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Thermotogae
Classification of phyla is from NCBI page
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2 accessions found for Rhodoferax ferrireducens T118  

Data for CP000267  

Available Atlases
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hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP000267.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP000267_0566 CDS_600012-598582 92.1 9.6e-26 1
CP000267_3717 CDS_4225449-4222687 89.1 6.6e-25 1
CP000267_2223 CDS_2480779-2477750 85.9 5.4e-24 1
CP000267_1735 CDS_1904677-1901576 85.4 7.5e-24 1
CP000267_3491 CDS_3948265-3945242 79.5 3.5e-22 1
CP000267_2311 CDS_2595120-2596928 76.8 2.1e-21 1
CP000267_3345 CDS_3785860-3782252 73.8 1.4e-20 1
CP000267_3888 CDS_4417706-4419160 64.7 5.5e-18 1
CP000267_2496 CDS_2801612-2800101 64.5 6.4e-18 1
CP000267_0415 CDS_431306-432694 64.0 8.9e-18 1
CP000267_2930 CDS_3287749-3288855 63.7 1.1e-17 1
CP000267_0494 CDS_522436-523788 63.5 1.2e-17 1
CP000267_2738 CDS_3078666-3077245 61.2 5.6e-17 1
CP000267_3758 CDS_4263693-4265027 60.5 8.4e-17 1
CP000267_3516 CDS_3976649-3975621 60.1 1.1e-16 1
CP000267_3291 CDS_3711606-3713360 59.5 1.7e-16 1
CP000267_2693 CDS_3028506-3026872 57.5 6.1e-16 1
CP000267_3530 CDS_3995188-3992861 55.3 2.6e-15 1
CP000267_2001 CDS_2201783-2203744 54.4 4.6e-15 1
CP000267_1793 CDS_1965965-1964484 51.4 3.3e-14 1
CP000267_1071 CDS_1167789-1169231 50.2 7.3e-14 1
CP000267_0499 CDS_529088-527805 47.6 4e-13 1
CP000267_2804 CDS_3155159-3153360 45.5 1.5e-12 1
CP000267_2716 CDS_3056325-3054172 45.3 1.7e-12 1
CP000267_2355 CDS_2644269-2642854 44.3 3.3e-12 1
CP000267_3399 CDS_3845189-3843318 43.6 5.4e-12 1
CP000267_2173 CDS_2419641-2417053 40.1 5.2e-11 1
CP000267_3585 CDS_4061806-4060475 40.1 5.2e-11 1
CP000267_1115 CDS_1222683-1221058 39.9 6.1e-11 1
CP000267_3031 CDS_3418278-3416653 39.9 6.1e-11 1
CP000267_3044 CDS_3433914-3435386 38.5 1.5e-10 1
CP000267_3465 CDS_3919394-3917937 37.2 3.4e-10 2
CP000267_3035 CDS_3423416-3424861 35.6 9.6e-10 1
CP000267_1456 CDS_1597428-1599458 35.6 9.7e-10 1
CP000267_4058 CDS_4598872-4600221 34.7 1.8e-09 1
CP000267_2684 CDS_3015984-3017408 34.0 2.7e-09 1
CP000267_3068 CDS_3460745-3462118 30.4 2.9e-08 1
CP000267_1061 CDS_1157168-1156407 29.9 4.1e-08 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP000267_0566 1/1 213 279 .. 1 87 [] 92.1 9.6e-26
CP000267_3717 1/1 681 748 .. 1 87 [] 89.1 6.6e-25
CP000267_2223 1/1 267 332 .. 1 87 [] 85.9 5.4e-24
CP000267_1735 1/1 311 376 .. 1 87 [] 85.4 7.5e-24
CP000267_3491 1/1 622 689 .. 1 87 [] 79.5 3.5e-22
CP000267_2311 1/1 227 294 .. 1 87 [] 76.8 2.1e-21
CP000267_3345 1/1 735 801 .. 1 87 [] 73.8 1.4e-20
CP000267_3888 1/1 244 310 .. 1 87 [] 64.7 5.5e-18
CP000267_2496 1/1 272 340 .. 1 87 [] 64.5 6.4e-18
CP000267_0415 1/1 242 308 .. 1 87 [] 64.0 8.9e-18
CP000267_2930 1/1 144 209 .. 1 87 [] 63.7 1.1e-17
CP000267_0494 1/1 229 295 .. 1 87 [] 63.5 1.2e-17
CP000267_2738 1/1 248 316 .. 1 87 [] 61.2 5.6e-17
CP000267_3758 1/1 223 288 .. 1 87 [] 60.5 8.4e-17
CP000267_3516 1/1 126 191 .. 1 87 [] 60.1 1.1e-16
CP000267_3291 1/1 337 402 .. 1 87 [] 59.5 1.7e-16
CP000267_2693 1/1 302 368 .. 1 87 [] 57.5 6.1e-16
CP000267_3530 1/1 529 601 .. 1 87 [] 55.3 2.6e-15
CP000267_2001 1/1 281 346 .. 1 87 [] 54.4 4.6e-15
CP000267_1793 1/1 261 329 .. 1 87 [] 51.4 3.3e-14
CP000267_1071 1/1 260 325 .. 1 87 [] 50.2 7.3e-14
CP000267_0499 1/1 201 262 .. 1 87 [] 47.6 4e-13
CP000267_2804 1/1 365 431 .. 1 87 [] 45.5 1.5e-12
CP000267_2716 1/1 339 405 .. 1 87 [] 45.3 1.7e-12
CP000267_2355 1/1 235 300 .. 1 87 [] 44.3 3.3e-12
CP000267_3399 1/1 398 466 .. 1 87 [] 43.6 5.4e-12
CP000267_2173 1/1 607 677 .. 1 87 [] 40.1 5.2e-11
CP000267_3585 1/1 233 291 .. 1 87 [] 40.1 5.2e-11
CP000267_1115 1/1 309 383 .. 1 87 [] 39.9 6.1e-11
CP000267_3031 1/1 309 383 .. 1 87 [] 39.9 6.1e-11
CP000267_3044 1/1 270 336 .. 1 87 [] 38.5 1.5e-10
CP000267_3035 1/1 268 334 .. 1 87 [] 35.6 9.6e-10
CP000267_1456 1/1 437 507 .. 1 87 [] 35.6 9.7e-10
CP000267_4058 1/1 201 296 .. 1 87 [] 34.7 1.8e-09
CP000267_2684 1/1 258 317 .. 1 87 [] 34.0 2.7e-09
CP000267_3068 1/1 237 302 .. 1 87 [] 30.4 2.9e-08
CP000267_1061 1/1 27 95 .. 1 87 [] 29.9 4.1e-08
CP000267_3465 1/2 238 263 .. 1 26 [. 27.5 1.9e-07

Alignments of top-scoring domains:
CP000267_0566: domain 1 of 1, from 213 to 279: score 92.1, E = 9.6e-26
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+an+sHE+RTPLt++ g++e+L++ +l++e+r
CP000267_0 213 MRRDFVANVSHEIRTPLTVLAGFVETLQT---------LPLNDEER- 249

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++yl + ++a r++ L+ndlL lsr+e
CP000267_0 250 ----------ARYLALMAQQAGRMQTLVNDLLVLSRLEGS 279

CP000267_3717: domain 1 of 1, from 681 to 748: score 89.1, E = 6.6e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++f++++ HELRTPLt+Ir++aelL++ d+ qr
CP000267_3 681 LKDDFMSSVTHELRTPLTSIRALAELLRD--------DPRIALAQR- 718

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+++e+i +e+erl+rL+n++Ld+++ie+g
CP000267_3 719 ----------RQFIEIIVSETERLSRLVNQVLDMAKIESG 748

CP000267_2223: domain 1 of 1, from 267 to 332: score 85.9, E = 5.4e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHE+RTP++a++g++ lLl+ t+ls+ q
CP000267_2 267 AKSEFLANMSHEIRTPMNAVLGMLYLLLK---------TDLSPTQ-- 302

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ yl +++ +a++ll ind+Ld+s+ieag
CP000267_2 303 ----------HNYLAKAQGAAHSLLGTINDILDISKIEAG 332

CP000267_1735: domain 1 of 1, from 311 to 376: score 85.4, E = 7.5e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+flan+sHE+RTP++a++g++ + le ++l +eq
CP000267_1 311 AKSQFLANMSHEIRTPMNAVLGLTRMVLE---------SDLKPEQ-- 346

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re l ++ ++++ l r+ind+Ld+srieag
CP000267_1 347 ----------REQLIKVSKSGRALVRIINDILDFSRIEAG 376

CP000267_3491: domain 1 of 1, from 622 to 689: score 79.5, E = 3.5e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aksefl+++sHELR PL+aI+g+a+l++ ++ ++ ++ q
CP000267_3 622 AKSEFLSSMSHELRSPLNAILGFAQLMESGV-------PPPTATQ-- 659

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++ il+ + +ll+Lin++Ldl+ ie+g
CP000267_3 660 ----------KASIDQILHGGWYLLELINEILDLALIESG 689

CP000267_2311: domain 1 of 1, from 227 to 294: score 76.8, E = 2.1e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aksefl+++sHELR PL+a++g+a+l+++ g ++ ++ q
CP000267_2 227 AKSEFLSGMSHELRSPLNAVLGFAQLIET-------GTPAPTPGQ-- 264

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ le ilr + +ll Lin++Ldls e+g
CP000267_2 265 ----------QASLEQILRGGWYLLTLINEILDLSLVESG 294

CP000267_3345: domain 1 of 1, from 735 to 801: score 73.8, E = 1.4e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+ ++++sHELRTPL++I+gya+l+ e d+ +
CP000267_3 735 AKSRYISAISHELRTPLNSILGYAQLMGE--------DPSIPVHR-- 771

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++++i+r +e+ll+Li+ Ld++ ie+g
CP000267_3 772 ----------QQAVSVIKRGGEHLLSLIEGTLDIAHIESG 801

CP000267_3888: domain 1 of 1, from 244 to 310: score 64.7, E = 5.5e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +fla+++H+L+TPL+++r+ ael+++ + +s+e++
CP000267_3 244 TQKRFLADAAHQLKTPLAGLRMQAELAQR---------EGASAEEL- 280

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l+ i r++ r + +n+lL l+r+e+
CP000267_3 281 ----------KQSLRQIGRASIRATHSVNQLLALARAESS 310

CP000267_2496: domain 1 of 1, from 272 to 340: score 64.5, E = 6.4e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+s fla++sH+LRTPL+aI g+a+ L++ ++++lse+++
CP000267_2 272 LQSTFLAAISHDLRTPLAAIVGAASSLQT-------QRDKLSEPEQ- 310

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++l +i +ea +l+ ++ L+l ++
CP000267_2 311 ----------DRLLGSIVSEASYLSTVTENTLQLVQLTGA 340

CP000267_0415: domain 1 of 1, from 242 to 308: score 64.0, E = 8.9e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ s+f ++++HELRTP++ +++ +++ l ++++++
CP000267_0 242 RISDFSSDIAHELRTPVSNLMTQTQVVLS---------RARDADE-- 277

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yr +le+ +e er+ r+i+d+L l+++++g
CP000267_0 278 ---------YRSILESNAEEFERMARMISDMLLLAKADNG 308

CP000267_2930: domain 1 of 1, from 144 to 209: score 63.7, E = 1.1e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a e+++nl+HE+++PL +Irg+a+lL+ e+++ ++
CP000267_2 144 ANKELIRNLAHEIKNPLGGIRGAAQLLEL----------EMDSAEL- 179

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
ey+++i++ea+rl+ L+++lL r +
CP000267_2 180 ----------TEYTQVIIHEADRLQTLVDRLLAPHRRPHL 209

CP000267_0494: domain 1 of 1, from 229 to 295: score 63.5, E = 1.2e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++f+a+++HELRTP++aIr+ a+++l + ++ qr
CP000267_0 229 SERRFTADAAHELRTPIAAIRAQAQVALG---------AGHDAAQR- 265

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+l+ l +r +L+++lL+l+r+ea
CP000267_0 266 ----------DHALQFTLAGCDRATHLVEQLLTLARLEAA 295

CP000267_2738: domain 1 of 1, from 248 to 316: score 61.2, E = 5.6e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ks+fl+++sHEL+TPL+++r ++lL++++ +els+eq
CP000267_2 248 DKSRFLRHISHELKTPLASLREGVSLLEDGVA------GELSPEQ-- 286

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+ +++++ a l+ +i+dlL + + +
CP000267_2 287 ----------REIAQILRHNAGVLQGQIEDLLRFNTAAFE 316

CP000267_3758: domain 1 of 1, from 223 to 288: score 60.5, E = 8.4e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ f+a+++HELR PL+a+++ ++ L++ ++ ++
CP000267_3 223 AQNNFVADAAHELRSPLAALKLQVQGLRR---------AADDATR-- 258

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++ ++r rL+++lL l+r +++
CP000267_3 259 ----------DVAINRLNAGIDRATRLVEQLLVLARQQSN 288

CP000267_3516: domain 1 of 1, from 126 to 191: score 60.1, E = 1.1e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ ++ +++HE+++PL +++ y+e +++ + ++
CP000267_3 126 ALGTMVGGVAHEINNPLMGVMNYVEHARD---------KATDASS-- 161

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+e l+++l+e++r+ ++++++L + r +ag
CP000267_3 162 ----------KEVLNKALHEIDRIKKIVSNMLIFVRPDAG 191

CP000267_3291: domain 1 of 1, from 337 to 402: score 59.5, E = 1.7e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++++ +++HE+R+PL+aI + lL e + ++++
CP000267_3 337 SMGRMSTAVAHEIRNPLAAITQANALLDE---------DLIDPKH-- 372

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++++ +++ a+rl+++++d+L sr ++
CP000267_3 373 ----------KQLTRMVQQNAKRLEKIVEDILNVSRVQQL 402

CP000267_2693: domain 1 of 1, from 302 to 368: score 57.5, E = 6.1e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ + ++++++HEL++PLt+++++++l+++ ++ ++e+
CP000267_2 302 SIGVLASGIAHELNNPLTGVLTFTSLMRK--------KAADGSED-- 338

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l+ ++re++r+ ++i++lLd++r +
CP000267_2 339 ----------AADLDLVIRETKRCASIIRRLLDFAREKVP 368

CP000267_3530: domain 1 of 1, from 529 to 601: score 55.3, E = 2.6e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +e ++ l+HE+++PLt I++ ae L+++l ++ +++++
CP000267_3 529 AWGEVARRLAHEIKNPLTPIQLSAERLEMKLT------GKIAPPEQA 569

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++ti +++ + rL+n+++d++r+ a
CP000267_3 570 LL--------TKSVKTIVTQVDAMKRLVNEFRDYARLPAA 601

CP000267_2001: domain 1 of 1, from 281 to 346: score 54.4, E = 4.6e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+fla++sH+LR+P++a+ +++ L + ++++
CP000267_2 281 AKSRFLAAASHDLRQPMHALGLFVARLAQ---------LPHDAPT-- 316

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++ +++ l++L++ lLd sr+ea+
CP000267_2 317 ----------THLIGNLDASVQALQELLDGLLDVSRLEAQ 346

CP000267_1793: domain 1 of 1, from 261 to 329: score 51.4, E = 3.3e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f ++sH+LR PL ++ g++ +L e++ ++l+ee
CP000267_1 261 ELEAFSYSVSHDLRGPLRSMDGFSLVLIEDYG------DKLDEEG-- 299

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++l++i+ +++r+ +Li+dlL ls+
CP000267_1 300 ----------KDALQRIRAASQRMGNLIDDLLRLSQVTRA 329

CP000267_1071: domain 1 of 1, from 260 to 325: score 50.2, E = 7.3e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +fl +++H+LRTPL++++ +el+l+ e +++ +
CP000267_1 260 QEKRFLNDAAHQLRTPLAGLISQTELALA----------ETDPQAL- 295

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l+++l a+r +L+++lL l+r ea+
CP000267_1 296 ----------HARLSKVLAGAQRSAHLVQQLLSLARNEAE 325

CP000267_0499: domain 1 of 1, from 201 to 262: score 47.6, E = 4e-13
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +lan+sHELR PLt Ir+ +el+ ++ ++ +
CP000267_0 201 SQKSLLANASHELRSPLTRIRMGLELMGS---------SASPAFK-- 236

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ i r + l++Li+++L sr++a
CP000267_0 237 --------------NEISRNISELDQLIEEILLASRLDAR 262

CP000267_2804: domain 1 of 1, from 365 to 431: score 45.5, E = 1.5e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a++ ++ ++H+L++PL ++ +a+l+++ e++++qr
CP000267_2 365 ALGTMVGEIAHQLNNPLVGVVNLAQLAKR----------EADDPQRT 401

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re+l i+r++ + +Li+ +L +++ +
CP000267_2 402 ----------RELLTEIHRAGADCHALIQSMLRFAKVSSC 431

CP000267_2716: domain 1 of 1, from 339 to 405: score 45.3, E = 1.7e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a + ++ +++H++++ + aI+g++el++ ++ +++s+
CP000267_2 339 AVGTMAGGIAHDFNNIIGAILGNVELAKQDA-------GARSPAL-- 376

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l+ i+++++r ++L++++L++sr e++
CP000267_2 377 -----------VSLSEIDKAGRRARDLVRQILTFSRNESP 405

CP000267_2355: domain 1 of 1, from 235 to 300: score 44.3, E = 3.3e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+ +f+an+sH+L+TPLt++r+ ++ +l ++ +
CP000267_2 235 AQVRFVANASHQLKTPLTVLRAQVDHALL---------QTDLASM-- 270

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +++ ++++++ rL+ +lL l+r ea+
CP000267_2 271 ----------RAIVSHLHESTDETGRLLAQLLSLARSEAQ 300

CP000267_3399: domain 1 of 1, from 398 to 466: score 43.6, E = 5.4e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ ++++HEL++PL+a+r+++ ++++l + + +++
CP000267_3 398 VIGQLSSGIAHELNQPLAALRTLSGNARKFL-------ARGDQQTA- 436

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l++i + ++r+ rL +l ++r +g
CP000267_3 437 ----------DSNLNRIADLVDRMGRLTGQLKSFARKSSG 466

CP000267_2173: domain 1 of 1, from 607 to 677: score 40.1, E = 5.2e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++e++++++HEL++PLtaI y+ + + +++ se+++
CP000267_2 607 TMGEMASSVAHELNQPLTAINNYCNGMVSRI-----KSQQISEDEL- 647

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+le+ ++a+r ++i +++ + + ++
CP000267_2 648 ----------LGALEKTAKQAQRAGQIIHRIRSFVKRSEP 677

CP000267_3585: domain 1 of 1, from 233 to 291: score 40.1, E = 5.2e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s+ la++sH+LRTPLt +r+ ael +
CP000267_3 233 ERSRALAAVSHDLRTPLTRLRLRAELVDD------------------ 261

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + + + +++ + ++i+ Ld+ r +
CP000267_3 262 ----------ETLRDQMAADLDDMAAMIDATLDYLRGLQA 291

CP000267_1115: domain 1 of 1, from 309 to 383: score 39.9, E = 6.1e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkv.lagdtelseeqr
a ++++a+l+HEL +PLta++ ya+++++ + ++++g ++ +q+
CP000267_1 309 AAGQMAAALAHELSQPLTALSNYAQACQMLV--TdAPGLQPDHRDQL 353

lpeLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e +++ ++a+r + i +l+d+ r ++
CP000267_1 354 -----------VEVMQRMVDDANRAGNVIKRLRDFFRTGST 383

CP000267_3031: domain 1 of 1, from 309 to 383: score 39.9, E = 6.1e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkv.lagdtelseeqr
a ++++a+l+HEL +PLta++ ya+++++ + ++++g ++ +q+
CP000267_3 309 AAGQMAAALAHELSQPLTALSNYAQACQMLV--TdAPGLQPDHRDQL 353

lpeLRledpeyreyletilreaerllrLindlLdlsrieag<-*
e +++ ++a+r + i +l+d+ r ++
CP000267_3 354 -----------VEVMQRMVDDANRAGNVIKRLRDFFRTGST 383

CP000267_3044: domain 1 of 1, from 270 to 336: score 38.5, E = 1.5e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a ++++a+++HE+++PL +++ ++++L++ + +++ +
CP000267_3 270 AVGRLTASIAHEINNPLGGMLNAISTLKR---------HGNPDPVT- 306

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++ ++r + ++++ + lL ++ +
CP000267_3 307 ----------QKTVSLLERGLSQIRETVAALLVEAKVKSR 336

CP000267_3035: domain 1 of 1, from 268 to 334: score 35.6, E = 9.6e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++a+++HE+++PL+++++++++L+ + se+ r
CP000267_3 268 TVGRMTAAVAHEINNPLAGLITATQTLRL---------HGDSEPIR- 304

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ ++r +++++ + lL +r e
CP000267_3 305 ----------LSTVDLLERGLQQIRTTVAALLPQARREDR 334

CP000267_1456: domain 1 of 1, from 437 to 507: score 35.6, E = 9.7e-10
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a +e +++l+HEL++PL a++ +a Ll+ ++ rl
CP000267_1 437 AVGEVASTLAHELNQPLGALSSFANGLLN---------RLRGGNIRL 474

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+eL + + ++ r aer i+++ ++r ++
CP000267_1 475 DEL-------EPVVARMARLAERAGGVIQRVNAFARRREL 507

CP000267_4058: domain 1 of 1, from 201 to 296: score 34.7, E = 1.8e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldk....v.lagdtels
++++++a+++HEL++P++ ++g++++L++++ + ++ +++++ +l+
CP000267_4 201 SLGRLVAGVAHELNNPISFVLGNVHVLQRYGARlsryLqALHQLDLP 247

eeqrlpeLR.l.....edpeyreyletilreaerllrLindlLdlsriea
++ + +LR + + ++ ++ + l+ a+r +++n l ++ + +
CP000267_4 248 APVQ--ALRaElridhLVGDLPSLMAGTLEGAQRTTDIVNGLKRFATAAH 295

g<-*
+
CP000267_4 296 E 296

CP000267_2684: domain 1 of 1, from 258 to 317: score 34.0, E = 2.7e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +la++sH+LRTPL+ +r+ +el + + e +
CP000267_2 258 DRAVMLAGISHDLRTPLARLRLETEL------------SVVDVEAQ- 291

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ ++ +l+++i +Ld++r ++
CP000267_2 292 --------------ANMSADIAQLDAIIGKFLDYARPGSV 317

CP000267_3068: domain 1 of 1, from 237 to 302: score 30.4, E = 2.9e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+ n++H+LRTPL+++ + ++ +l+ +e e
CP000267_3 237 RRGAFIQNAAHQLRTPLAVLTTQISDALR---------AENKEIG-- 272

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l ++r +++ rL+n++L+ls +ea
CP000267_3 273 ----------DRSLIAAHRTLQQTGRLVNQFLTLSSAEAY 302

CP000267_1061: domain 1 of 1, from 27 to 95: score 29.9, E = 4.1e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ ++sH+LR L +++ya++++e+l +e+ +++
CP000267_1 27 ELDDFTYAVSHDLRASLRHVSAYAQIIQEDL-------GERLTPDI- 65

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l t++++a+++ r+i+ l +lsr+
CP000267_1 66 ----------AAHLATVQQAAKQMTRQIEGLTELSRLTRL 95

CP000267_3465: domain 1 of 2, from 238 to 263: score 27.5, E = 1.9e-07
*->akseflanlsHELRTPLtaIrgyael<-*
++++f+ +++H+LRTPL+++++ +e+
CP000267_3 238 SQRRFVTDAAHQLRTPLAGLQAQVEA 263


Histogram of all scores:
score obs exp (one = represents 14 sequences)
----- --- ---
-14 11 0|=
-13 40 3|*==
-12 107 95|======*=
-11 380 494|============================ *
-10 706 917|=================================================== *
-9 817 946|==========================================================*
-8 735 709|==================================================*==
-7 535 446|===============================*=======
-6 339 257|==================*======
-5 192 141|==========*===
-4 115 75|=====*===
-3 68 39|==*==
-2 35 20|=*=
-1 20 10|*=
0 10 5|*
1 3 2|*
2 6 1|*
3 2 0|=
4 1 0|=
5 2 0|=
6 0 0|
7 1 0|=
> 8 45 -|====


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 217.7798
P(chi-square) = 1.297e-309

Total sequences searched: 4170

Whole sequence top hits:
tophits_s report:
Total hits: 38
Satisfying E cutoff: 38
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 38
Satisfying E cutoff: 38
Total memory: 36K


Acknowledgements:

This research is funded by:

Developed by: