678 746 .. 1 87 [] 76.0 5.5e-21
CP000155_4011 1/1 203 271 .. 1 87 [] 75.6 7.2e-21
CP000155_3409 1/1 270 338 .. 1 87 [] 71.7 9.6e-20
CP000155_5655 1/1 314 380 .. 1 87 [] 69.8 3.2e-19
CP000155_6334 1/1 248 313 .. 1 87 [] 69.0 5.3e-19
CP000155_0294 1/1 301 366 .. 1 87 [] 67.1 1.9e-18
CP000155_3432 1/1 251 317 .. 1 87 [] 66.6 2.6e-18
CP000155_2434 1/1 285 353 .. 1 87 [] 65.3 5.9e-18
CP000155_1680 1/1 297 362 .. 1 87 [] 60.5 1.4e-16
CP000155_6373 1/1 252 320 .. 1 87 [] 60.3 1.6e-16
CP000155_0064 1/1 237 301 .. 1 87 [] 60.2 1.7e-16
CP000155_4835 1/1 808 874 .. 1 87 [] 59.5 2.7e-16
CP000155_5773 1/1 308 374 .. 1 87 [] 59.2 3.2e-16
CP000155_4849 1/1 222 288 .. 1 87 [] 58.3 5.8e-16
CP000155_2438 1/1 258 326 .. 1 87 [] 57.5 9.9e-16
CP000155_1575 1/1 239 304 .. 1 87 [] 56.4 2.1e-15
CP000155_4954 1/1 223 289 .. 1 87 [] 55.5 3.6e-15
CP000155_0993 1/1 131 188 .. 1 79 [. 54.7 6.1e-15
CP000155_1367 1/1 281 349 .. 1 87 [] 54.1 9.2e-15
CP000155_3909 1/1 209 274 .. 1 87 [] 53.1 1.7e-14
CP000155_0560 1/1 245 310 .. 1 87 [] 52.9 2e-14
CP000155_3919 1/1 230 295 .. 1 87 [] 52.5 2.6e-14
CP000155_1373 1/1 222 280 .. 1 87 [] 51.8 4e-14
CP000155_5290 1/1 438 503 .. 1 87 [] 51.5 4.9e-14
CP000155_4025 1/1 458 526 .. 1 87 [] 50.6 8.8e-14
CP000155_6616 1/1 237 307 .. 1 87 [] 50.5 9.6e-14
CP000155_0202 1/1 268 336 .. 1 87 [] 48.7 3.1e-13
CP000155_4140 1/1 435 500 .. 1 87 [] 46.8 1.1e-12
CP000155_0314 1/1 413 481 .. 1 87 [] 46.1 1.7e-12
CP000155_4700 1/1 257 325 .. 1 87 [] 45.3 2.7e-12
CP000155_1763 1/1 254 320 .. 1 87 [] 43.1 1.2e-11
CP000155_4699 1/1 7 71 .. 6 87 .] 41.8 2.9e-11
CP000155_4974 1/1 304 374 .. 1 87 [] 41.0 4.6e-11
CP000155_5987 1/1 753 818 .. 1 87 [] 40.3 7.5e-11
CP000155_1569 1/1 292 357 .. 1 87 [] 37.1 6.1e-10
CP000155_0891 1/1 476 534 .. 1 87 [] 36.0 1.2e-09
CP000155_0671 1/1 369 421 .. 1 82 [. 31.8 1.9e-08
CP000155_5813 1/1 284 325 .. 1 66 [. 30.1 5.6e-08
CP000155_4120 1/1 233 297 .. 1 87 [] 27.7 2.7e-07

Alignments of top-scoring domains:
CP000155_1722: domain 1 of 1, from 292 to 357: score 103.7, E = 7.8e-29
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan+sHE+RTPL++I+g+++lLl+ ++l+++q
CP000155_1 292 VKSEFLANMSHEIRTPLNGIIGFTHLLLK---------SNLGPQQ-- 327

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l+til+++e ll +ind+Ld+s+ieag
CP000155_1 328 ----------RDQLNTILKSSEILLTIINDILDFSKIEAG 357

CP000155_3466: domain 1 of 1, from 452 to 517: score 103.4, E = 1e-28
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aksefla +sHE+RTP+++++g+a++L + t+lse+q
CP000155_3 452 AKSEFLARMSHEIRTPMNGVLGMASILAD---------TPLSEKQ-- 487

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+yl+ti +++e+ll++ind+Ld+s+ieag
CP000155_3 488 ----------RKYLDTIVSSGESLLNIINDILDFSKIEAG 517

CP000155_6027: domain 1 of 1, from 379 to 445: score 101.4, E = 3.6e-28
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+flan+sHE+RTP+taI+gy+e L+e ++ls e+r
CP000155_6 379 AKSRFLANMSHEIRTPMTAILGYSESLRE---------SNLSREER- 415

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++i r++++ll +ind+Ldls+iea+
CP000155_6 416 ----------NQFIDIIVRSGRHLLTIINDILDLSKIEAE 445

CP000155_3725: domain 1 of 1, from 267 to 332: score 97.6, E = 4.2e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aksefla +sHELRTP+++++g+++lL+e t ++eeq
CP000155_3 267 AKSEFLAIMSHELRTPMNGVLGMLQLLQE---------TQQDEEQ-- 302

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ey++++ r++e+l ++i+d+Ld+s+ie g
CP000155_3 303 ----------KEYTHVAMRSTEHLIAIIDDILDFSKIERG 332

CP000155_0766: domain 1 of 1, from 787 to 852: score 96.2, E = 1.1e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHE+RTP++aI+g++ lL++ t+l e q
CP000155_0 787 AKSEFLANMSHEIRTPMNAILGMVNLLKR---------TNLEERQ-- 822

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y+++++++a+ ll ++nd+Ld+s+ieag
CP000155_0 823 ----------QDYVHKAESSARALLGILNDILDFSKIEAG 852

CP000155_6409: domain 1 of 1, from 222 to 289: score 95.6, E = 1.6e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fl+n+sHELRTPL+a++g+a+l+++e+ +ls eq
CP000155_6 222 AKSRFLSNMSHELRTPLNAVMGFAQLMQMES-------RNLSREQ-- 259

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++ i++++e+ll+Lind++dls+ie+g
CP000155_6 260 ----------MQNIDEIYKASEHLLSLINDIMDLSKIESG 289

CP000155_0298: domain 1 of 1, from 394 to 459: score 92.3, E = 1.3e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHE+RTP++a++gy+elL+ +++q
CP000155_0 394 AKSEFLANMSHEIRTPMNAVIGYTELLEG---------LIHDAKQ-- 429

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ yl+ i++ ++ ll +ind+Ldls+ e+g
CP000155_0 430 ----------KSYLDAIKKGSRALLTIINDILDLSKVESG 459

CP000155_0830: domain 1 of 1, from 221 to 286: score 92.0, E = 1.6e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks f+an+sHE+RTP++aI+g++ l+++ t+l++ q
CP000155_0 221 AKSFFVANVSHEIRTPMNAILGMCYLMQR---------TDLDARQ-- 256

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l++i +a++ll+Lind+Ld+s+ieag
CP000155_0 257 ----------TDFLNRINVAAKSLLALINDILDFSKIEAG 286

CP000155_5040: domain 1 of 1, from 235 to 300: score 91.7, E = 2e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks f+an+sHELRTP++ I+gy+ lLl+ t+ s eq
CP000155_5 235 SKSVFIANISHELRTPMNNILGYTGLLLD---------TPVSQEQ-- 270

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
reyl +++++e+ll L nd+Ldls++eag
CP000155_5 271 ----------REYLLAVQQSSESLLTLFNDMLDLSKLEAG 300

CP000155_0744: domain 1 of 1, from 203 to 270: score 87.8, E = 2.5e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f++n+sHELRTPLt+I+gy+e+L +++ +el++
CP000155_0 203 MRRDFVSNVSHELRTPLTVISGYLETLIDNA-------DELPPRW-- 240

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + ++++a+r+++L+ndlL lsrie+
CP000155_0 241 ----------NRAMNQMQQQAQRMEALVNDLLLLSRIEND 270

CP000155_0780: domain 1 of 1, from 579 to 644: score 86.2, E = 7.1e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sHE+RTP+++++g++ l l ++l++eq
CP000155_0 579 AKSDFLATMSHEIRTPMNGVLGMLNLVLQ---------SKLDSEQ-- 614

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++++++ae+ll+Lind+Ld+s+ +ag
CP000155_0 615 ----------LRKVKIAKSSAESLLSLINDILDFSKVDAG 644

CP000155_4054: domain 1 of 1, from 278 to 348: score 85.6, E = 1.1e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+flan+sHELRTPL+aI+gy+e+L+e + +e + e
CP000155_4 278 AKSRFLANMSHELRTPLNAIIGYSEMLQEVV-------AEDDYER-- 315

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e+ + + ++++++++ll+Lind+Ld+s+ieag
CP000155_4 316 -------EEILDDIGKVRSAGKHLLSLINDILDISKIEAG 348

CP000155_3530: domain 1 of 1, from 180 to 248: score 85.5, E = 1.2e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k fl+++sHELRTPL+aI+gy+e+Ll+++ +el+++q
CP000155_3 180 YKINFLSSMSHELRTPLNAILGYSEVLLDGMM------GELNPKQ-- 218

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
ey + i++++ +ll +indlLdls+ieag
CP000155_3 219 ----------LEYCKEIYDSGSYLLIIINDLLDLSKIEAG 248

CP000155_0912: domain 1 of 1, from 501 to 567: score 84.9, E = 1.7e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f++++sHEL+TPLt+Ir+y e+L+e + +ee++
CP000155_0 501 QQQDFVSAVSHELKTPLTSIRMYGEMLRE---------GWVGEEKK- 537

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
rey + i++e+erl+rLi ++L+l+r+e +
CP000155_0 538 ----------REYYDFIHDESERLSRLIANVLQLARMERN 567

CP000155_4447: domain 1 of 1, from 684 to 752: score 84.3, E = 2.4e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ef++++sHELRTPLtaI g + lL g+ l ++q+
CP000155_4 684 LKNEFISTVSHELRTPLTAINGSLALLDS-------GRLGLLPDQA- 722

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l+++++ erllrLindlLd+ +ie+g
CP000155_4 723 ----------KQMLHIAYSNCERLLRLINDLLDIQKIESG 752

CP000155_4028: domain 1 of 1, from 634 to 702: score 83.2, E = 5.1e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+ef++++sHELRTPLt+I g+++lLl+++ ++ e+
CP000155_4 634 MKNEFISTVSHELRTPLTSITGALSLLLNGA-------VGQPTEE-- 671

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++l+++++ ++rl LindlLd+++i ag
CP000155_4 672 ---------FSRFLQIAYKNSQRLALLINDLLDMEKITAG 702

CP000155_4702: domain 1 of 1, from 152 to 217: score 81.9, E = 1.2e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ksefla+lsHELRTPLtaI+gy+elL + s +++
CP000155_4 152 SKSEFLAHLSHELRTPLTAILGYTELLIA----------QNSIPDN- 187

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l++++r +++ll+L+nd+Ld+s+ieag
CP000155_4 188 ----------LSHLQIVQRNGQHLLSLLNDILDISKIEAG 217

CP000155_0934: domain 1 of 1, from 186 to 251: score 81.9, E = 1.2e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks fla++sHE+RTP+++I+g++elL + ls+eq
CP000155_0 186 AKSLFLATMSHEIRTPMNGILGMLELLSH---------SQLSAEQ-- 221

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++t++++a +ll+++nd+Ld+s+ieag
CP000155_0 222 ----------TKMISTVRDSAFSLLNILNDILDFSKIEAG 251

CP000155_2206: domain 1 of 1, from 291 to 356: score 81.8, E = 1.3e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+ +flan+sHE+RTP ++++g+++l le ++lse+q
CP000155_2 291 ARADFLANMSHEIRTPFNGVLGMISLTLE---------EPLSEKQ-- 326

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e l+++++++ ll+L+nd+Ld+s+ eag
CP000155_2 327 ----------KEQLNVAYSSGVALLELLNDILDISKVEAG 356

CP000155_3518: domain 1 of 1, from 77 to 142: score 80.0, E = 4.3e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks f+an+sHE+RTPL++++g+++++ ++ls eq
CP000155_3 77 AKSLFIANMSHEIRTPLNGVIGMLQAMMQ---------GDLSREQ-- 112

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +t+l +++ ll indlLd+s++ea
CP000155_3 113 ----------KARAKTALTSGKLLLTVINDLLDFSKLEAD 142

CP000155_5200: domain 1 of 1, from 440 to 507: score 78.1, E = 1.5e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+flan+sHELRTP++aI+g+++l+l+ ++ ++++
CP000155_5 440 VKSQFLANMSHELRTPVHAILGFTSLCLK---------RVKNVDELA 477

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e l+ ++ +ae ll+L+n+lLdl+++e+g
CP000155_5 478 ----------YEHLSEVKTSAEGLLDLLNNLLDLAKLESG 507

CP000155_2084: domain 1 of 1, from 678 to 746: score 76.0, E = 5.5e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ef++++sHELRTPLtaI g + lL +++ +++++q
CP000155_2 678 IKDEFISTISHELRTPLTAINGSLALLDAKVA------MAAPDKQ-- 716

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++ +++r ++rll+L+n +Ldl ++ +g
CP000155_2 717 ----------AQMIGIARRNTDRLLNLVNAILDLKKMASG 746

CP000155_4011: domain 1 of 1, from 203 to 271: score 75.6, E = 7.2e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++e++a +sHELRTPLtaI+g + lL+ g+ + +++q+
CP000155_4 203 IRREWVAVVSHELRTPLTAIQGSLGLLQS-------GRFDHNPDQK- 241

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +l+ + + + rl +L+n++Ld++rie+g
CP000155_4 242 ----------AHMLQMACNNTVRLVKLVNEVLDIERIESG 271

CP000155_3409: domain 1 of 1, from 270 to 338: score 71.7, E = 9.6e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+ef+a++sHELRTPLtaI g++ l l + +el+
CP000155_3 270 QKDEFIATVSHELRTPLTAIGGALGLVLG------KHGGELPKTV-- 308

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l++++r +rl Lind+L+++++e+g
CP000155_3 309 ----------LKMLKVAHRNCDRLTLLINDILEIEKLESG 338

CP000155_5655: domain 1 of 1, from 314 to 380: score 69.8, E = 3.2e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++a+++HE+R+PL a + +a+lLle ++el++++
CP000155_5 314 SLGRLTAGIAHEIRNPLGAASHAAQLLLE--------SPELTPPD-- 350

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ e+ilr a r++ +i+++L lsr
CP000155_5 351 ----------KQMAEIILRHATRMNGIIENVLSLSRRKVS 380

CP000155_6334: domain 1 of 1, from 248 to 313: score 69.0, E = 5.3e-19
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++f+a+++HELRTPL++++ +++ ++e ++se+
CP000155_6 248 RERQFTADAAHELRTPLAGVKVHLQNAQE---------MAQSEPV-- 283

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l+++lr ++rl +++++lL+lsr++++
CP000155_6 284 ----------SDCLRKALRGLDRLIHMVEQLLQLSRLDHE 313

CP000155_0294: domain 1 of 1, from 301 to 366: score 67.1, E = 1.9e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++fla++sH+LR+PL+a+++++e+L+ l+ q+
CP000155_0 301 DKTRFLAAASHDLRQPLHAMSLFIEALQP----------QLTTRQA- 336

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+ + + r++e + +L n lLd+s++eag
CP000155_0 337 ----------QEIHRNLARSLETMKELFNSLLDISKLEAG 366

CP000155_3432: domain 1 of 1, from 251 to 317: score 66.6, E = 2.6e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s f+a+++HELRTP+t +++ ++++l ++ e+
CP000155_3 251 RLSNFAADIAHELRTPVTNLMTQTQVALS---------KGRGVEE-- 286

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yre l + l+e er++++i+d+L l+r e+g
CP000155_3 287 ---------YREVLYSGLEEFERISKMIDDMLLLARTESG 317

CP000155_2434: domain 1 of 1, from 285 to 353: score 65.3, E = 5.9e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +l+++sH+L+TPL+a++g a Ll + + ls+e+r
CP000155_2 285 LRAALLSSVSHDLKTPLAAMIGSAGSLLQYH-------DRLSDEDR- 323

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e+ et l+eaerl+r i++lLd++r++ g
CP000155_2 324 ----------KELMETTLQEAERLDRYIQNLLDMTRLGYG 353

CP000155_1680: domain 1 of 1, from 297 to 362: score 60.5, E = 1.4e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++e++ ++sHELRTP++ Ir+ ++++++ ++ +
CP000155_1 297 VQREMIHAVSHELRTPVARIRFGVQMIED---------STEDQFL-- 332

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l+ i+++++ l++Li+++L+++r+e+g
CP000155_1 333 ----------HKQLSGIDSDIQELNELIDEILTYARLEQG 362

CP000155_6373: domain 1 of 1, from 252 to 320: score 60.3, E = 1.6e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++fl+++sHEL+TPL++Ir + lL+ee+ + s q
CP000155_6 252 QKQQFLRHVSHELKTPLASIREGVALLQEEV------VGQISHGQ-- 290

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re l + + ++ l++Li++lL + r+
CP000155_6 291 ----------REVLYLVNENGRALQQLIENLLSFNRLNFS 320

CP000155_0064: domain 1 of 1, from 237 to 301: score 60.2, E = 1.7e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++++a++sHELRTPL+ +g +e+L +++ +++
CP000155_0 237 ARRRWIADISHELRTPLAIAKGELEALVDGV-----------RPTN- 271

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ l +i++e+e+l++Lindl +l+ +e g
CP000155_0 272 ----------RDNLLSIQQEIEHLQKLINDLYELTNAEVG 301

CP000155_4835: domain 1 of 1, from 808 to 874: score 59.5, E = 2.7e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++fla++sH+L +PL+a r+++++L + ++ e+
CP000155_4 808 SKTRFLASASHDLLQPLNAARLFSSALSN---------KVKNNEE-- 843

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y e+++ i+++++ +++++ lLd+s+++ag
CP000155_4 844 ---------YSELVSHIDSSLNAAEEILSTLLDISKLDAG 874

CP000155_5773: domain 1 of 1, from 308 to 374: score 59.2, E = 3.2e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++ +++H+LRTPL+ +r+++e+L+ +++++e++
CP000155_5 308 SHQQLTNAVAHDLRTPLARLRFAVEILES---------EDCTAEEQ- 344

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y ++i+ ++++l+ Lin+lL+ sr
CP000155_5 345 ----------ERYRKSIHASIDSLDYLINQLLTHSRYSRA 374

CP000155_4849: domain 1 of 1, from 222 to 288: score 58.3, E = 5.8e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++fla++sH+LR+PL+a++++ae L +++ ++++e+
CP000155_4 222 SKTRFLAAASHDLRQPLNAMSMLAESLSAKM--------DRNSEE-- 258

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ +++r++ +l++L lLd+s++ g
CP000155_4 259 ----------GIIVGKLRRSLSQLSDLFKSLLDMSQLSMG 288

CP000155_2438: domain 1 of 1, from 258 to 326: score 57.5, E = 9.9e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f ++sH+LR+PL aI g++++Lle+ +++ +e +
CP000155_2 258 ELEAFSYSVSHDLRQPLRAIDGFSDALLEDC-------SDQLDEVA- 296

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+yl++++ +++r+ rLi+ +L+lsr
CP000155_2 297 ----------MDYLNRVRAASQRMGRLIDSMLTLSRVTRY 326

CP000155_1575: domain 1 of 1, from 239 to 304: score 56.4, E = 2.1e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ f+a++sH+LR+PL a+++++++L ++l+e
CP000155_1 239 AKTYFMAAASHDLRQPLYAVSLLTDTLSY---------QPLGETA-- 274

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e++++ ++++e l+ L n+lLdlsr eag
CP000155_1 275 ----------QEIVSKQRQAIEVLRTLFNNLLDLSRFEAG 304

CP000155_4954: domain 1 of 1, from 223 to 289: score 55.5, E = 3.6e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++a+l+H++RTPL+a ++ya L +el+ r
CP000155_4 223 SMGRMVASLAHQIRTPLSAAMLYAGHLSQ---------PELDGSLR- 259

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++ + + +l+++++d+L +++ +a+
CP000155_4 260 ----------VKCAQKLMSRLTHLEQQVRDMLIFAKGDAP 289

CP000155_0993: domain 1 of 1, from 131 to 188: score 54.7, E = 6.1e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++l+HE+++PL +Irg+a+lL + el ee +
CP000155_0 131 TSRILIRGLAHEIKNPLGGIRGAAQLLDK----------ELKEEGL- 166

peLRledpeyreyletilreaerllrLindlL<-*
++y+++i++ea+rl++L++++L
CP000155_0 167 ----------HDYTRIIIDEADRLRNLVDRML 188

CP000155_1367: domain 1 of 1, from 281 to 349: score 54.1, E = 9.2e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ks fl+++ HEL+TPL+aI ++ lL e + ++l+ eq
CP000155_1 281 QKSTFLRHVTHELKTPLAAIFEASALLTE------EIPGPLTGEQ-- 319

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+ +e++ + a rl+++i++lL + +
CP000155_1 320 ----------RKVVEILFNNATRLQEMIQQLLNFNSVRLA 349

CP000155_3909: domain 1 of 1, from 209 to 274: score 53.1, E = 1.7e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +++HELRTP++ Ir+ +++L e ++e+r
CP000155_3 209 GHKSLTNAVAHELRTPIARIRFQLDMLNG----------EEDAEER- 244

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e++ i +++++l +L+++lL ++r + +
CP000155_3 245 ----------KELVYGISDDVNQLGELVEELLSYARFDRE 274

CP000155_0560: domain 1 of 1, from 245 to 310: score 52.9, E = 2e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ n++H+LRTPLt +r +elL +l+e+
CP000155_0 245 GVRHVSDNIAHDLRTPLTRVRSRLELLCQ---------KDLPEDA-- 280

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r ++ i+ ea++ll+ n lL ++rie+g
CP000155_0 281 ----------RGVVQEIIGEADQLLQTFNALLRIARIESG 310

CP000155_3919: domain 1 of 1, from 230 to 295: score 52.5, E = 2.6e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +fl+++sHELRTP++++r ++elL++ + +ee
CP000155_3 230 REKDFLRHASHELRTPIAVVRNNVELLQR---------RNPPEEL-- 265

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l +i+r+a ++++ + lL l r + +
CP000155_3 266 ----------TPSLARIERAAYGMQSMTETLLWLGREQRE 295

CP000155_1373: domain 1 of 1, from 222 to 280: score 51.8, E = 4e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+++l ++sHELR PLt +r + e++++
CP000155_1 222 AKRQLLLAISHELRSPLTRMRVAGEMIED------------------ 250

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + + re+++++rLi +lL+ +r+e+g
CP000155_1 251 ----------EQQRSELVREIQHMNRLITELLECERLETG 280

CP000155_5290: domain 1 of 1, from 438 to 503: score 51.5, E = 4.9e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sH+LR+PL+a+ +++++L+ +++ ++ +++++
CP000155_5 438 AKSRFLAAASHDLRQPLHAMGLFISALEPYVE------DATGAKHM- 477

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++++ ++l +L n l+d++r+ea
CP000155_5 478 --------------RRLKSSHDSLTKLFNALMDMARLEAC 503

CP000155_4025: domain 1 of 1, from 458 to 526: score 50.6, E = 8.8e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ +sH+L+ PL +I+ ya+ L e++ + l++
CP000155_4 458 ELDDFAYIASHDLKEPLRGISNYASFLIEDYQ------DRLDDNG-- 496

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r++l+++ r + r++rLi +lL +sr++
CP000155_4 497 ----------RQMLRSLVRLTSRMERLITELLHYSRLGRT 526

CP000155_6616: domain 1 of 1, from 237 to 307: score 50.5, E = 9.6e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++l +++HE+R P++ I+++++l+ + +t++++++
CP000155_6 237 DLRDLLHGVAHEFRSPMARISFALDLADD--------ETDKPAPDP- 274

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++r + + i +++ l+ L+ ++L +sr+e+g
CP000155_6 275 -------GNIRALHQEISGALDELSGLVKEVLSYSRLEHG 307

CP000155_0202: domain 1 of 1, from 268 to 336: score 48.7, E = 3.1e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++la++s E+R P+taI+g++ l++++l +e e++
CP000155_0 268 VRARLLAMVSQEIRSPMTAIQGAVMLCKNGLT------GEIQEKT-- 306

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+l++++r er+++Li+ l d+ +i++
CP000155_0 307 ----------LHMLHVAERNCERMQKLIEVLFDIYQIQNH 336

CP000155_4140: domain 1 of 1, from 435 to 500: score 46.8, E = 1.1e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ f++ l HE RTPL+ ++ ++lL+ +++e+++
CP000155_4 435 YMESFASKLTHECRTPLAIVSSSLQLLES----------AADEQEK- 470

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+eyl +++ aer+++L+ +++ sr+ea
CP000155_4 471 ----------QEYLGRARAGAERISALLTAMRQASRLEAT 500

CP000155_0314: domain 1 of 1, from 413 to 481: score 46.1, E = 1.7e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++ a++ HEL++PLta+r+ya+ ++++ + +++e+
CP000155_0 413 LLGQLSAGINHELNQPLTALRTYAQNAQAFIE------RNMPEKA-- 451

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l+ i ++++ ++i +l ++r ea+
CP000155_0 452 ----------QLNLREIVGLTDHMASIIGQLKIFARKEAN 481

CP000155_4700: domain 1 of 1, from 257 to 325: score 45.3, E = 2.7e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ +sH+L PL Ir++ + L+ ++ ++l +
CP000155_4 257 ELQDFAFVASHDLQEPLRKIRAFGDRLQQKYA------DKLEDSG-- 295

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y+++++++aer++rLindlL +sr +
CP000155_4 296 ----------ADYIRRMQSAAERMSRLINDLLSFSRVSTK 325

CP000155_1763: domain 1 of 1, from 254 to 320: score 43.1, E = 1.2e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++f+++++HELRTPL+ +r +++++l+ + ++ e +
CP000155_1 254 RERRFTSDAAHELRTPLAELRIATDIALR---------AQQNQERL- 290

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++ + + ++++ +L+n +L l+r ++g
CP000155_1 291 ----------LTAVRHANHLSHSMANLVNSMLLLARFQSG 320

CP000155_4699: domain 1 of 1, from 7 to 71: score 41.8, E = 2.9e-11
*->lanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrlpeLRl
+a l+H+LR+PL++I+ +ael++ +l t+++ e++
CP000155_4 7 IAKLAHDLRNPLNSISVNAELAKLQLQ------TNRDKEEI------ 41

edpeyreyletilreaerllrLindlLdlsrieag<-*
+e+il+e +r+++ indl s +a
CP000155_4 42 -----LVCVERILEECKRCSARINDLVNASATDAD 71

CP000155_4974: domain 1 of 1, from 304 to 374: score 41.0, E = 4.6e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++e++a+++HE ++PLtaI y+ ++ + a+ + l+ +
CP000155_4 304 MMGEMAAGIAHEVNQPLTAIVNYIRVANR-----IAKAEQLDKALM- 344

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e l++i+++ r ++ i+ ++d+ + +
CP000155_4 345 ----------DETLKKIESQCLRASQVIQHIRDFVKKPLQ 374

CP000155_5987: domain 1 of 1, from 753 to 818: score 40.3, E = 7.5e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++a+++HE+ +P+t+I +a+ L+ + +ee
CP000155_5 753 SVGRLAAGVAHEIGNPVTGIACLAQNLKL---------MTSNEEV-- 788

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e il +++r +r+++ l+ ++r ++
CP000155_5 789 ----------LETAGHILVQTQRVSRILQTLMNFARSGNY 818

CP000155_1569: domain 1 of 1, from 292 to 357: score 37.1, E = 6.1e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++ + ++H++RTPL+++r++++ L++ ++ ++
CP000155_1 292 RMQRYTGEAAHQIRTPLAGLRAALQNLRD---------HPDIDDP-- 327

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++i +++++l+ +++lL + i +
CP000155_1 328 ----------KLVYNRIMQSVDQLNTTVSQLLNQATITHR 357

CP000155_0891: domain 1 of 1, from 476 to 534: score 36.0, E = 1.2e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++++ a+++HEL++PLta+ y+ + + +l+
CP000155_0 476 AMGRMSAAIAHELNQPLTALVSYVAMGRLYLE--------------- 507

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e ++ ++ +++L++++ +ri ++
CP000155_0 508 ----------QEQKDKSAATLDKMDALVQRI---ARISSQ 534

CP000155_0671: domain 1 of 1, from 369 to 421: score 31.8, E = 1.9e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++a+++HELR+PL+ I ++a
CP000155_0 369 ELGGLTAAIAHELRNPLNIITMAAAQTDP------------------ 397

peLRledpeyreyletilreaerllrLindlLdls<-*
++ e i +++er + Li d+L+++
CP000155_0 398 -----------RIREHISKQVERAELLIKDVLTYA 421

CP000155_5813: domain 1 of 1, from 284 to 325: score 30.1, E = 5.6e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +++++sH+L+TP+t +r+ ae+L + + qr
CP000155_5 284 DRETLFSAISHDLKTPITRLRLRAEMLDD-------------DAQR- 316

peLRledpeyreyletilr<-*
++++ +++
CP000155_5 317 ----------GKFIQDLED 325

CP000155_4120: domain 1 of 1, from 233 to 297: score 27.7, E = 2.7e-07
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +fl ++sHE+RTPL+ I++ +++L+ ++ + +
CP000155_4 233 REKQFLKHASHEMRTPLAIIQASLDTLEL---------QTGEAGK-- 268

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l++++ ++ + L + lL l+r +
CP000155_4 269 -----------ASLRRAQLAGANMALLSSALLWLARESPQ 297


Histogram of all scores:
score obs exp (one = represents 21 sequences)
----- --- ---
-15 7 0|=
-14 68 0|====
-13 167 5|*=======
-12 364 154|=======*==========
-11 639 803|=============================== *
-10 1085 1490|==================================================== *
-9 1217 1539|==========================================================*
-8 1124 1152|======================================================*
-7 794 726|==================================*===
-6 514 417|===================*=====
-5 305 229|==========*====
-4 167 122|=====*==
-3 115 64|===*==
-2 56 34|=*=
-1 33 17|*=
0 21 9|*
1 15 4|*
2 6 2|*
3 5 1|*
4 3 0|=
5 0 0|
6 1 0|=
7 0 0|
> 8 72 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 5799.5840
P(chi-square) = 0

Total sequences searched: 6782

Whole sequence top hits:
tophits_s report:
Total hits: 61
Satisfying E cutoff: 61
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 60
Satisfying E cutoff: 60
Total memory: 45K


Acknowledgements:

This research is funded by:

Developed by: