Acidobacteria Actinobacteria Alphaproteobacteria
Aquificae Bacteroidetes/Chlorobi Betaproteobacteria
Chlamydiae/Verrucomicrobia Chloroflexi Cyanobacteria
Deinococcus-Thermus Deltaproteobacteria Epsilonproteobacteria
Firmicutes Fusobacteria Gammaproteobacteria
Other Bacteria Planctomycetes Spirochaetes
Thermotogae
Classification of phyla is from NCBI page
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264 projects found  

1 accessions found for Saccharophagus degradans 2-40  

Data for CP000282  

Available Atlases
Other Plots
hmmsearch - search a sequence database with a profile HMM
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /home/projects/MicrobialGenomicsGroup/Packages/hmmdata-1.0.0.package/Resources/noarch/TCS/HisKA_1.hmm [HisKA]
Sequence database: CP000282.Gprot.fsa
per-sequence score cutoff: >= 26.8 [TC1]
per-domain score cutoff: >= 26.8 [TC2]
per-sequence Eval cutoff: [none]
per-domain Eval cutoff: [none]
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query HMM: HisKA
Accession: PF00512.12
Description: His Kinase A (phosphoacceptor) domain
[HMM has been calibrated; E-values are empirical estimates]

Scores for complete sequences (score includes all domains):
Sequence Description Score E-value N
-------- ----------- ----- ------- ---
CP000282_3643 CDS_4629226-4631523 103.8 4.3e-29 1
CP000282_2236 CDS_2845997-2848825 95.8 8.1e-27 1
CP000282_1407 CDS_1826480-1828537 91.1 1.8e-25 1
CP000282_3112 CDS_3984897-3987482 90.9 2e-25 1
CP000282_3113 CDS_3987552-3992513 90.4 2.9e-25 1
CP000282_0404 CDS_500303-501799 88.9 7.3e-25 1
CP000282_0264 CDS_329470-331470 86.0 5e-24 1
CP000282_2911 CDS_3703708-3701369 83.2 3.1e-23 1
CP000282_0665 CDS_848025-852605 80.9 1.4e-22 1
CP000282_2904 CDS_3694423-3692579 77.5 1.3e-21 1
CP000282_3830 CDS_4838740-4840044 75.8 3.9e-21 1
CP000282_2484 CDS_3144094-3140765 75.3 5.3e-21 1
CP000282_2969 CDS_3780587-3783985 74.7 8.1e-21 1
CP000282_3129 CDS_4009896-4011065 73.0 2.4e-20 1
CP000282_3695 CDS_4688767-4690287 66.4 1.8e-18 1
CP000282_3204 CDS_4088258-4090786 62.0 3.1e-17 1
CP000282_2550 CDS_3240385-3241971 61.5 4.3e-17 1
CP000282_3108 CDS_3980550-3981995 61.1 5.4e-17 1
CP000282_1945 CDS_2450726-2452138 60.4 8.7e-17 1
CP000282_0500 CDS_613340-612267 60.2 1e-16 1
CP000282_2719 CDS_3450717-3452165 59.7 1.4e-16 2
CP000282_2440 CDS_3090051-3088684 58.3 3.4e-16 1
CP000282_0291 CDS_361672-362946 57.3 6.6e-16 1
CP000282_3375 CDS_4318933-4316648 56.6 1.1e-15 1
CP000282_0551 CDS_671946-673235 52.3 1.7e-14 1
CP000282_1013 CDS_1299114-1297042 45.5 1.4e-12 1
CP000282_2627 CDS_3329379-3327031 45.5 1.5e-12 1
CP000282_3430 CDS_4379883-4378609 45.5 1.5e-12 1
CP000282_1724 CDS_2202459-2201071 44.5 2.8e-12 2
CP000282_3365 CDS_4300485-4303487 42.9 8.2e-12 1
CP000282_1568 CDS_2016225-2018225 42.6 9.5e-12 1
CP000282_2188 CDS_2789662-2788334 40.9 3e-11 1
CP000282_2293 CDS_2921387-2922727 39.4 8e-11 1
CP000282_0660 CDS_841917-844673 31.7 1.2e-08 1
CP000282_2915 CDS_3705831-3707078 30.6 2.4e-08 1
CP000282_0262 CDS_327392-328909 30.5 2.7e-08 1

Parsed for domains:
Sequence Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
CP000282_3643 1/1 252 317 .. 1 87 [] 103.8 4.3e-29
CP000282_2236 1/1 271 336 .. 1 87 [] 95.8 8.1e-27
CP000282_1407 1/1 303 369 .. 1 87 [] 91.1 1.8e-25
CP000282_3112 1/1 198 263 .. 1 87 [] 90.9 2e-25
CP000282_3113 1/1 1005 1070 .. 1 87 [] 90.4 2.9e-25
CP000282_0404 1/1 271 338 .. 1 87 [] 88.9 7.3e-25
CP000282_0264 1/1 144 209 .. 1 87 [] 86.0 5e-24
CP000282_2911 1/1 404 470 .. 1 87 [] 83.2 3.1e-23
CP000282_0665 1/1 871 939 .. 1 87 [] 80.9 1.4e-22
CP000282_2904 1/1 387 454 .. 1 87 [] 77.5 1.3e-21
CP000282_3830 1/1 205 271 .. 1 87 [] 75.8 3.9e-21
CP000282_2484 1/1 418 483 .. 1 87 [] 75.3 5.3e-21
CP000282_2969 1/1 671 737 .. 1 87 [] 74.7 8.1e-21
CP000282_3129 1/1 162 230 .. 1 87 [] 73.0 2.4e-20
CP000282_3695 1/1 281 349 .. 1 87 [] 66.4 1.8e-18
CP000282_3204 1/1 620 688 .. 1 87 [] 62.0 3.1e-17
CP000282_2550 1/1 309 375 .. 1 87 [] 61.5 4.3e-17
CP000282_3108 1/1 247 315 .. 1 87 [] 61.1 5.4e-17
CP000282_1945 1/1 245 311 .. 1 87 [] 60.4 8.7e-17
CP000282_0500 1/1 129 186 .. 1 79 [. 60.2 1e-16
CP000282_2719 1/2 258 322 .. 1 87 [] 59.6 1.4e-16
CP000282_2440 1/1 243 308 .. 1 87 [] 58.3 3.4e-16
CP000282_0291 1/1 207 272 .. 1 87 [] 57.3 6.6e-16
CP000282_3375 1/1 529 597 .. 1 87 [] 56.6 1.1e-15
CP000282_0551 1/1 208 273 .. 1 87 [] 52.3 1.7e-14
CP000282_1013 1/1 465 530 .. 1 87 [] 45.5 1.4e-12
CP000282_2627 1/1 546 614 .. 1 87 [] 45.5 1.5e-12
CP000282_3430 1/1 222 284 .. 1 87 [] 45.5 1.5e-12
CP000282_3365 1/1 761 826 .. 1 87 [] 42.9 8.2e-12
CP000282_1568 1/1 286 351 .. 1 87 [] 42.6 9.5e-12
CP000282_2188 1/1 204 270 .. 1 87 [] 40.9 3e-11
CP000282_2293 1/1 230 289 .. 1 79 [. 39.4 8e-11
CP000282_1724 1/2 209 256 .. 1 66 [. 35.0 1.4e-09
CP000282_0660 1/1 682 751 .. 1 87 [] 31.7 1.2e-08
CP000282_2915 1/1 199 265 .. 1 87 [] 30.6 2.4e-08
CP000282_0262 1/1 257 325 .. 1 87 [] 30.5 2.7e-08

Alignments of top-scoring domains:
CP000282_3643: domain 1 of 1, from 252 to 317: score 103.8, E = 4.3e-29
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+f+a++sHE+RTP+++++g++e+L++ t+l++ q
CP000282_3 252 AKSQFIATMSHEIRTPMNGVIGMVEMLRD---------TTLDDSQ-- 287

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r yl +i+r++++l ++ind+Ld+s+ieag
CP000282_3 288 ----------RHYLGIIERSGDSLMNIINDILDYSKIEAG 317

CP000282_2236: domain 1 of 1, from 271 to 336: score 95.8, E = 8.1e-27
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
kseflan sHE+RTPL++I+g++elL++ tel+ +q
CP000282_2 271 VKSEFLANTSHEIRTPLNGILGFSELLRK---------TELNNQQ-- 306

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+yl ti+++a+ ll +ind+Ld+sr+e g
CP000282_2 307 ----------VDYLTTIEESAKGLLTIINDILDFSRLEIG 336

CP000282_1407: domain 1 of 1, from 303 to 369: score 91.1, E = 1.8e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aksefl+++sHELRTPL+aI+g+a+l + d +l++ q
CP000282_1 303 AKSEFLSSMSHELRTPLNAILGFAQLFEL--------DKNLNPAQ-- 339

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re + i++++++ll+Li d+Ldl++ieag
CP000282_1 340 ----------RENIGEIEKAGKHLLELIGDVLDLAKIEAG 369

CP000282_3112: domain 1 of 1, from 198 to 263: score 90.9, E = 2e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
akseflan+sHE+RTP+++++g+++++l +e s+e+
CP000282_3 198 AKSEFLANMSHEIRTPMNGVIGMLDVALL---------SETSPEK-- 233

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++yl++++++a++ll +ind+Ld+s+ eag
CP000282_3 234 ----------HRYLSVARNSAQSLLGIINDILDFSKVEAG 263

CP000282_3113: domain 1 of 1, from 1005 to 1070: score 90.4, E = 2.9e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ksefla++sHE+RTPL++++g++ l ++ t l ++q
CP000282_3 1005 TKSEFLAMMSHEIRTPLNGVLGMLNLVKR---------TQLEDKQ-- 1040

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r +++++++ae+ll+Lind+Ld+s+ +ag
CP000282_3 1041 ----------RYQIDIAKSSAESLLNLINDILDFSKVDAG 1070

CP000282_0404: domain 1 of 1, from 271 to 338: score 88.9, E = 7.3e-25
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+flan+sHELRTPL++I+g+++ +l+ + ++l+e q
CP000282_0 271 AKSDFLANMSHELRTPLNSIIGFSKRILKTQ-------ENLDERQ-- 308

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l +i r++e+ll+Lind+Ldl++i+ag
CP000282_0 309 ----------VHSLGVISRSGEHLLQLINDVLDLTKIDAG 338

CP000282_0264: domain 1 of 1, from 144 to 209: score 86.0, E = 5e-24
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k++fla+lsHELRTPLt+I+gy+elLl+ ++++++
CP000282_0 144 SKNRFLAHLSHELRTPLTSILGYTELLLN---------SDKGAQA-- 179

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l++i+r +++ll+L+nd+Ldls+i a
CP000282_0 180 ----------AVELDVIYRNGKHLLNLLNDVLDLSKIAAD 209

CP000282_2911: domain 1 of 1, from 404 to 470: score 83.2, E = 3.1e-23
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
ak+ fla++sHE+RTP++aI+gya++L d++ ++ +
CP000282_2 404 AKTTFLATMSHEIRTPMNAILGYAQILTS--------DADIPDSH-- 440

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l+ i+ ++++ll+L+nd+Ld+++ie+g
CP000282_2 441 ----------QDTLKAIEGAGKHLLSLLNDVLDITKIESG 470

CP000282_0665: domain 1 of 1, from 871 to 939: score 80.9, E = 1.4e-22
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+eflan sHELRTPL++I g+ae L +++ ++ls ++
CP000282_0 871 LKDEFLANTSHELRTPLNGIVGLAESLMDGVT------GPLSHKT-- 909

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l i ++++rl L++dlLd++++ +
CP000282_0 910 ----------KQNLAMIVSSGKRLAGLVDDLLDFAQLKHR 939

CP000282_2904: domain 1 of 1, from 387 to 454: score 77.5, E = 1.3e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k++flan+sHELRTPL+aI+g++ Ll+ + + l +q
CP000282_2 387 VKTDFLANMSHELRTPLNAIIGFTVRLLK-------KKDQLQNQQ-- 424

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ e+i+r +++ll++ind+Ldls+iea+
CP000282_2 425 ----------VNAMEVIERNGRHLLAMINDILDLSKIEAN 454

CP000282_3830: domain 1 of 1, from 205 to 271: score 75.8, E = 3.9e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ +f+an+sHELRTPLt++rgy+e+L + + s + +
CP000282_3 205 MRKDFVANVSHELRTPLTVVRGYIETLSD----------APSIPPA- 240

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++++l ++ + +r+ +Lindl +l+++e+
CP000282_3 241 ---------WARALTAMQGQCQRMTALINDLITLTKLETD 271

CP000282_2484: domain 1 of 1, from 418 to 483: score 75.3, E = 5.3e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aksefla +sHE+RTP+++++g++ l l+ + l++eq
CP000282_2 418 AKSEFLACMSHEIRTPMNGVLGMLGLVLN---------SSLTPEQ-- 453

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ l +++++++ll+ ind+Ld+s+ eag
CP000282_2 454 ----------ERKLLLAQSSGQSLLSVINDILDYSKVEAG 483

CP000282_2969: domain 1 of 1, from 671 to 737: score 74.7, E = 8.1e-21
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
aks+ l ++sHELR PL++++gya+l+++ d++lse
CP000282_2 671 AKSRYLTGISHELRSPLNTVLGYAQLMEM--------DSALSEAN-- 707

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + +i+r++e+l +Li+ lLd+s+ieag
CP000282_2 708 ----------QNKIAVIKRSGEHLADLIEGLLDISKIEAG 737

CP000282_3129: domain 1 of 1, from 162 to 230: score 73.0, E = 2.4e-20
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+k+ef+a +sHELRTPL+ I+gya L+++l + +eq
CP000282_3 162 SKDEFFALMSHELRTPLNPIIGYATRLEKKL-------GSELDEQ-- 199

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yr +++i++ +e+llrLin + dl ++eag
CP000282_3 200 ---------YRTVIRSIKSNGESLLRLINHIIDLGKLEAG 230

CP000282_3695: domain 1 of 1, from 281 to 349: score 66.4, E = 1.8e-18
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ e+l+++sH+LRTPL++++gy+e+ ++ ++ls eq+
CP000282_3 281 LRKELLSHVSHDLRTPLASLLGYLETWEM-------NKDTLSTEQT- 319

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ y++t++r a+ ++rL+++l +l+ ++ g
CP000282_3 320 ----------ELYISTAKRNAQKISRLVEQLFELAYLDGG 349

CP000282_3204: domain 1 of 1, from 620 to 688: score 62.0, E = 3.1e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ ++sH+L+ PL +I g+a++L ++l +++++q
CP000282_3 620 EMEQFIYTVSHDLKSPLVTIGGFAKMLSTGLA------NTATDKQ-- 658

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ l++i+ +++++ L++dlL+lsr+ +
CP000282_3 659 ----------KHQLQRIQANVDHMETLLSDLLQLSRLIRQ 688

CP000282_2550: domain 1 of 1, from 309 to 375: score 61.5, E = 4.3e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++a+++HE R+PL aI +a+lL+e +++ ++ +
CP000282_2 309 SLGRLTASIAHEVRNPLGAIAHAAQLLKE--------SETIDAGD-- 345

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+++e+il+ +er +++in+ L lsr ++
CP000282_2 346 ----------NRLTEIILQHSERVNQIINNTLILSRRKEP 375

CP000282_3108: domain 1 of 1, from 247 to 315: score 61.1, E = 5.4e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
a+++f a + HELRTPL+aI+g++++Ll ++ ++l+e +
CP000282_3 247 ARRDFYAKMMHELRTPLNAIIGFSDVLLWRSA------AKLDERD-- 285

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+l+ i+ ++ +l+++i d Ld+s+ieag
CP000282_3 286 ----------NTALRNIKVAGIQLNEMITDTLDISKIEAG 315

CP000282_1945: domain 1 of 1, from 245 to 311: score 60.4, E = 8.7e-17
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++s f a+++HELRTPLt + + +++ l ++++ e+
CP000282_1 245 RLSHFSADIAHELRTPLTNLATQTQVGLG---------QARTLEE-- 280

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
yre+l + l+e erl +++nd+L l++ e+g
CP000282_1 281 ---------YRELLYSNLEEQERLTKMVNDMLWLAQSENG 311

CP000282_0500: domain 1 of 1, from 129 to 186: score 60.2, E = 1e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++++HE+++PL +Irg+a+lL + el +e++
CP000282_0 129 TSRNLIRSMAHEIKNPLGGIRGAAQLLSR----------ELQDEDL- 164

peLRledpeyreyletilreaerllrLindlL<-*
ey+++i++e++rl++L++++L
CP000282_0 165 ----------DEYTRIIIDETDRLRNLVDRML 186

CP000282_2719: domain 1 of 2, from 258 to 322: score 59.6, E = 1.4e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++a++sHE+RTPL++I++ +e +++ + + + q
CP000282_2 258 SRRQWVADISHEMRTPLAVIKAQIESMQD---------GIRQPSQ-- 293

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l +++ +++l++L+ndl +ls + g
CP000282_2 294 -----------ANLALLKDKTDSLNALVNDLYELSLSDLG 322

CP000282_2440: domain 1 of 1, from 243 to 308: score 58.3, E = 3.4e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++f + +sHELRTP+t+I +elL+ ls++q
CP000282_2 243 HERRFSREVSHELRTPVTSIHVSLELLES---------MSLSPQQ-- 278

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+++++i+r+ + +++Li+ +L l r
CP000282_2 279 ----------RRLVDRIERANNEMSHLIQTFLLLGRDTLD 308

CP000282_0291: domain 1 of 1, from 207 to 272: score 57.3, E = 6.6e-16
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +lsHEL+TPL+ +r+ ++L e + s+ +
CP000282_0 207 DNKLLSNALSHELKTPLARLRFGFDMLAE---------EQDSARK-- 242

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++y+++i ++++ ++++in lLd++r+++
CP000282_0 243 ----------QQYTHRINEDLNEMQSIINALLDYARLDSV 272

CP000282_3375: domain 1 of 1, from 529 to 597: score 56.6, E = 1.1e-15
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
k+ fla +sHELRTPL++I+g++ +l+ + ++ +++++
CP000282_3 529 VKTNFLACMSHELRTPLNSIIGFSVRCLK-------ILSPSHDQKLI 568

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ + +i+r +++ll Lind+Ldl++ eag
CP000282_3 569 TA-----------ITVIERNGQHLLGLINDVLDLAKVEAG 597

CP000282_0551: domain 1 of 1, from 208 to 273: score 52.3, E = 1.7e-14
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +e++ ++sHELRTPL+ +++++ ++ e te +
CP000282_0 208 SHREMTYAVSHELRTPLARMKFALTMASE---------TEDKTKL-- 243

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
re l ++++++ +++L+n+lL ++ e+g
CP000282_0 244 ----------REHLASVREDVSDMDALVNQLLSYAGFEHG 273

CP000282_1013: domain 1 of 1, from 465 to 530: score 45.5, E = 1.4e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++ + + lsHELRTPL+ +r ++ L+ +ls e
CP000282_1 465 YLRTLSSKLSHELRTPLAIVRSSLDNLEH---------VKLSKEA-- 500

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ y e++++ + rl++++n + sr e+
CP000282_1 501 ----------KVYAERAREGTLRLSSILNSMSAASRVEQA 530

CP000282_2627: domain 1 of 1, from 546 to 614: score 45.5, E = 1.5e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++ f+ +sH+L P+ I+ + elL++ + ++lse
CP000282_2 546 ELQSFAYVASHDLQEPVRKIQSFGELLER------EEKANLSENG-- 584

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ yl+++ ++aer+++Li+ lL+lsr + +
CP000282_2 585 ----------QLYLSRMVSAAERMRSLISSLLELSRVGKE 614

CP000282_3430: domain 1 of 1, from 222 to 284: score 45.5, E = 1.5e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ s+f +++sHELRTPLt I+ ++ l++ + ls+
CP000282_3 222 RESQFNRDVSHELRTPLTEILNTLALAQQ---------QSLSANS-- 257

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
++ i ++a+ + +++ lL l+r+e+
CP000282_3 258 -------------VQHITHAANNIKHIVTTLLALARAETT 284

CP000282_3365: domain 1 of 1, from 761 to 826: score 42.9, E = 8.2e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ ++++a+++HE+ +P+t+I +a+ ++ ++ ++e
CP000282_3 761 SIGRLAAGVAHEIGNPVTGIACLAQNMKY---------ETDDPEI-- 796

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ + il++++r +r++ l +s ++++
CP000282_3 797 ----------LDTAQQILSQTDRVSRIVHSLVSFSHAGQQ 826

CP000282_1568: domain 1 of 1, from 286 to 351: score 42.6, E = 9.5e-12
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ e+l++++H+LR+PL a+ ++++L+ l +e+
CP000282_1 286 QIKELLSGAAHDLRQPLQAMAIFVDMLQF----------QLEDEK-- 320

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
y ++e+++ + + l+++ d+Ld+sr+++
CP000282_1 321 ---------YLNLTEKLKAAMHNLQAMFTDILDFSRLDHK 351

CP000282_2188: domain 1 of 1, from 204 to 270: score 40.9, E = 3e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++++++l+H++RTPL+a ++ya L + + ++
CP000282_2 204 SMGKMVSALAHQIRTPLSAAILYAGHLTN---------GSIAQAKK- 240

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+ +++l +++++r ++d++ + + e +
CP000282_2 241 ----------DTFAKKLLGRLQHMERTVRDMMLFVKSELP 270

CP000282_2293: domain 1 of 1, from 230 to 289: score 39.4, E = 8e-11
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ s+fl+n+sHELRTP++ Ir + ++++ + ++ ++
CP000282_2 230 RESQFLRNASHELRTPIAIIRNAMDVIEY--------KRKINDNKL- 267

peLRledpeyreyletilreaerllrLindlL<-*
+l++i+r+++++ + + +L
CP000282_2 268 ----------DPLLQRIRRAGDSMKSVTEAIL 289

CP000282_1724: domain 1 of 2, from 209 to 256: score 35.0, E = 1.4e-09
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+++e++a+l+HE+++PL++I+ +++ +++++ +++l++ q
CP000282_1 209 SLGELAAGLAHEINNPLAVILNNVQNIERRV------SPTLPANQ-- 247

peLRledpeyreyletilr<-*
+++l+ ++
CP000282_1 248 ----------EKALQANID 256

CP000282_0660: domain 1 of 1, from 682 to 751: score 31.7, E = 1.2e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ +sH+L PL ++++++ L+ + +++ ls+e+
CP000282_0 682 ELERFVYVASHDLQEPLRKVIAFSSHLESNI-----KREQLSDED-- 721

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
l +i + a r+++Li d+L ls
CP000282_0 722 ----------WFVLGRIVDGASRMRDLITDMLRLSHVTKA 751

CP000282_2915: domain 1 of 1, from 199 to 265: score 30.6, E = 2.4e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
+ +f+a+++H+LR+P+ +I+g+a++ + ++ +++ r
CP000282_2 199 RIKKFAAYVAHDLRNPIGSIIGLAQMGTK---------PTTTDKRR- 235

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
+le+il a l+ +n lL+ + + +g
CP000282_2 236 ----------ISILEKILPTATTALEFVNSLLENAALSSG 265

CP000282_0262: domain 1 of 1, from 257 to 325: score 30.5, E = 2.7e-08
*->akseflanlsHELRTPLtaIrgyaelLleeldkvlagdtelseeqrl
++++f+ +sH+L PL I ++++ + +++ + l+e+
CP000282_0 257 ELEDFAFVASHDLQEPLRKICTFSDRMNKKYA------EQLDEKG-- 295

peLRledpeyreyletilreaerllrLindlLdlsrieag<-*
r+yl ++ +a r++ Li +lL++sri++
CP000282_0 296 ----------RDYLVRLNGAATRMSVLIHNLLEFSRIRTR 325


Histogram of all scores:
score obs exp (one = represents 14 sequences)
----- --- ---
-14 4 0|=
-13 27 3|*=
-12 186 91|======*=======
-11 409 475|============================== *
-10 697 881|================================================== *
-9 797 910|========================================================= *
-8 680 681|================================================*
-7 468 429|==============================*===
-6 319 247|=================*=====
-5 155 135|=========*==
-4 89 72|=====*=
-3 51 38|==*=
-2 30 20|=*=
-1 22 10|*=
0 10 5|*
1 6 2|*
2 4 1|*
3 3 0|=
4 1 0|=
5 0 0|
6 1 0|=
7 1 0|=
8 0 0|
9 0 0|
10 3 0|=
11 0 0|
12 2 0|=
13 2 0|=
14 1 0|=
> 15 40 -|===


% Statistical details of theoretical EVD fit:
mu = -8.9758
lambda = 0.6525
chi-sq statistic = 215.2932
P(chi-square) = 4.247e-309

Total sequences searched: 4008

Whole sequence top hits:
tophits_s report:
Total hits: 36
Satisfying E cutoff: 36
Total memory: 22K

Domain top hits:
tophits_s report:
Total hits: 36
Satisfying E cutoff: 36
Total memory: 35K


Acknowledgements:

This research is funded by:

Developed by: